EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000012351 (Gene tree)
Gene ID: 101613445
Gene Symbol: Smg7
Alias: 9430023P16Rik
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 78568 bases
Position: chrJH725464.1:15134923-15213490
Accession: 101613445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000008110	EST1	PF10374.9	6.3e-25	1	1
ENSJJAP00000008110	EST1_DNA_bind	PF10373.9	1.5e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000014534	-	3696	XM_004658720	ENSJJAP00000008110	1138 (aa)	XP_004658777	UPI0003331E1E

Gene Model

Click here to download ENSJJAG00000012351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000012351's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000012351	Smg7	99	95.499	ENSG00000116698	SMG7	100	96.561	Homo_sapiens
ENSJJAG00000012351	Smg7	72	70.615	ENSAPOG00000009611	smg7	91	71.212	Acanthochromis_polyacanthus
ENSJJAG00000012351	Smg7	96	90.480	ENSAMEG00000002357	SMG7	100	90.393	Ailuropoda_melanoleuca
ENSJJAG00000012351	Smg7	97	60.497	ENSACIG00000015152	smg7	97	68.037	Amphilophus_citrinellus
ENSJJAG00000012351	Smg7	99	64.992	ENSAOCG00000013538	smg7	99	65.350	Amphiprion_ocellaris
ENSJJAG00000012351	Smg7	99	64.938	ENSAPEG00000007851	smg7	99	65.296	Amphiprion_percula
ENSJJAG00000012351	Smg7	99	62.459	ENSATEG00000006931	smg7	99	63.033	Anabas_testudineus
ENSJJAG00000012351	Smg7	100	80.453	ENSAPLG00000015811	SMG7	100	80.453	Anas_platyrhynchos
ENSJJAG00000012351	Smg7	100	83.459	ENSACAG00000014989	SMG7	100	83.793	Anolis_carolinensis
ENSJJAG00000012351	Smg7	97	95.467	ENSANAG00000028114	SMG7	100	91.821	Aotus_nancymaae
ENSJJAG00000012351	Smg7	99	64.046	ENSACLG00000022079	smg7	99	64.983	Astatotilapia_calliptera
ENSJJAG00000012351	Smg7	99	66.583	ENSAMXG00000020809	smg7	99	66.360	Astyanax_mexicanus
ENSJJAG00000012351	Smg7	99	94.616	ENSBTAG00000008003	SMG7	97	94.616	Bos_taurus
ENSJJAG00000012351	Smg7	99	95.318	ENSCJAG00000005135	SMG7	97	95.318	Callithrix_jacchus
ENSJJAG00000012351	Smg7	99	94.351	ENSCAFG00000013276	SMG7	97	94.263	Canis_familiaris
ENSJJAG00000012351	Smg7	99	94.351	ENSCAFG00020015475	SMG7	97	94.263	Canis_lupus_dingo
ENSJJAG00000012351	Smg7	99	94.797	ENSCHIG00000018192	SMG7	99	94.797	Capra_hircus
ENSJJAG00000012351	Smg7	99	94.881	ENSTSYG00000002667	SMG7	97	94.881	Carlito_syrichta
ENSJJAG00000012351	Smg7	99	94.528	ENSCPOG00000008906	SMG7	99	93.645	Cavia_porcellus
ENSJJAG00000012351	Smg7	100	87.690	ENSCCAG00000028596	SMG7	100	91.608	Cebus_capucinus
ENSJJAG00000012351	Smg7	99	95.587	ENSCATG00000011063	SMG7	97	95.587	Cercocebus_atys
ENSJJAG00000012351	Smg7	100	94.917	ENSCLAG00000010751	SMG7	100	94.917	Chinchilla_lanigera
ENSJJAG00000012351	Smg7	99	95.410	ENSCSAG00000012654	SMG7	97	95.410	Chlorocebus_sabaeus
ENSJJAG00000012351	Smg7	92	86.819	ENSCHOG00000010522	SMG7	93	87.202	Choloepus_hoffmanni
ENSJJAG00000012351	Smg7	100	87.059	ENSCPBG00000015724	SMG7	100	87.059	Chrysemys_picta_bellii
ENSJJAG00000012351	Smg7	96	91.616	ENSCANG00000015680	SMG7	100	91.616	Colobus_angolensis_palliatus
ENSJJAG00000012351	Smg7	100	95.088	ENSCGRG00001013705	Smg7	100	95.088	Cricetulus_griseus_chok1gshd
ENSJJAG00000012351	Smg7	99	94.965	ENSCGRG00000018401	Smg7	99	94.965	Cricetulus_griseus_crigri
ENSJJAG00000012351	Smg7	95	69.000	ENSCVAG00000011842	smg7	98	69.000	Cyprinodon_variegatus
ENSJJAG00000012351	Smg7	99	66.112	ENSDARG00000060767	smg7	99	66.195	Danio_rerio
ENSJJAG00000012351	Smg7	100	94.741	ENSDORG00000007331	Smg7	100	94.741	Dipodomys_ordii
ENSJJAG00000012351	Smg7	97	93.750	ENSETEG00000002654	SMG7	100	93.750	Echinops_telfairi
ENSJJAG00000012351	Smg7	100	95.443	ENSEASG00005006524	SMG7	100	95.443	Equus_asinus_asinus
ENSJJAG00000012351	Smg7	100	95.530	ENSECAG00000004313	SMG7	100	95.530	Equus_caballus
ENSJJAG00000012351	Smg7	97	94.118	ENSEEUG00000002024	SMG7	94	94.118	Erinaceus_europaeus
ENSJJAG00000012351	Smg7	99	64.657	ENSELUG00000010293	smg7	99	64.575	Esox_lucius
ENSJJAG00000012351	Smg7	100	94.917	ENSFCAG00000010900	SMG7	100	95.857	Felis_catus
ENSJJAG00000012351	Smg7	98	82.128	ENSFALG00000003047	SMG7	100	82.128	Ficedula_albicollis
ENSJJAG00000012351	Smg7	99	94.728	ENSFDAG00000012121	SMG7	99	95.094	Fukomys_damarensis
ENSJJAG00000012351	Smg7	99	61.526	ENSFHEG00000011073	smg7	99	61.526	Fundulus_heteroclitus
ENSJJAG00000012351	Smg7	96	56.533	ENSGMOG00000004916	smg7	92	67.690	Gadus_morhua
ENSJJAG00000012351	Smg7	100	81.224	ENSGALG00000004667	SMG7	100	81.224	Gallus_gallus
ENSJJAG00000012351	Smg7	99	60.913	ENSGAFG00000019000	smg7	99	60.830	Gambusia_affinis
ENSJJAG00000012351	Smg7	97	64.336	ENSGACG00000001634	smg7	99	65.122	Gasterosteus_aculeatus
ENSJJAG00000012351	Smg7	99	95.587	ENSGGOG00000002342	SMG7	97	95.587	Gorilla_gorilla
ENSJJAG00000012351	Smg7	99	64.046	ENSHBUG00000003726	smg7	97	72.081	Haplochromis_burtoni
ENSJJAG00000012351	Smg7	98	95.009	ENSHGLG00000009353	SMG7	100	95.009	Heterocephalus_glaber_female
ENSJJAG00000012351	Smg7	98	93.316	ENSHGLG00100009637	-	100	93.316	Heterocephalus_glaber_male
ENSJJAG00000012351	Smg7	100	87.292	ENSHGLG00100004878	-	100	87.292	Heterocephalus_glaber_male
ENSJJAG00000012351	Smg7	99	66.807	ENSIPUG00000016997	smg7	99	66.975	Ictalurus_punctatus
ENSJJAG00000012351	Smg7	100	96.319	ENSSTOG00000000401	SMG7	100	96.319	Ictidomys_tridecemlineatus
ENSJJAG00000012351	Smg7	97	58.489	ENSKMAG00000004900	smg7	96	70.000	Kryptolebias_marmoratus
ENSJJAG00000012351	Smg7	99	62.250	ENSLBEG00000002983	smg7	99	62.333	Labrus_bergylta
ENSJJAG00000012351	Smg7	99	74.783	ENSLACG00000000972	SMG7	99	74.935	Latimeria_chalumnae
ENSJJAG00000012351	Smg7	99	67.193	ENSLOCG00000002010	smg7	99	67.276	Lepisosteus_oculatus
ENSJJAG00000012351	Smg7	99	95.230	ENSLAFG00000008186	SMG7	99	95.230	Loxodonta_africana
ENSJJAG00000012351	Smg7	100	95.793	ENSMFAG00000031653	SMG7	100	95.793	Macaca_fascicularis
ENSJJAG00000012351	Smg7	99	95.587	ENSMMUG00000018458	SMG7	97	95.587	Macaca_mulatta
ENSJJAG00000012351	Smg7	100	87.784	ENSMNEG00000034798	SMG7	100	91.703	Macaca_nemestrina
ENSJJAG00000012351	Smg7	99	95.587	ENSMLEG00000037170	SMG7	97	95.587	Mandrillus_leucophaeus
ENSJJAG00000012351	Smg7	88	64.060	ENSMAMG00000018733	smg7	84	64.813	Mastacembelus_armatus
ENSJJAG00000012351	Smg7	99	64.397	ENSMZEG00005015247	smg7	99	64.901	Maylandia_zebra
ENSJJAG00000012351	Smg7	99	81.033	ENSMGAG00000001561	SMG7	99	81.033	Meleagris_gallopavo
ENSJJAG00000012351	Smg7	100	95.351	ENSMAUG00000019484	Smg7	100	95.351	Mesocricetus_auratus
ENSJJAG00000012351	Smg7	99	95.675	ENSMICG00000007145	SMG7	99	95.057	Microcebus_murinus
ENSJJAG00000012351	Smg7	100	95.175	ENSMOCG00000020748	Smg7	100	95.175	Microtus_ochrogaster
ENSJJAG00000012351	Smg7	99	60.485	ENSMMOG00000001524	smg7	99	60.604	Mola_mola
ENSJJAG00000012351	Smg7	92	84.149	ENSMODG00000007139	SMG7	99	84.149	Monodelphis_domestica
ENSJJAG00000012351	Smg7	96	68.159	ENSMALG00000000061	smg7	91	69.154	Monopterus_albus
ENSJJAG00000012351	Smg7	100	95.088	MGP_CAROLIEiJ_G0014704	Smg7	100	94.825	Mus_caroli
ENSJJAG00000012351	Smg7	100	95.000	ENSMUSG00000042772	Smg7	100	95.000	Mus_musculus
ENSJJAG00000012351	Smg7	100	95.088	MGP_PahariEiJ_G0027940	Smg7	100	95.088	Mus_pahari
ENSJJAG00000012351	Smg7	100	95.088	MGP_SPRETEiJ_G0015511	Smg7	100	95.088	Mus_spretus
ENSJJAG00000012351	Smg7	98	94.296	ENSMPUG00000011732	SMG7	97	94.207	Mustela_putorius_furo
ENSJJAG00000012351	Smg7	99	94.440	ENSMLUG00000015417	SMG7	99	94.440	Myotis_lucifugus
ENSJJAG00000012351	Smg7	99	95.495	ENSNGAG00000009836	Smg7	99	94.876	Nannospalax_galili
ENSJJAG00000012351	Smg7	98	56.965	ENSNBRG00000024343	smg7	98	69.668	Neolamprologus_brichardi
ENSJJAG00000012351	Smg7	99	95.587	ENSNLEG00000018018	SMG7	97	95.587	Nomascus_leucogenys
ENSJJAG00000012351	Smg7	77	84.866	ENSMEUG00000004681	SMG7	77	85.077	Notamacropus_eugenii
ENSJJAG00000012351	Smg7	96	83.744	ENSOPRG00000013942	SMG7	96	83.470	Ochotona_princeps
ENSJJAG00000012351	Smg7	100	95.092	ENSODEG00000010390	SMG7	100	95.092	Octodon_degus
ENSJJAG00000012351	Smg7	99	61.166	ENSONIG00000000277	smg7	99	62.158	Oreochromis_niloticus
ENSJJAG00000012351	Smg7	98	89.628	ENSOANG00000000994	SMG7	100	89.716	Ornithorhynchus_anatinus
ENSJJAG00000012351	Smg7	99	88.261	ENSOCUG00000005887	SMG7	92	88.438	Oryctolagus_cuniculus
ENSJJAG00000012351	Smg7	99	61.730	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSJJAG00000012351	Smg7	99	62.063	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSJJAG00000012351	Smg7	99	63.879	ENSORLG00015012289	smg7	99	62.230	Oryzias_latipes_hsok
ENSJJAG00000012351	Smg7	99	62.396	ENSOMEG00000002328	smg7	99	62.479	Oryzias_melastigma
ENSJJAG00000012351	Smg7	97	93.563	ENSOGAG00000003107	SMG7	94	93.472	Otolemur_garnettii
ENSJJAG00000012351	Smg7	99	94.969	ENSOARG00000001352	SMG7	97	94.969	Ovis_aries
ENSJJAG00000012351	Smg7	100	87.869	ENSPPAG00000031619	SMG7	100	91.790	Pan_paniscus
ENSJJAG00000012351	Smg7	99	94.969	ENSPPRG00000011222	SMG7	97	94.881	Panthera_pardus
ENSJJAG00000012351	Smg7	96	94.713	ENSPTIG00000007242	SMG7	100	91.004	Panthera_tigris_altaica
ENSJJAG00000012351	Smg7	97	95.743	ENSPTRG00000001764	SMG7	100	91.790	Pan_troglodytes
ENSJJAG00000012351	Smg7	99	95.587	ENSPANG00000004520	SMG7	97	95.587	Papio_anubis
ENSJJAG00000012351	Smg7	99	63.721	ENSPKIG00000007242	smg7	99	69.307	Paramormyrops_kingsleyae
ENSJJAG00000012351	Smg7	99	90.115	ENSPSIG00000012201	SMG7	99	90.026	Pelodiscus_sinensis
ENSJJAG00000012351	Smg7	54	56.500	ENSPMGG00000021833	smg7	89	54.500	Periophthalmus_magnuspinnatus
ENSJJAG00000012351	Smg7	100	94.737	ENSPEMG00000011315	Smg7	100	94.737	Peromyscus_maniculatus_bairdii
ENSJJAG00000012351	Smg7	100	88.805	ENSPCIG00000003786	SMG7	92	97.576	Phascolarctos_cinereus
ENSJJAG00000012351	Smg7	99	63.140	ENSPFOG00000019219	smg7	99	63.254	Poecilia_formosa
ENSJJAG00000012351	Smg7	99	61.028	ENSPLAG00000001446	smg7	99	60.862	Poecilia_latipinna
ENSJJAG00000012351	Smg7	96	60.137	ENSPMEG00000005218	smg7	99	59.966	Poecilia_mexicana
ENSJJAG00000012351	Smg7	87	60.057	ENSPREG00000019039	smg7	91	60.246	Poecilia_reticulata
ENSJJAG00000012351	Smg7	100	87.869	ENSPPYG00000000427	SMG7	100	87.869	Pongo_abelii
ENSJJAG00000012351	Smg7	89	91.187	ENSPCAG00000008360	SMG7	88	91.187	Procavia_capensis
ENSJJAG00000012351	Smg7	99	95.852	ENSPCOG00000011996	SMG7	97	95.852	Propithecus_coquereli
ENSJJAG00000012351	Smg7	92	89.484	ENSPVAG00000000851	SMG7	89	89.484	Pteropus_vampyrus
ENSJJAG00000012351	Smg7	99	63.905	ENSPNYG00000007643	smg7	99	64.842	Pundamilia_nyererei
ENSJJAG00000012351	Smg7	99	66.611	ENSPNAG00000011374	smg7	98	70.707	Pygocentrus_nattereri
ENSJJAG00000012351	Smg7	100	95.092	ENSRNOG00000027962	Smg7	100	95.364	Rattus_norvegicus
ENSJJAG00000012351	Smg7	99	95.499	ENSRBIG00000036316	SMG7	97	95.499	Rhinopithecus_bieti
ENSJJAG00000012351	Smg7	100	95.618	ENSRROG00000035719	SMG7	100	95.618	Rhinopithecus_roxellana
ENSJJAG00000012351	Smg7	100	95.614	ENSSBOG00000023454	SMG7	100	95.614	Saimiri_boliviensis_boliviensis
ENSJJAG00000012351	Smg7	100	84.188	ENSSHAG00000013147	SMG7	100	84.188	Sarcophilus_harrisii
ENSJJAG00000012351	Smg7	91	76.316	ENSSFOG00015017252	smg7	99	76.316	Scleropages_formosus
ENSJJAG00000012351	Smg7	99	64.725	ENSSMAG00000006067	smg7	99	64.867	Scophthalmus_maximus
ENSJJAG00000012351	Smg7	95	71.607	ENSSDUG00000017543	smg7	99	62.131	Seriola_dumerili
ENSJJAG00000012351	Smg7	99	81.472	ENSSPUG00000002064	SMG7	99	81.472	Sphenodon_punctatus
ENSJJAG00000012351	Smg7	100	61.462	ENSSPAG00000008733	smg7	100	61.157	Stegastes_partitus
ENSJJAG00000012351	Smg7	100	95.267	ENSSSCG00000015558	SMG7	100	95.267	Sus_scrofa
ENSJJAG00000012351	Smg7	99	81.250	ENSTGUG00000003928	SMG7	100	81.250	Taeniopygia_guttata
ENSJJAG00000012351	Smg7	99	63.926	ENSTNIG00000002802	smg7	99	63.851	Tetraodon_nigroviridis
ENSJJAG00000012351	Smg7	77	92.373	ENSTBEG00000003220	SMG7	75	92.373	Tupaia_belangeri
ENSJJAG00000012351	Smg7	96	95.160	ENSTTRG00000014778	SMG7	94	95.160	Tursiops_truncatus
ENSJJAG00000012351	Smg7	96	90.537	ENSUAMG00000017473	SMG7	100	90.719	Ursus_americanus
ENSJJAG00000012351	Smg7	96	94.449	ENSUMAG00000016389	SMG7	100	94.359	Ursus_maritimus
ENSJJAG00000012351	Smg7	100	94.566	ENSVVUG00000008976	SMG7	100	94.479	Vulpes_vulpes
ENSJJAG00000012351	Smg7	100	65.420	ENSXETG00000012528	smg7	100	65.557	Xenopus_tropicalis
ENSJJAG00000012351	Smg7	99	60.949	ENSXMAG00000007123	smg7	99	61.000	Xiphophorus_maculatus