EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000012460 (Gene tree)
Gene ID: 101612537
Gene Symbol: -
Alias: -
Full Name: probable ATP-dependent RNA helicase DDX28
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 1629 bases
Position: chrJH725589.1:3157692-3159320
Accession: 101612537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000008257	DEAD	PF00270.29	2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000014681	-	1629	XM_004670726	ENSJJAP00000008257	542 (aa)	XP_004670783	UPI0003331E78

Gene Model

Click here to download ENSJJAG00000012460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000012460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000012460	-	68	31.139	ENSJJAG00000013401	Ddx55	60	31.139
ENSJJAG00000012460	-	72	32.746	ENSJJAG00000000118	Ddx47	78	32.242
ENSJJAG00000012460	-	72	30.000	ENSJJAG00000014269	Ddx56	73	30.332
ENSJJAG00000012460	-	73	30.886	ENSJJAG00000014184	Ddx43	56	30.886
ENSJJAG00000012460	-	67	30.894	ENSJJAG00000017587	Ddx5	55	30.894

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000012460	-	99	80.741	ENSG00000182810	DDX28	99	80.741	Homo_sapiens
ENSJJAG00000012460	-	95	48.654	ENSAPOG00000000991	ddx28	90	48.654	Acanthochromis_polyacanthus
ENSJJAG00000012460	-	99	76.710	ENSAMEG00000019426	DDX28	99	76.710	Ailuropoda_melanoleuca
ENSJJAG00000012460	-	93	48.544	ENSACIG00000021615	ddx28	90	48.544	Amphilophus_citrinellus
ENSJJAG00000012460	-	95	48.654	ENSAOCG00000004610	ddx28	90	48.654	Amphiprion_ocellaris
ENSJJAG00000012460	-	95	48.462	ENSAPEG00000002143	ddx28	90	48.462	Amphiprion_percula
ENSJJAG00000012460	-	96	49.336	ENSATEG00000018691	ddx28	92	49.336	Anabas_testudineus
ENSJJAG00000012460	-	95	53.307	ENSACAG00000009755	DDX28	94	53.307	Anolis_carolinensis
ENSJJAG00000012460	-	93	47.665	ENSACLG00000012984	ddx28	89	47.665	Astatotilapia_calliptera
ENSJJAG00000012460	-	95	48.308	ENSAMXG00000005878	ddx28	92	48.308	Astyanax_mexicanus
ENSJJAG00000012460	-	100	78.229	ENSBTAG00000004290	DDX28	99	78.373	Bos_taurus
ENSJJAG00000012460	-	98	78.719	ENSCAFG00000020327	DDX28	99	78.719	Canis_familiaris
ENSJJAG00000012460	-	98	78.719	ENSCAFG00020019785	DDX28	99	78.719	Canis_lupus_dingo
ENSJJAG00000012460	-	96	79.541	ENSCHIG00000009658	DDX28	99	78.928	Capra_hircus
ENSJJAG00000012460	-	99	75.000	ENSCPOG00000013746	DDX28	99	75.000	Cavia_porcellus
ENSJJAG00000012460	-	99	78.743	ENSCSAG00000018472	DDX28	99	78.743	Chlorocebus_sabaeus
ENSJJAG00000012460	-	89	57.350	ENSCPBG00000012105	DDX28	85	57.968	Chrysemys_picta_bellii
ENSJJAG00000012460	-	67	38.649	ENSCSAVG00000006341	-	93	37.297	Ciona_savignyi
ENSJJAG00000012460	-	97	80.228	ENSCGRG00001024412	Ddx28	100	80.418	Cricetulus_griseus_chok1gshd
ENSJJAG00000012460	-	95	48.369	ENSCSEG00000011651	ddx28	90	48.369	Cynoglossus_semilaevis
ENSJJAG00000012460	-	96	47.778	ENSCVAG00000004044	ddx28	94	47.778	Cyprinodon_variegatus
ENSJJAG00000012460	-	93	47.860	ENSDARG00000060411	ddx28	90	47.860	Danio_rerio
ENSJJAG00000012460	-	68	81.081	ENSDNOG00000033593	DDX28	99	81.081	Dasypus_novemcinctus
ENSJJAG00000012460	-	99	79.298	ENSDORG00000028868	Ddx28	99	79.298	Dipodomys_ordii
ENSJJAG00000012460	-	83	34.273	FBgn0086130	Dbp21E2	82	34.273	Drosophila_melanogaster
ENSJJAG00000012460	-	100	77.675	ENSETEG00000001062	-	100	77.675	Echinops_telfairi
ENSJJAG00000012460	-	82	45.833	ENSEBUG00000004791	ddx28	82	46.114	Eptatretus_burgeri
ENSJJAG00000012460	-	100	80.258	ENSEASG00005020387	DDX28	100	80.258	Equus_asinus_asinus
ENSJJAG00000012460	-	100	80.627	ENSECAG00000006451	DDX28	99	80.776	Equus_caballus
ENSJJAG00000012460	-	77	71.292	ENSEEUG00000005017	DDX28	97	71.292	Erinaceus_europaeus
ENSJJAG00000012460	-	93	49.611	ENSELUG00000005302	ddx28	96	49.611	Esox_lucius
ENSJJAG00000012460	-	99	78.743	ENSFCAG00000012858	DDX28	99	78.743	Felis_catus
ENSJJAG00000012460	-	94	49.515	ENSFHEG00000012573	ddx28	91	49.515	Fundulus_heteroclitus
ENSJJAG00000012460	-	93	48.638	ENSGMOG00000017045	ddx28	95	47.953	Gadus_morhua
ENSJJAG00000012460	-	94	50.191	ENSGALG00000048700	DDX28	89	50.191	Gallus_gallus
ENSJJAG00000012460	-	94	47.692	ENSGAFG00000009249	ddx28	90	47.893	Gambusia_affinis
ENSJJAG00000012460	-	95	48.184	ENSGACG00000016367	ddx28	95	48.184	Gasterosteus_aculeatus
ENSJJAG00000012460	-	81	56.726	ENSGAGG00000004565	DDX28	97	56.319	Gopherus_agassizii
ENSJJAG00000012460	-	99	80.741	ENSGGOG00000001220	DDX28	99	80.741	Gorilla_gorilla
ENSJJAG00000012460	-	93	49.027	ENSHBUG00000001016	ddx28	90	49.027	Haplochromis_burtoni
ENSJJAG00000012460	-	94	47.126	ENSHCOG00000017590	ddx28	92	46.935	Hippocampus_comes
ENSJJAG00000012460	-	94	47.692	ENSIPUG00000017350	Ddx28	90	47.793	Ictalurus_punctatus
ENSJJAG00000012460	-	100	79.705	ENSSTOG00000002064	DDX28	100	79.705	Ictidomys_tridecemlineatus
ENSJJAG00000012460	-	94	46.628	ENSKMAG00000018183	ddx28	90	46.628	Kryptolebias_marmoratus
ENSJJAG00000012460	-	95	48.549	ENSLBEG00000006072	ddx28	91	48.549	Labrus_bergylta
ENSJJAG00000012460	-	93	54.706	ENSLACG00000005578	DDX28	87	54.706	Latimeria_chalumnae
ENSJJAG00000012460	-	94	52.317	ENSLOCG00000017604	ddx28	91	52.317	Lepisosteus_oculatus
ENSJJAG00000012460	-	99	78.558	ENSLAFG00000031239	DDX28	99	78.558	Loxodonta_africana
ENSJJAG00000012460	-	99	78.373	ENSMMUG00000010836	DDX28	99	78.373	Macaca_mulatta
ENSJJAG00000012460	-	95	47.793	ENSMAMG00000020220	ddx28	91	47.793	Mastacembelus_armatus
ENSJJAG00000012460	-	93	49.611	ENSMZEG00005009292	ddx28	90	49.611	Maylandia_zebra
ENSJJAG00000012460	-	96	67.495	ENSMICG00000012346	-	99	66.974	Microcebus_murinus
ENSJJAG00000012460	-	100	80.996	ENSMOCG00000009815	Ddx28	100	80.996	Microtus_ochrogaster
ENSJJAG00000012460	-	98	50.092	ENSMMOG00000000270	ddx28	95	50.092	Mola_mola
ENSJJAG00000012460	-	96	68.208	ENSMODG00000005303	DDX28	95	69.157	Monodelphis_domestica
ENSJJAG00000012460	-	95	48.664	ENSMALG00000008864	ddx28	91	48.664	Monopterus_albus
ENSJJAG00000012460	-	100	79.151	MGP_CAROLIEiJ_G0031510	Ddx28	100	79.151	Mus_caroli
ENSJJAG00000012460	-	100	79.705	ENSMUSG00000045538	Ddx28	100	79.705	Mus_musculus
ENSJJAG00000012460	-	100	79.336	MGP_PahariEiJ_G0023110	Ddx28	100	79.336	Mus_pahari
ENSJJAG00000012460	-	100	79.520	MGP_SPRETEiJ_G0032628	Ddx28	100	79.520	Mus_spretus
ENSJJAG00000012460	-	75	78.025	ENSMPUG00000006915	DDX28	100	78.025	Mustela_putorius_furo
ENSJJAG00000012460	-	98	78.759	ENSMLUG00000005899	DDX28	98	78.759	Myotis_lucifugus
ENSJJAG00000012460	-	96	81.609	ENSNGAG00000015762	Ddx28	99	80.776	Nannospalax_galili
ENSJJAG00000012460	-	93	49.023	ENSNBRG00000001337	ddx28	91	49.023	Neolamprologus_brichardi
ENSJJAG00000012460	-	93	49.611	ENSONIG00000020597	ddx28	90	49.611	Oreochromis_niloticus
ENSJJAG00000012460	-	55	60.606	ENSOANG00000003551	-	99	60.606	Ornithorhynchus_anatinus
ENSJJAG00000012460	-	100	77.306	ENSOCUG00000023074	DDX28	100	77.306	Oryctolagus_cuniculus
ENSJJAG00000012460	-	94	47.093	ENSORLG00000011968	ddx28	92	47.093	Oryzias_latipes
ENSJJAG00000012460	-	94	46.899	ENSORLG00020001951	ddx28	93	46.899	Oryzias_latipes_hni
ENSJJAG00000012460	-	94	46.318	ENSORLG00015023030	ddx28	93	46.318	Oryzias_latipes_hsok
ENSJJAG00000012460	-	97	47.556	ENSOMEG00000012445	ddx28	94	47.556	Oryzias_melastigma
ENSJJAG00000012460	-	98	78.302	ENSOGAG00000016895	DDX28	99	78.044	Otolemur_garnettii
ENSJJAG00000012460	-	82	77.130	ENSOARG00000003313	DDX28	99	77.130	Ovis_aries
ENSJJAG00000012460	-	99	77.037	ENSPPAG00000036971	DDX28	99	77.037	Pan_paniscus
ENSJJAG00000012460	-	99	79.482	ENSPPRG00000018322	DDX28	99	79.482	Panthera_pardus
ENSJJAG00000012460	-	99	76.895	ENSPTIG00000006444	DDX28	99	76.895	Panthera_tigris_altaica
ENSJJAG00000012460	-	99	80.185	ENSPTRG00000008258	DDX28	99	80.185	Pan_troglodytes
ENSJJAG00000012460	-	93	49.130	ENSPKIG00000021200	ddx28	93	49.130	Paramormyrops_kingsleyae
ENSJJAG00000012460	-	54	62.116	ENSPSIG00000001127	DDX28	96	62.116	Pelodiscus_sinensis
ENSJJAG00000012460	-	92	46.746	ENSPMGG00000007908	ddx28	88	46.746	Periophthalmus_magnuspinnatus
ENSJJAG00000012460	-	100	79.779	ENSPEMG00000003395	Ddx28	100	79.779	Peromyscus_maniculatus_bairdii
ENSJJAG00000012460	-	56	47.386	ENSPMAG00000006983	DDX28	96	47.386	Petromyzon_marinus
ENSJJAG00000012460	-	94	47.510	ENSPFOG00000020838	DDX28	90	47.510	Poecilia_formosa
ENSJJAG00000012460	-	94	47.510	ENSPFOG00000020952	ddx28	89	47.510	Poecilia_formosa
ENSJJAG00000012460	-	94	47.510	ENSPLAG00000016292	ddx28	89	47.510	Poecilia_latipinna
ENSJJAG00000012460	-	94	47.510	ENSPMEG00000011311	ddx28	88	47.510	Poecilia_mexicana
ENSJJAG00000012460	-	94	47.683	ENSPREG00000002899	ddx28	88	47.683	Poecilia_reticulata
ENSJJAG00000012460	-	99	80.370	ENSPPYG00000007481	DDX28	100	80.370	Pongo_abelii
ENSJJAG00000012460	-	100	79.926	ENSPCOG00000024632	DDX28	100	79.926	Propithecus_coquereli
ENSJJAG00000012460	-	93	49.611	ENSPNYG00000018804	ddx28	90	49.611	Pundamilia_nyererei
ENSJJAG00000012460	-	93	49.423	ENSPNAG00000014597	ddx28	94	49.423	Pygocentrus_nattereri
ENSJJAG00000012460	-	99	77.819	ENSRNOG00000019817	Ddx28	99	77.819	Rattus_norvegicus
ENSJJAG00000012460	-	93	47.969	ENSSFOG00015010181	ddx28	95	47.407	Scleropages_formosus
ENSJJAG00000012460	-	89	49.495	ENSSMAG00000006831	ddx28	91	49.495	Scophthalmus_maximus
ENSJJAG00000012460	-	93	47.767	ENSSDUG00000003257	ddx28	89	47.767	Seriola_dumerili
ENSJJAG00000012460	-	93	47.379	ENSSLDG00000004513	ddx28	89	47.379	Seriola_lalandi_dorsalis
ENSJJAG00000012460	-	99	76.852	ENSSARG00000014169	DDX28	99	76.852	Sorex_araneus
ENSJJAG00000012460	-	99	48.155	ENSSPAG00000000988	ddx28	95	48.244	Stegastes_partitus
ENSJJAG00000012460	-	99	80.037	ENSSSCG00000026038	DDX28	99	80.037	Sus_scrofa
ENSJJAG00000012460	-	97	48.571	ENSTRUG00000007815	ddx28	95	48.571	Takifugu_rubripes
ENSJJAG00000012460	-	94	48.323	ENSTNIG00000011352	ddx28	99	48.323	Tetraodon_nigroviridis
ENSJJAG00000012460	-	87	84.932	ENSTBEG00000017695	DDX28	87	84.932	Tupaia_belangeri
ENSJJAG00000012460	-	99	78.743	ENSUAMG00000016116	DDX28	99	78.743	Ursus_americanus
ENSJJAG00000012460	-	89	75.670	ENSUMAG00000019200	DDX28	97	75.670	Ursus_maritimus
ENSJJAG00000012460	-	81	75.626	ENSVVUG00000012876	DDX28	87	75.455	Vulpes_vulpes
ENSJJAG00000012460	-	94	47.162	ENSXETG00000005435	ddx28	99	47.162	Xenopus_tropicalis
ENSJJAG00000012460	-	94	48.084	ENSXCOG00000012364	ddx28	90	48.084	Xiphophorus_couchianus
ENSJJAG00000012460	-	93	48.249	ENSXMAG00000019603	ddx28	91	48.249	Xiphophorus_maculatus