EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000012475 (Gene tree)
Gene ID: 101602099
Gene Symbol: R3hdm4
Alias: C030046I01Rik
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 7413 bases
Position: chrJH725451.1:33468189-33475601
Accession: 101602099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000008303	R3H	PF01424.22	9.5e-07	1	1
ENSJJAP00000008301	R3H	PF01424.22	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000014729	-	795	-	ENSJJAP00000008303	264 (aa)	-	-
ENSJJAT00000014727	-	807	XM_004654866	ENSJJAP00000008301	268 (aa)	XP_004654923	UPI000333110D

Gene Model

Click here to download ENSJJAG00000012475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000012475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000012475	R3hdm4	100	89.552	ENSG00000198858	R3HDM4	99	89.552	Homo_sapiens
ENSJJAG00000012475	R3hdm4	92	89.344	ENSAMEG00000003001	R3HDM4	99	89.344	Ailuropoda_melanoleuca
ENSJJAG00000012475	R3hdm4	89	56.596	ENSACIG00000004672	r3hdm4	90	56.596	Amphilophus_citrinellus
ENSJJAG00000012475	R3hdm4	88	54.274	ENSATEG00000015913	r3hdm4	90	54.274	Anabas_testudineus
ENSJJAG00000012475	R3hdm4	92	90.947	ENSANAG00000029748	R3HDM4	99	90.947	Aotus_nancymaae
ENSJJAG00000012475	R3hdm4	100	86.765	ENSBTAG00000046406	R3HDM4	99	86.765	Bos_taurus
ENSJJAG00000012475	R3hdm4	94	89.641	ENSCJAG00000020114	R3HDM4	93	89.641	Callithrix_jacchus
ENSJJAG00000012475	R3hdm4	100	87.132	ENSCAFG00000019665	R3HDM4	99	87.132	Canis_familiaris
ENSJJAG00000012475	R3hdm4	100	86.765	ENSCAFG00020016880	R3HDM4	99	86.765	Canis_lupus_dingo
ENSJJAG00000012475	R3hdm4	100	87.132	ENSCHIG00000020110	R3HDM4	99	87.132	Capra_hircus
ENSJJAG00000012475	R3hdm4	98	85.385	ENSCCAG00000019955	R3HDM4	94	85.385	Cebus_capucinus
ENSJJAG00000012475	R3hdm4	100	86.989	ENSCATG00000037269	R3HDM4	99	88.148	Cercocebus_atys
ENSJJAG00000012475	R3hdm4	92	90.574	ENSCLAG00000007094	R3HDM4	99	90.574	Chinchilla_lanigera
ENSJJAG00000012475	R3hdm4	100	88.806	ENSCSAG00000012574	R3HDM4	99	88.806	Chlorocebus_sabaeus
ENSJJAG00000012475	R3hdm4	99	65.169	ENSCPBG00000009805	R3HDM4	92	68.571	Chrysemys_picta_bellii
ENSJJAG00000012475	R3hdm4	99	87.023	ENSCANG00000040439	R3HDM4	91	87.023	Colobus_angolensis_palliatus
ENSJJAG00000012475	R3hdm4	100	87.687	ENSCGRG00001021650	R3hdm4	100	87.687	Cricetulus_griseus_chok1gshd
ENSJJAG00000012475	R3hdm4	100	87.687	ENSCGRG00000013169	R3hdm4	100	87.687	Cricetulus_griseus_crigri
ENSJJAG00000012475	R3hdm4	89	53.814	ENSCSEG00000018211	r3hdm4	90	53.814	Cynoglossus_semilaevis
ENSJJAG00000012475	R3hdm4	89	55.274	ENSCVAG00000017127	r3hdm4	91	55.508	Cyprinodon_variegatus
ENSJJAG00000012475	R3hdm4	95	89.147	ENSDORG00000006605	R3hdm4	100	91.057	Dipodomys_ordii
ENSJJAG00000012475	R3hdm4	99	86.260	ENSEASG00005021556	R3HDM4	95	87.786	Equus_asinus_asinus
ENSJJAG00000012475	R3hdm4	100	87.823	ENSECAG00000000003	R3HDM4	99	88.930	Equus_caballus
ENSJJAG00000012475	R3hdm4	100	87.778	ENSFCAG00000042437	R3HDM4	99	87.778	Felis_catus
ENSJJAG00000012475	R3hdm4	92	66.529	ENSFALG00000013938	R3HDM4	99	66.529	Ficedula_albicollis
ENSJJAG00000012475	R3hdm4	92	88.571	ENSFDAG00000017040	R3HDM4	99	88.571	Fukomys_damarensis
ENSJJAG00000012475	R3hdm4	99	51.866	ENSFHEG00000017636	r3hdm4	91	55.508	Fundulus_heteroclitus
ENSJJAG00000012475	R3hdm4	89	52.991	ENSGMOG00000001231	r3hdm4	95	53.191	Gadus_morhua
ENSJJAG00000012475	R3hdm4	94	64.202	ENSGALG00000001998	R3HDM4	92	65.432	Gallus_gallus
ENSJJAG00000012475	R3hdm4	89	55.745	ENSGAFG00000004173	r3hdm4	91	55.745	Gambusia_affinis
ENSJJAG00000012475	R3hdm4	96	65.116	ENSGAGG00000019698	R3HDM4	92	67.347	Gopherus_agassizii
ENSJJAG00000012475	R3hdm4	99	86.466	ENSGGOG00000008040	R3HDM4	99	91.393	Gorilla_gorilla
ENSJJAG00000012475	R3hdm4	89	55.274	ENSHBUG00000014810	r3hdm4	90	56.118	Haplochromis_burtoni
ENSJJAG00000012475	R3hdm4	100	86.245	ENSHGLG00000016194	R3HDM4	99	86.245	Heterocephalus_glaber_female
ENSJJAG00000012475	R3hdm4	89	55.319	ENSHCOG00000008422	r3hdm4	90	55.319	Hippocampus_comes
ENSJJAG00000012475	R3hdm4	89	54.894	ENSIPUG00000006716	r3hdm4	90	54.894	Ictalurus_punctatus
ENSJJAG00000012475	R3hdm4	92	89.344	ENSSTOG00000023015	R3HDM4	99	89.344	Ictidomys_tridecemlineatus
ENSJJAG00000012475	R3hdm4	89	55.932	ENSKMAG00000005853	r3hdm4	90	55.932	Kryptolebias_marmoratus
ENSJJAG00000012475	R3hdm4	89	55.319	ENSLBEG00000000730	r3hdm4	90	55.319	Labrus_bergylta
ENSJJAG00000012475	R3hdm4	93	59.184	ENSLACG00000016445	R3HDM4	93	60.331	Latimeria_chalumnae
ENSJJAG00000012475	R3hdm4	93	56.800	ENSLOCG00000002423	r3hdm4	93	56.800	Lepisosteus_oculatus
ENSJJAG00000012475	R3hdm4	97	86.328	ENSLAFG00000017796	R3HDM4	98	86.328	Loxodonta_africana
ENSJJAG00000012475	R3hdm4	100	88.806	ENSMFAG00000044131	R3HDM4	99	88.806	Macaca_fascicularis
ENSJJAG00000012475	R3hdm4	100	81.716	ENSMMUG00000009682	R3HDM4	90	91.031	Macaca_mulatta
ENSJJAG00000012475	R3hdm4	92	90.984	ENSMNEG00000044115	R3HDM4	98	90.984	Macaca_nemestrina
ENSJJAG00000012475	R3hdm4	93	87.449	ENSMLEG00000035693	R3HDM4	91	88.710	Mandrillus_leucophaeus
ENSJJAG00000012475	R3hdm4	77	57.561	ENSMAMG00000005652	r3hdm4	82	57.561	Mastacembelus_armatus
ENSJJAG00000012475	R3hdm4	100	85.075	ENSMAUG00000010611	R3hdm4	100	86.154	Mesocricetus_auratus
ENSJJAG00000012475	R3hdm4	100	89.630	ENSMICG00000010124	R3HDM4	99	89.630	Microcebus_murinus
ENSJJAG00000012475	R3hdm4	100	85.075	ENSMOCG00000002646	R3hdm4	100	85.821	Microtus_ochrogaster
ENSJJAG00000012475	R3hdm4	89	55.085	ENSMMOG00000008253	r3hdm4	91	55.085	Mola_mola
ENSJJAG00000012475	R3hdm4	88	65.517	ENSMODG00000005698	R3HDM4	99	65.517	Monodelphis_domestica
ENSJJAG00000012475	R3hdm4	89	54.894	ENSMALG00000018856	r3hdm4	90	54.894	Monopterus_albus
ENSJJAG00000012475	R3hdm4	100	85.075	MGP_CAROLIEiJ_G0015551	R3hdm4	100	86.567	Mus_caroli
ENSJJAG00000012475	R3hdm4	100	85.448	ENSMUSG00000035781	R3hdm4	100	86.940	Mus_musculus
ENSJJAG00000012475	R3hdm4	100	84.701	MGP_PahariEiJ_G0030964	R3hdm4	100	86.194	Mus_pahari
ENSJJAG00000012475	R3hdm4	100	84.701	MGP_SPRETEiJ_G0016369	-	84	86.194	Mus_spretus
ENSJJAG00000012475	R3hdm4	97	86.434	ENSMPUG00000009394	R3HDM4	94	86.434	Mustela_putorius_furo
ENSJJAG00000012475	R3hdm4	89	55.085	ENSNBRG00000004438	r3hdm4	90	55.696	Neolamprologus_brichardi
ENSJJAG00000012475	R3hdm4	86	89.655	ENSNLEG00000001022	R3HDM4	100	89.655	Nomascus_leucogenys
ENSJJAG00000012475	R3hdm4	90	65.126	ENSMEUG00000011020	R3HDM4	99	65.126	Notamacropus_eugenii
ENSJJAG00000012475	R3hdm4	100	86.989	ENSODEG00000011745	R3HDM4	99	86.989	Octodon_degus
ENSJJAG00000012475	R3hdm4	89	54.852	ENSONIG00000012675	r3hdm4	83	56.410	Oreochromis_niloticus
ENSJJAG00000012475	R3hdm4	89	56.118	ENSOMEG00000003005	r3hdm4	90	56.118	Oryzias_melastigma
ENSJJAG00000012475	R3hdm4	97	87.059	ENSOGAG00000025656	R3HDM4	96	87.059	Otolemur_garnettii
ENSJJAG00000012475	R3hdm4	92	90.984	ENSOARG00000009945	R3HDM4	99	90.984	Ovis_aries
ENSJJAG00000012475	R3hdm4	99	86.842	ENSPPAG00000042371	R3HDM4	99	91.803	Pan_paniscus
ENSJJAG00000012475	R3hdm4	100	88.806	ENSPANG00000015203	R3HDM4	99	88.806	Papio_anubis
ENSJJAG00000012475	R3hdm4	87	56.769	ENSPKIG00000007421	r3hdm4	88	56.223	Paramormyrops_kingsleyae
ENSJJAG00000012475	R3hdm4	93	51.793	ENSPMGG00000020467	r3hdm4	89	53.390	Periophthalmus_magnuspinnatus
ENSJJAG00000012475	R3hdm4	100	84.191	ENSPEMG00000008365	Tmem259	100	91.393	Peromyscus_maniculatus_bairdii
ENSJJAG00000012475	R3hdm4	89	55.319	ENSPFOG00000003199	r3hdm4	91	55.319	Poecilia_formosa
ENSJJAG00000012475	R3hdm4	89	55.319	ENSPMEG00000014183	r3hdm4	91	55.319	Poecilia_mexicana
ENSJJAG00000012475	R3hdm4	89	55.745	ENSPREG00000010709	r3hdm4	91	55.745	Poecilia_reticulata
ENSJJAG00000012475	R3hdm4	100	86.194	ENSPPYG00000009297	R3HDM4	99	86.194	Pongo_abelii
ENSJJAG00000012475	R3hdm4	57	88.158	ENSPCAG00000010997	R3HDM4	55	88.158	Procavia_capensis
ENSJJAG00000012475	R3hdm4	100	88.148	ENSPCOG00000016785	R3HDM4	99	88.148	Propithecus_coquereli
ENSJJAG00000012475	R3hdm4	89	55.274	ENSPNYG00000017489	r3hdm4	90	56.118	Pundamilia_nyererei
ENSJJAG00000012475	R3hdm4	100	85.075	ENSRNOG00000011489	R3hdm4	100	85.821	Rattus_norvegicus
ENSJJAG00000012475	R3hdm4	92	91.803	ENSRROG00000028842	R3HDM4	91	91.803	Rhinopithecus_roxellana
ENSJJAG00000012475	R3hdm4	98	83.712	ENSSBOG00000019298	R3HDM4	72	88.664	Saimiri_boliviensis_boliviensis
ENSJJAG00000012475	R3hdm4	55	70.548	ENSSHAG00000003036	-	99	70.548	Sarcophilus_harrisii
ENSJJAG00000012475	R3hdm4	87	56.957	ENSSFOG00015020574	r3hdm4	83	56.957	Scleropages_formosus
ENSJJAG00000012475	R3hdm4	89	55.319	ENSSMAG00000021090	r3hdm4	67	55.319	Scophthalmus_maximus
ENSJJAG00000012475	R3hdm4	89	56.962	ENSSDUG00000008488	r3hdm4	90	56.962	Seriola_dumerili
ENSJJAG00000012475	R3hdm4	89	56.962	ENSSLDG00000025328	r3hdm4	90	56.962	Seriola_lalandi_dorsalis
ENSJJAG00000012475	R3hdm4	97	64.981	ENSSPUG00000005434	R3HDM4	99	64.981	Sphenodon_punctatus
ENSJJAG00000012475	R3hdm4	89	52.966	ENSSPAG00000002562	r3hdm4	90	52.966	Stegastes_partitus
ENSJJAG00000012475	R3hdm4	100	87.868	ENSSSCG00000013419	R3HDM4	99	87.868	Sus_scrofa
ENSJJAG00000012475	R3hdm4	79	62.381	ENSTGUG00000000663	R3HDM4	100	62.381	Taeniopygia_guttata
ENSJJAG00000012475	R3hdm4	92	85.246	ENSTTRG00000001470	R3HDM4	99	86.885	Tursiops_truncatus
ENSJJAG00000012475	R3hdm4	100	76.471	ENSUAMG00000005751	R3HDM4	99	89.686	Ursus_americanus
ENSJJAG00000012475	R3hdm4	100	87.500	ENSVVUG00000022685	R3HDM4	99	87.500	Vulpes_vulpes
ENSJJAG00000012475	R3hdm4	90	47.257	ENSXETG00000033624	R3HDM4	91	47.257	Xenopus_tropicalis
ENSJJAG00000012475	R3hdm4	89	55.508	ENSXCOG00000005127	r3hdm4	91	55.508	Xiphophorus_couchianus
ENSJJAG00000012475	R3hdm4	89	55.745	ENSXMAG00000022875	r3hdm4	91	55.745	Xiphophorus_maculatus