EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000012679 (Gene tree)
Gene ID: -
Gene Symbol: Rpusd3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 4202 bases
Position: chrJH725441.1:773364-777565
Accession: 101604607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000008568	PseudoU_synth_2	PF00849.22	1.5e-18	1	1
ENSJJAP00000008561	PseudoU_synth_2	PF00849.22	2.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000014999	-	885	-	ENSJJAP00000008568	295 (aa)	-	-
ENSJJAT00000014992	-	1032	XM_004651364	ENSJJAP00000008561	344 (aa)	XP_004651421	-

Gene Model

Click here to download ENSJJAG00000012679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000012679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000012679	Rpusd3	80	30.208	ENSJJAG00000018673	Rpusd4	73	30.314

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000012679	Rpusd3	99	73.235	ENSG00000156990	RPUSD3	95	74.272	Homo_sapiens
ENSJJAG00000012679	Rpusd3	100	71.512	ENSAMEG00000016227	RPUSD3	98	71.512	Ailuropoda_melanoleuca
ENSJJAG00000012679	Rpusd3	91	46.840	ENSACAG00000009836	RPUSD3	80	51.601	Anolis_carolinensis
ENSJJAG00000012679	Rpusd3	87	51.429	ENSANAG00000007127	-	96	52.427	Aotus_nancymaae
ENSJJAG00000012679	Rpusd3	64	75.789	ENSANAG00000019945	-	92	63.347	Aotus_nancymaae
ENSJJAG00000012679	Rpusd3	63	73.797	ENSANAG00000038118	-	89	73.797	Aotus_nancymaae
ENSJJAG00000012679	Rpusd3	100	70.930	ENSBTAG00000007968	RPUSD3	100	70.930	Bos_taurus
ENSJJAG00000012679	Rpusd3	100	71.512	ENSCAFG00000029733	RPUSD3	98	71.512	Canis_familiaris
ENSJJAG00000012679	Rpusd3	100	71.512	ENSCAFG00020008582	RPUSD3	98	71.512	Canis_lupus_dingo
ENSJJAG00000012679	Rpusd3	100	71.221	ENSCHIG00000026027	RPUSD3	100	71.221	Capra_hircus
ENSJJAG00000012679	Rpusd3	99	68.023	ENSTSYG00000009994	RPUSD3	97	68.023	Carlito_syrichta
ENSJJAG00000012679	Rpusd3	76	73.004	ENSCAPG00000017559	RPUSD3	99	73.004	Cavia_aperea
ENSJJAG00000012679	Rpusd3	99	62.682	ENSCPOG00000037956	RPUSD3	90	62.682	Cavia_porcellus
ENSJJAG00000012679	Rpusd3	96	73.414	ENSCCAG00000029530	RPUSD3	95	74.257	Cebus_capucinus
ENSJJAG00000012679	Rpusd3	100	73.547	ENSCATG00000036939	RPUSD3	98	73.547	Cercocebus_atys
ENSJJAG00000012679	Rpusd3	99	73.235	ENSCSAG00000010506	RPUSD3	95	73.235	Chlorocebus_sabaeus
ENSJJAG00000012679	Rpusd3	51	76.786	ENSCHOG00000010151	-	67	76.786	Choloepus_hoffmanni
ENSJJAG00000012679	Rpusd3	74	51.751	ENSCPBG00000008825	RPUSD3	95	53.696	Chrysemys_picta_bellii
ENSJJAG00000012679	Rpusd3	99	73.824	ENSCANG00000040711	RPUSD3	95	74.272	Colobus_angolensis_palliatus
ENSJJAG00000012679	Rpusd3	100	71.802	ENSCGRG00001004923	Rpusd3	95	71.802	Cricetulus_griseus_chok1gshd
ENSJJAG00000012679	Rpusd3	100	71.802	ENSCGRG00000018315	Rpusd3	100	71.802	Cricetulus_griseus_crigri
ENSJJAG00000012679	Rpusd3	96	69.091	ENSDNOG00000039160	RPUSD3	87	69.091	Dasypus_novemcinctus
ENSJJAG00000012679	Rpusd3	76	72.659	ENSDORG00000026827	Rpusd3	92	72.659	Dipodomys_ordii
ENSJJAG00000012679	Rpusd3	99	64.307	ENSETEG00000006538	RPUSD3	96	64.307	Echinops_telfairi
ENSJJAG00000012679	Rpusd3	68	38.235	ENSEBUG00000015605	RPUSD3	66	38.235	Eptatretus_burgeri
ENSJJAG00000012679	Rpusd3	100	71.802	ENSEASG00005014160	RPUSD3	96	71.802	Equus_asinus_asinus
ENSJJAG00000012679	Rpusd3	100	71.221	ENSECAG00000019988	RPUSD3	96	71.221	Equus_caballus
ENSJJAG00000012679	Rpusd3	92	54.037	ENSEEUG00000007353	RPUSD3	91	54.037	Erinaceus_europaeus
ENSJJAG00000012679	Rpusd3	100	70.640	ENSFCAG00000014199	RPUSD3	98	70.640	Felis_catus
ENSJJAG00000012679	Rpusd3	79	49.275	ENSFALG00000012968	RPUSD3	99	49.275	Ficedula_albicollis
ENSJJAG00000012679	Rpusd3	77	72.830	ENSFDAG00000008350	RPUSD3	82	72.830	Fukomys_damarensis
ENSJJAG00000012679	Rpusd3	76	52.091	ENSGAGG00000007493	RPUSD3	82	53.992	Gopherus_agassizii
ENSJJAG00000012679	Rpusd3	99	73.824	ENSGGOG00000013120	RPUSD3	95	75.243	Gorilla_gorilla
ENSJJAG00000012679	Rpusd3	100	58.869	ENSHGLG00000011722	RPUSD3	100	58.869	Heterocephalus_glaber_female
ENSJJAG00000012679	Rpusd3	100	58.869	ENSHGLG00100016038	RPUSD3	100	58.869	Heterocephalus_glaber_male
ENSJJAG00000012679	Rpusd3	100	70.058	ENSSTOG00000002125	RPUSD3	98	70.058	Ictidomys_tridecemlineatus
ENSJJAG00000012679	Rpusd3	99	68.732	ENSLAFG00000017501	RPUSD3	99	68.732	Loxodonta_africana
ENSJJAG00000012679	Rpusd3	100	73.256	ENSMFAG00000032407	RPUSD3	98	73.256	Macaca_fascicularis
ENSJJAG00000012679	Rpusd3	94	75.776	ENSMMUG00000010628	RPUSD3	99	75.776	Macaca_mulatta
ENSJJAG00000012679	Rpusd3	100	73.837	ENSMNEG00000040308	RPUSD3	98	73.837	Macaca_nemestrina
ENSJJAG00000012679	Rpusd3	100	73.837	ENSMLEG00000033940	RPUSD3	98	73.837	Mandrillus_leucophaeus
ENSJJAG00000012679	Rpusd3	100	73.837	ENSMAUG00000015473	Rpusd3	100	73.837	Mesocricetus_auratus
ENSJJAG00000012679	Rpusd3	99	70.206	ENSMICG00000002315	RPUSD3	97	70.206	Microcebus_murinus
ENSJJAG00000012679	Rpusd3	100	72.384	ENSMOCG00000022613	Rpusd3	100	72.384	Microtus_ochrogaster
ENSJJAG00000012679	Rpusd3	98	54.303	ENSMODG00000005210	RPUSD3	88	54.303	Monodelphis_domestica
ENSJJAG00000012679	Rpusd3	100	72.674	MGP_CAROLIEiJ_G0028725	Rpusd3	100	73.881	Mus_caroli
ENSJJAG00000012679	Rpusd3	100	73.256	ENSMUSG00000051169	Rpusd3	100	73.256	Mus_musculus
ENSJJAG00000012679	Rpusd3	100	71.802	MGP_PahariEiJ_G0022476	Rpusd3	99	73.034	Mus_pahari
ENSJJAG00000012679	Rpusd3	100	73.837	MGP_SPRETEiJ_G0029753	Rpusd3	100	74.627	Mus_spretus
ENSJJAG00000012679	Rpusd3	100	69.767	ENSMPUG00000017132	RPUSD3	98	69.767	Mustela_putorius_furo
ENSJJAG00000012679	Rpusd3	100	71.802	ENSMLUG00000006135	RPUSD3	99	71.802	Myotis_lucifugus
ENSJJAG00000012679	Rpusd3	99	73.392	ENSNGAG00000023704	Rpusd3	99	73.392	Nannospalax_galili
ENSJJAG00000012679	Rpusd3	99	61.471	ENSNLEG00000004214	RPUSD3	95	75.243	Nomascus_leucogenys
ENSJJAG00000012679	Rpusd3	76	62.452	ENSMEUG00000013098	-	100	62.452	Notamacropus_eugenii
ENSJJAG00000012679	Rpusd3	97	59.337	ENSOPRG00000002300	RPUSD3	95	59.337	Ochotona_princeps
ENSJJAG00000012679	Rpusd3	77	72.348	ENSODEG00000018137	RPUSD3	91	72.348	Octodon_degus
ENSJJAG00000012679	Rpusd3	83	48.944	ENSOANG00000012081	-	99	48.944	Ornithorhynchus_anatinus
ENSJJAG00000012679	Rpusd3	97	61.176	ENSOCUG00000027885	RPUSD3	97	61.176	Oryctolagus_cuniculus
ENSJJAG00000012679	Rpusd3	92	74.367	ENSOGAG00000012592	RPUSD3	99	74.367	Otolemur_garnettii
ENSJJAG00000012679	Rpusd3	100	72.093	ENSOARG00000005928	RPUSD3	98	72.093	Ovis_aries
ENSJJAG00000012679	Rpusd3	99	72.941	ENSPPAG00000038083	RPUSD3	97	73.684	Pan_paniscus
ENSJJAG00000012679	Rpusd3	99	71.471	ENSPPRG00000024433	RPUSD3	95	71.471	Panthera_pardus
ENSJJAG00000012679	Rpusd3	99	71.471	ENSPTIG00000006828	RPUSD3	98	71.471	Panthera_tigris_altaica
ENSJJAG00000012679	Rpusd3	100	72.674	ENSPTRG00000051760	RPUSD3	98	72.674	Pan_troglodytes
ENSJJAG00000012679	Rpusd3	100	73.547	ENSPANG00000023885	RPUSD3	98	73.547	Papio_anubis
ENSJJAG00000012679	Rpusd3	100	71.802	ENSPEMG00000017245	Rpusd3	100	71.802	Peromyscus_maniculatus_bairdii
ENSJJAG00000012679	Rpusd3	85	59.727	ENSPCIG00000021901	RPUSD3	85	59.727	Phascolarctos_cinereus
ENSJJAG00000012679	Rpusd3	99	73.235	ENSPPYG00000013676	RPUSD3	95	73.235	Pongo_abelii
ENSJJAG00000012679	Rpusd3	90	51.812	ENSPCAG00000013731	-	96	52.899	Procavia_capensis
ENSJJAG00000012679	Rpusd3	99	73.746	ENSPCOG00000018314	RPUSD3	96	73.746	Propithecus_coquereli
ENSJJAG00000012679	Rpusd3	100	69.477	ENSPVAG00000011107	RPUSD3	98	69.477	Pteropus_vampyrus
ENSJJAG00000012679	Rpusd3	100	66.860	ENSRNOG00000009084	Rpusd3	100	66.860	Rattus_norvegicus
ENSJJAG00000012679	Rpusd3	98	74.481	ENSRBIG00000041230	RPUSD3	95	74.757	Rhinopithecus_bieti
ENSJJAG00000012679	Rpusd3	98	74.481	ENSRROG00000043328	RPUSD3	95	74.757	Rhinopithecus_roxellana
ENSJJAG00000012679	Rpusd3	96	73.112	ENSSBOG00000036106	RPUSD3	95	73.112	Saimiri_boliviensis_boliviensis
ENSJJAG00000012679	Rpusd3	90	55.195	ENSSHAG00000015536	RPUSD3	99	55.195	Sarcophilus_harrisii
ENSJJAG00000012679	Rpusd3	100	69.767	ENSSSCG00000011555	RPUSD3	98	69.767	Sus_scrofa
ENSJJAG00000012679	Rpusd3	68	50.644	ENSTGUG00000008744	RPUSD3	95	50.000	Taeniopygia_guttata
ENSJJAG00000012679	Rpusd3	91	68.953	ENSTBEG00000000176	RPUSD3	94	69.314	Tupaia_belangeri
ENSJJAG00000012679	Rpusd3	100	70.640	ENSTTRG00000007544	RPUSD3	98	70.640	Tursiops_truncatus
ENSJJAG00000012679	Rpusd3	89	75.410	ENSUAMG00000011354	RPUSD3	95	75.410	Ursus_americanus
ENSJJAG00000012679	Rpusd3	100	70.930	ENSUMAG00000018830	RPUSD3	98	70.930	Ursus_maritimus
ENSJJAG00000012679	Rpusd3	100	72.384	ENSVVUG00000023735	RPUSD3	100	72.384	Vulpes_vulpes
ENSJJAG00000012679	Rpusd3	81	47.687	ENSXETG00000023546	rpusd3	99	47.687	Xenopus_tropicalis