EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000013075 (Gene tree)
Gene ID: -
Gene Symbol: R3hcc1
Alias: 1700020M16Rik
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 8148 bases
Position: chrJH725521.1:689445-697592
Accession: 101601749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000009092	R3H	PF01424.22	2.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000015534	-	1398	XM_012950461	ENSJJAP00000009092	465 (aa)	XP_012805915	-

Gene Model

Click here to download ENSJJAG00000013075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000013075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000013075	R3hcc1	100	70.538	ENSG00000104679	R3HCC1	100	93.023	Homo_sapiens
ENSJJAG00000013075	R3hcc1	63	46.452	ENSAPOG00000003616	r3hcc1	65	46.104	Acanthochromis_polyacanthus
ENSJJAG00000013075	R3hcc1	99	66.885	ENSAMEG00000002963	R3HCC1	90	66.885	Ailuropoda_melanoleuca
ENSJJAG00000013075	R3hcc1	97	33.477	ENSACIG00000017144	r3hcc1	84	37.671	Amphilophus_citrinellus
ENSJJAG00000013075	R3hcc1	59	48.252	ENSAOCG00000003945	r3hcc1	97	31.828	Amphiprion_ocellaris
ENSJJAG00000013075	R3hcc1	94	34.773	ENSAPEG00000003613	r3hcc1	97	31.828	Amphiprion_percula
ENSJJAG00000013075	R3hcc1	59	43.709	ENSATEG00000023860	r3hcc1	52	63.265	Anabas_testudineus
ENSJJAG00000013075	R3hcc1	100	71.828	ENSANAG00000036169	R3HCC1	95	70.753	Aotus_nancymaae
ENSJJAG00000013075	R3hcc1	100	67.377	ENSBTAG00000025830	R3HCC1	97	66.098	Bos_taurus
ENSJJAG00000013075	R3hcc1	100	69.032	ENSCJAG00000020118	R3HCC1	100	60.215	Callithrix_jacchus
ENSJJAG00000013075	R3hcc1	99	64.924	ENSCAFG00000009210	R3HCC1	94	62.527	Canis_familiaris
ENSJJAG00000013075	R3hcc1	85	61.832	ENSCAFG00020012870	R3HCC1	86	58.779	Canis_lupus_dingo
ENSJJAG00000013075	R3hcc1	100	62.422	ENSCHIG00000009107	R3HCC1	100	63.753	Capra_hircus
ENSJJAG00000013075	R3hcc1	100	71.398	ENSTSYG00000000511	R3HCC1	77	70.538	Carlito_syrichta
ENSJJAG00000013075	R3hcc1	90	58.974	ENSCAPG00000015813	R3HCC1	99	55.116	Cavia_aperea
ENSJJAG00000013075	R3hcc1	99	66.879	ENSCPOG00000009696	R3HCC1	99	63.347	Cavia_porcellus
ENSJJAG00000013075	R3hcc1	100	70.323	ENSCCAG00000037811	R3HCC1	100	61.505	Cebus_capucinus
ENSJJAG00000013075	R3hcc1	88	93.478	ENSCATG00000032971	R3HCC1	100	93.478	Cercocebus_atys
ENSJJAG00000013075	R3hcc1	99	69.063	ENSCLAG00000015556	R3HCC1	83	69.063	Chinchilla_lanigera
ENSJJAG00000013075	R3hcc1	100	70.323	ENSCSAG00000016250	R3HCC1	92	67.742	Chlorocebus_sabaeus
ENSJJAG00000013075	R3hcc1	99	65.517	ENSCHOG00000000396	R3HCC1	96	64.871	Choloepus_hoffmanni
ENSJJAG00000013075	R3hcc1	100	69.892	ENSCANG00000029441	R3HCC1	100	61.505	Colobus_angolensis_palliatus
ENSJJAG00000013075	R3hcc1	99	73.045	ENSCGRG00001014977	R3hcc1	99	71.869	Cricetulus_griseus_chok1gshd
ENSJJAG00000013075	R3hcc1	99	73.045	ENSCGRG00000004454	R3hcc1	99	71.869	Cricetulus_griseus_crigri
ENSJJAG00000013075	R3hcc1	64	48.408	ENSCSEG00000005748	r3hcc1	56	50.000	Cynoglossus_semilaevis
ENSJJAG00000013075	R3hcc1	83	31.250	ENSCVAG00000002640	r3hcc1	63	40.230	Cyprinodon_variegatus
ENSJJAG00000013075	R3hcc1	65	45.517	ENSDARG00000099593	r3hcc1	75	45.517	Danio_rerio
ENSJJAG00000013075	R3hcc1	100	67.957	ENSDNOG00000007168	R3HCC1	92	67.957	Dasypus_novemcinctus
ENSJJAG00000013075	R3hcc1	99	66.802	ENSDORG00000026365	R3hcc1	99	66.194	Dipodomys_ordii
ENSJJAG00000013075	R3hcc1	100	59.355	ENSETEG00000001147	R3HCC1	97	57.996	Echinops_telfairi
ENSJJAG00000013075	R3hcc1	99	69.935	ENSEASG00005018782	R3HCC1	79	68.627	Equus_asinus_asinus
ENSJJAG00000013075	R3hcc1	99	69.935	ENSECAG00000025013	R3HCC1	96	68.845	Equus_caballus
ENSJJAG00000013075	R3hcc1	100	66.667	ENSEEUG00000011918	R3HCC1	96	65.376	Erinaceus_europaeus
ENSJJAG00000013075	R3hcc1	93	34.676	ENSELUG00000023650	r3hcc1	98	34.091	Esox_lucius
ENSJJAG00000013075	R3hcc1	99	68.627	ENSFCAG00000012395	R3HCC1	95	68.410	Felis_catus
ENSJJAG00000013075	R3hcc1	99	64.557	ENSFDAG00000001572	R3HCC1	99	63.425	Fukomys_damarensis
ENSJJAG00000013075	R3hcc1	63	37.241	ENSGMOG00000017590	-	82	37.415	Gadus_morhua
ENSJJAG00000013075	R3hcc1	97	33.769	ENSGAFG00000008747	-	66	44.444	Gambusia_affinis
ENSJJAG00000013075	R3hcc1	97	33.478	ENSGACG00000008447	r3hcc1	95	31.064	Gasterosteus_aculeatus
ENSJJAG00000013075	R3hcc1	100	69.247	ENSGGOG00000013817	R3HCC1	100	92.391	Gorilla_gorilla
ENSJJAG00000013075	R3hcc1	99	67.457	ENSHGLG00000010517	R3HCC1	92	66.314	Heterocephalus_glaber_female
ENSJJAG00000013075	R3hcc1	99	67.457	ENSHGLG00100006388	R3HCC1	92	66.314	Heterocephalus_glaber_male
ENSJJAG00000013075	R3hcc1	63	44.218	ENSHCOG00000011745	r3hcc1	70	44.218	Hippocampus_comes
ENSJJAG00000013075	R3hcc1	97	34.858	ENSIPUG00000024504	r3hcc1	87	34.641	Ictalurus_punctatus
ENSJJAG00000013075	R3hcc1	85	81.325	ENSSTOG00000027130	R3HCC1	83	81.325	Ictidomys_tridecemlineatus
ENSJJAG00000013075	R3hcc1	92	33.102	ENSKMAG00000000286	r3hcc1	98	31.473	Kryptolebias_marmoratus
ENSJJAG00000013075	R3hcc1	97	35.230	ENSLOCG00000015442	r3hcc1	71	47.887	Lepisosteus_oculatus
ENSJJAG00000013075	R3hcc1	99	64.449	ENSLAFG00000016137	R3HCC1	95	64.449	Loxodonta_africana
ENSJJAG00000013075	R3hcc1	88	93.478	ENSMFAG00000032894	R3HCC1	100	93.478	Macaca_fascicularis
ENSJJAG00000013075	R3hcc1	100	70.753	ENSMMUG00000016655	R3HCC1	100	62.366	Macaca_mulatta
ENSJJAG00000013075	R3hcc1	88	93.478	ENSMNEG00000043283	R3HCC1	100	93.478	Macaca_nemestrina
ENSJJAG00000013075	R3hcc1	88	93.478	ENSMLEG00000030147	R3HCC1	100	93.478	Mandrillus_leucophaeus
ENSJJAG00000013075	R3hcc1	92	32.110	ENSMAMG00000018146	r3hcc1	98	32.798	Mastacembelus_armatus
ENSJJAG00000013075	R3hcc1	99	43.644	ENSMGAG00000001356	R3HCC1	92	42.526	Meleagris_gallopavo
ENSJJAG00000013075	R3hcc1	99	72.956	ENSMAUG00000016096	R3hcc1	99	72.327	Mesocricetus_auratus
ENSJJAG00000013075	R3hcc1	100	70.538	ENSMICG00000011146	R3HCC1	94	70.538	Microcebus_murinus
ENSJJAG00000013075	R3hcc1	99	69.512	ENSMOCG00000018508	R3hcc1	99	69.715	Microtus_ochrogaster
ENSJJAG00000013075	R3hcc1	92	30.115	ENSMALG00000000731	r3hcc1	85	45.578	Monopterus_albus
ENSJJAG00000013075	R3hcc1	99	68.889	MGP_CAROLIEiJ_G0019467	R3hcc1	99	68.952	Mus_caroli
ENSJJAG00000013075	R3hcc1	99	68.687	ENSMUSG00000034194	R3hcc1	99	67.944	Mus_musculus
ENSJJAG00000013075	R3hcc1	99	66.000	MGP_PahariEiJ_G0030484	R3hcc1	99	66.000	Mus_pahari
ENSJJAG00000013075	R3hcc1	99	68.273	MGP_SPRETEiJ_G0020359	R3hcc1	99	67.535	Mus_spretus
ENSJJAG00000013075	R3hcc1	99	66.885	ENSMPUG00000003457	R3HCC1	86	66.885	Mustela_putorius_furo
ENSJJAG00000013075	R3hcc1	99	68.330	ENSMLUG00000000266	R3HCC1	91	66.811	Myotis_lucifugus
ENSJJAG00000013075	R3hcc1	100	76.824	ENSNGAG00000016747	R3hcc1	100	77.730	Nannospalax_galili
ENSJJAG00000013075	R3hcc1	91	69.668	ENSNLEG00000015944	R3HCC1	85	69.668	Nomascus_leucogenys
ENSJJAG00000013075	R3hcc1	98	52.070	ENSMEUG00000010587	R3HCC1	97	49.576	Notamacropus_eugenii
ENSJJAG00000013075	R3hcc1	100	62.661	ENSOPRG00000013390	R3HCC1	95	62.232	Ochotona_princeps
ENSJJAG00000013075	R3hcc1	98	62.322	ENSODEG00000007529	R3HCC1	99	61.924	Octodon_degus
ENSJJAG00000013075	R3hcc1	99	65.870	ENSOCUG00000023554	R3HCC1	84	64.783	Oryctolagus_cuniculus
ENSJJAG00000013075	R3hcc1	92	31.702	ENSORLG00000016816	r3hcc1	80	44.295	Oryzias_latipes
ENSJJAG00000013075	R3hcc1	92	31.702	ENSORLG00020012005	r3hcc1	71	44.295	Oryzias_latipes_hni
ENSJJAG00000013075	R3hcc1	61	42.767	ENSORLG00015007018	r3hcc1	71	44.966	Oryzias_latipes_hsok
ENSJJAG00000013075	R3hcc1	92	32.019	ENSOMEG00000000816	r3hcc1	70	44.138	Oryzias_melastigma
ENSJJAG00000013075	R3hcc1	100	66.882	ENSOGAG00000001291	R3HCC1	92	66.667	Otolemur_garnettii
ENSJJAG00000013075	R3hcc1	100	66.953	ENSOARG00000010146	R3HCC1	96	65.665	Ovis_aries
ENSJJAG00000013075	R3hcc1	100	70.323	ENSPPAG00000033165	R3HCC1	100	69.247	Pan_paniscus
ENSJJAG00000013075	R3hcc1	100	68.817	ENSPPRG00000002522	R3HCC1	100	68.602	Panthera_pardus
ENSJJAG00000013075	R3hcc1	92	66.744	ENSPTIG00000011230	R3HCC1	95	66.353	Panthera_tigris_altaica
ENSJJAG00000013075	R3hcc1	100	71.183	ENSPTRG00000020076	R3HCC1	100	64.301	Pan_troglodytes
ENSJJAG00000013075	R3hcc1	88	93.478	ENSPANG00000000453	R3HCC1	100	93.478	Papio_anubis
ENSJJAG00000013075	R3hcc1	60	50.336	ENSPKIG00000014426	-	76	50.336	Paramormyrops_kingsleyae
ENSJJAG00000013075	R3hcc1	100	71.429	ENSPEMG00000007118	R3hcc1	99	71.340	Peromyscus_maniculatus_bairdii
ENSJJAG00000013075	R3hcc1	91	48.131	ENSPCIG00000022718	-	84	47.140	Phascolarctos_cinereus
ENSJJAG00000013075	R3hcc1	97	33.626	ENSPFOG00000022301	r3hcc1	66	43.590	Poecilia_formosa
ENSJJAG00000013075	R3hcc1	97	33.898	ENSPLAG00000010794	r3hcc1	66	43.590	Poecilia_latipinna
ENSJJAG00000013075	R3hcc1	97	33.626	ENSPMEG00000022515	r3hcc1	66	43.590	Poecilia_mexicana
ENSJJAG00000013075	R3hcc1	93	68.677	ENSPPYG00000018436	R3HCC1	100	67.517	Pongo_abelii
ENSJJAG00000013075	R3hcc1	69	79.268	ENSPCAG00000012229	R3HCC1	70	79.268	Procavia_capensis
ENSJJAG00000013075	R3hcc1	100	69.677	ENSPCOG00000027554	R3HCC1	100	68.817	Propithecus_coquereli
ENSJJAG00000013075	R3hcc1	100	69.099	ENSPVAG00000009829	R3HCC1	96	68.240	Pteropus_vampyrus
ENSJJAG00000013075	R3hcc1	62	44.218	ENSPNAG00000023875	r3hcc1	74	45.070	Pygocentrus_nattereri
ENSJJAG00000013075	R3hcc1	99	68.432	ENSRNOG00000016777	AABR07018321.1	82	68.228	Rattus_norvegicus
ENSJJAG00000013075	R3hcc1	100	70.538	ENSRBIG00000028045	R3HCC1	100	69.462	Rhinopithecus_bieti
ENSJJAG00000013075	R3hcc1	100	70.538	ENSRROG00000031126	R3HCC1	100	62.151	Rhinopithecus_roxellana
ENSJJAG00000013075	R3hcc1	100	70.323	ENSSBOG00000022590	R3HCC1	100	69.462	Saimiri_boliviensis_boliviensis
ENSJJAG00000013075	R3hcc1	50	89.286	ENSSHAG00000016526	-	55	84.946	Sarcophilus_harrisii
ENSJJAG00000013075	R3hcc1	91	35.529	ENSSFOG00015013507	r3hcc1	71	48.366	Scleropages_formosus
ENSJJAG00000013075	R3hcc1	92	32.045	ENSSMAG00000008647	r3hcc1	98	32.265	Scophthalmus_maximus
ENSJJAG00000013075	R3hcc1	50	78.417	ENSSARG00000013514	-	53	78.417	Sorex_araneus
ENSJJAG00000013075	R3hcc1	94	33.933	ENSSPAG00000013497	r3hcc1	69	47.403	Stegastes_partitus
ENSJJAG00000013075	R3hcc1	99	69.717	ENSSSCG00000039915	-	92	69.063	Sus_scrofa
ENSJJAG00000013075	R3hcc1	100	61.290	ENSSSCG00000037347	-	90	60.645	Sus_scrofa
ENSJJAG00000013075	R3hcc1	58	44.697	ENSTRUG00000015880	r3hcc1	66	44.697	Takifugu_rubripes
ENSJJAG00000013075	R3hcc1	98	62.939	ENSTTRG00000012247	R3HCC1	94	62.092	Tursiops_truncatus
ENSJJAG00000013075	R3hcc1	99	65.795	ENSUAMG00000007344	R3HCC1	98	65.795	Ursus_americanus
ENSJJAG00000013075	R3hcc1	99	65.795	ENSVVUG00000005056	R3HCC1	94	63.617	Vulpes_vulpes