EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000013325 (Gene tree)
Gene ID: 101604386
Gene Symbol: Pop1
Alias: 4932434G09Rik
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 37037 bases
Position: chrJH725492.1:13571686-13608722
Accession: 101604386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000009466	POP1	PF06978.11	7.4e-37	1	2
ENSJJAP00000009466	POP1	PF06978.11	7.4e-37	2	2
ENSJJAP00000009466	POPLD	PF08170.12	1.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000015914	-	2928	XM_004663053	ENSJJAP00000009466	975 (aa)	XP_004663110	-

Gene Model

Click here to download ENSJJAG00000013325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000013325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000013325	Pop1	100	78.516	ENSG00000104356	POP1	100	87.978	Homo_sapiens
ENSJJAG00000013325	Pop1	100	47.338	ENSAPOG00000008198	pop1	100	46.887	Acanthochromis_polyacanthus
ENSJJAG00000013325	Pop1	100	72.842	ENSAMEG00000000556	POP1	100	72.842	Ailuropoda_melanoleuca
ENSJJAG00000013325	Pop1	100	45.965	ENSACIG00000004169	POP1	100	45.768	Amphilophus_citrinellus
ENSJJAG00000013325	Pop1	100	46.453	ENSAOCG00000010991	pop1	100	46.744	Amphiprion_ocellaris
ENSJJAG00000013325	Pop1	91	46.064	ENSAPEG00000007607	pop1	96	46.334	Amphiprion_percula
ENSJJAG00000013325	Pop1	100	45.821	ENSATEG00000024814	POP1	100	45.761	Anabas_testudineus
ENSJJAG00000013325	Pop1	92	59.617	ENSAPLG00000014418	POP1	100	59.388	Anas_platyrhynchos
ENSJJAG00000013325	Pop1	99	52.813	ENSACAG00000016083	POP1	100	52.770	Anolis_carolinensis
ENSJJAG00000013325	Pop1	90	86.944	ENSANAG00000026360	POP1	99	86.944	Aotus_nancymaae
ENSJJAG00000013325	Pop1	100	47.456	ENSACLG00000010951	pop1	100	47.358	Astatotilapia_calliptera
ENSJJAG00000013325	Pop1	100	44.685	ENSAMXG00000014483	POP1	100	44.685	Astyanax_mexicanus
ENSJJAG00000013325	Pop1	100	72.468	ENSBTAG00000012596	POP1	100	72.933	Bos_taurus
ENSJJAG00000013325	Pop1	100	77.441	ENSCJAG00000015567	POP1	100	77.441	Callithrix_jacchus
ENSJJAG00000013325	Pop1	100	74.875	ENSCAFG00000000469	POP1	100	74.875	Canis_familiaris
ENSJJAG00000013325	Pop1	100	74.336	ENSCAFG00020026765	POP1	100	74.336	Canis_lupus_dingo
ENSJJAG00000013325	Pop1	100	72.211	ENSCHIG00000017066	POP1	100	72.790	Capra_hircus
ENSJJAG00000013325	Pop1	100	75.684	ENSTSYG00000003097	POP1	100	75.684	Carlito_syrichta
ENSJJAG00000013325	Pop1	100	71.053	ENSCAPG00000007251	POP1	100	72.016	Cavia_aperea
ENSJJAG00000013325	Pop1	100	73.555	ENSCPOG00000002901	POP1	100	74.533	Cavia_porcellus
ENSJJAG00000013325	Pop1	100	76.465	ENSCCAG00000018939	POP1	100	76.465	Cebus_capucinus
ENSJJAG00000013325	Pop1	100	79.303	ENSCATG00000040916	POP1	100	79.303	Cercocebus_atys
ENSJJAG00000013325	Pop1	100	75.910	ENSCLAG00000007208	POP1	97	75.910	Chinchilla_lanigera
ENSJJAG00000013325	Pop1	90	77.549	ENSCSAG00000012340	POP1	99	77.549	Chlorocebus_sabaeus
ENSJJAG00000013325	Pop1	95	72.119	ENSCHOG00000011432	POP1	100	72.119	Choloepus_hoffmanni
ENSJJAG00000013325	Pop1	100	61.759	ENSCPBG00000006373	POP1	100	61.759	Chrysemys_picta_bellii
ENSJJAG00000013325	Pop1	100	78.905	ENSCANG00000001647	POP1	100	78.905	Colobus_angolensis_palliatus
ENSJJAG00000013325	Pop1	100	75.148	ENSCGRG00001017308	Pop1	100	75.148	Cricetulus_griseus_chok1gshd
ENSJJAG00000013325	Pop1	100	69.724	ENSCGRG00000010824	Pop1	100	69.724	Cricetulus_griseus_crigri
ENSJJAG00000013325	Pop1	100	43.756	ENSCSEG00000008737	POP1	100	44.046	Cynoglossus_semilaevis
ENSJJAG00000013325	Pop1	100	47.001	ENSCVAG00000022248	pop1	100	47.001	Cyprinodon_variegatus
ENSJJAG00000013325	Pop1	100	71.103	ENSDNOG00000019974	POP1	100	71.103	Dasypus_novemcinctus
ENSJJAG00000013325	Pop1	100	66.634	ENSDORG00000015384	Pop1	100	67.223	Dipodomys_ordii
ENSJJAG00000013325	Pop1	88	64.561	ENSETEG00000007839	POP1	88	64.561	Echinops_telfairi
ENSJJAG00000013325	Pop1	51	40.421	ENSEBUG00000009897	pop1	96	40.421	Eptatretus_burgeri
ENSJJAG00000013325	Pop1	100	76.008	ENSEASG00005003189	POP1	98	76.008	Equus_asinus_asinus
ENSJJAG00000013325	Pop1	100	75.910	ENSECAG00000024236	POP1	100	75.910	Equus_caballus
ENSJJAG00000013325	Pop1	67	67.857	ENSEEUG00000003050	-	70	67.857	Erinaceus_europaeus
ENSJJAG00000013325	Pop1	100	46.237	ENSELUG00000003526	pop1	100	46.857	Esox_lucius
ENSJJAG00000013325	Pop1	100	76.031	ENSFCAG00000002168	POP1	100	76.031	Felis_catus
ENSJJAG00000013325	Pop1	100	57.629	ENSFALG00000005711	POP1	100	57.490	Ficedula_albicollis
ENSJJAG00000013325	Pop1	100	76.787	ENSFDAG00000017068	POP1	100	76.787	Fukomys_damarensis
ENSJJAG00000013325	Pop1	100	46.086	ENSFHEG00000019518	pop1	100	46.282	Fundulus_heteroclitus
ENSJJAG00000013325	Pop1	94	44.582	ENSGMOG00000000659	POP1	99	44.229	Gadus_morhua
ENSJJAG00000013325	Pop1	100	46.397	ENSGAFG00000019770	POP1	100	46.086	Gambusia_affinis
ENSJJAG00000013325	Pop1	100	43.378	ENSGACG00000003499	pop1	100	43.090	Gasterosteus_aculeatus
ENSJJAG00000013325	Pop1	100	60.802	ENSGAGG00000011737	POP1	98	61.220	Gopherus_agassizii
ENSJJAG00000013325	Pop1	100	77.734	ENSGGOG00000003176	POP1	100	78.320	Gorilla_gorilla
ENSJJAG00000013325	Pop1	100	47.554	ENSHBUG00000021583	pop1	100	46.848	Haplochromis_burtoni
ENSJJAG00000013325	Pop1	100	75.562	ENSHGLG00000006029	POP1	100	75.562	Heterocephalus_glaber_female
ENSJJAG00000013325	Pop1	100	75.562	ENSHGLG00100016879	POP1	100	75.562	Heterocephalus_glaber_male
ENSJJAG00000013325	Pop1	90	48.321	ENSHCOG00000013888	pop1	96	47.996	Hippocampus_comes
ENSJJAG00000013325	Pop1	100	44.082	ENSIPUG00000018336	pop1	91	60.241	Ictalurus_punctatus
ENSJJAG00000013325	Pop1	100	76.885	ENSSTOG00000011455	POP1	97	76.885	Ictidomys_tridecemlineatus
ENSJJAG00000013325	Pop1	100	45.339	ENSKMAG00000001346	POP1	100	45.259	Kryptolebias_marmoratus
ENSJJAG00000013325	Pop1	88	47.098	ENSLBEG00000024457	POP1	95	46.937	Labrus_bergylta
ENSJJAG00000013325	Pop1	93	54.218	ENSLACG00000012498	POP1	99	53.933	Latimeria_chalumnae
ENSJJAG00000013325	Pop1	100	48.155	ENSLOCG00000009817	POP1	100	48.635	Lepisosteus_oculatus
ENSJJAG00000013325	Pop1	100	75.636	ENSLAFG00000010770	POP1	100	75.636	Loxodonta_africana
ENSJJAG00000013325	Pop1	100	79.303	ENSMFAG00000000347	POP1	100	79.303	Macaca_fascicularis
ENSJJAG00000013325	Pop1	100	79.005	ENSMNEG00000036870	POP1	100	79.005	Macaca_nemestrina
ENSJJAG00000013325	Pop1	100	79.204	ENSMLEG00000034986	POP1	100	79.204	Mandrillus_leucophaeus
ENSJJAG00000013325	Pop1	100	46.394	ENSMAMG00000004040	pop1	100	46.680	Mastacembelus_armatus
ENSJJAG00000013325	Pop1	100	47.456	ENSMZEG00005025448	pop1	100	47.358	Maylandia_zebra
ENSJJAG00000013325	Pop1	100	55.439	ENSMGAG00000012167	POP1	100	55.661	Meleagris_gallopavo
ENSJJAG00000013325	Pop1	100	74.286	ENSMAUG00000017537	Pop1	100	73.892	Mesocricetus_auratus
ENSJJAG00000013325	Pop1	100	78.320	ENSMICG00000004361	POP1	100	78.320	Microcebus_murinus
ENSJJAG00000013325	Pop1	100	73.050	ENSMOCG00000006356	Pop1	100	73.346	Microtus_ochrogaster
ENSJJAG00000013325	Pop1	100	42.460	ENSMMOG00000018242	pop1	100	42.460	Mola_mola
ENSJJAG00000013325	Pop1	100	64.050	ENSMODG00000006561	POP1	100	64.826	Monodelphis_domestica
ENSJJAG00000013325	Pop1	100	47.024	ENSMALG00000012621	POP1	100	47.317	Monopterus_albus
ENSJJAG00000013325	Pop1	100	75.320	MGP_CAROLIEiJ_G0019726	Pop1	100	75.320	Mus_caroli
ENSJJAG00000013325	Pop1	100	75.221	ENSMUSG00000022325	Pop1	100	75.221	Mus_musculus
ENSJJAG00000013325	Pop1	100	74.827	MGP_PahariEiJ_G0019735	Pop1	100	74.827	Mus_pahari
ENSJJAG00000013325	Pop1	100	74.730	MGP_SPRETEiJ_G0020622	Pop1	100	74.730	Mus_spretus
ENSJJAG00000013325	Pop1	100	74.830	ENSMPUG00000015250	POP1	100	74.830	Mustela_putorius_furo
ENSJJAG00000013325	Pop1	100	71.373	ENSMLUG00000010204	POP1	100	71.373	Myotis_lucifugus
ENSJJAG00000013325	Pop1	100	79.686	ENSNGAG00000001582	Pop1	100	79.686	Nannospalax_galili
ENSJJAG00000013325	Pop1	88	47.845	ENSNBRG00000002356	pop1	94	47.817	Neolamprologus_brichardi
ENSJJAG00000013325	Pop1	100	78.607	ENSNLEG00000002541	POP1	100	78.607	Nomascus_leucogenys
ENSJJAG00000013325	Pop1	89	70.370	ENSMEUG00000003118	POP1	92	70.370	Notamacropus_eugenii
ENSJJAG00000013325	Pop1	100	72.754	ENSOPRG00000007667	POP1	100	72.655	Ochotona_princeps
ENSJJAG00000013325	Pop1	100	74.681	ENSODEG00000003984	POP1	100	75.172	Octodon_degus
ENSJJAG00000013325	Pop1	100	48.180	ENSONIG00000016445	pop1	100	47.893	Oreochromis_niloticus
ENSJJAG00000013325	Pop1	61	69.939	ENSOANG00000001278	-	94	69.939	Ornithorhynchus_anatinus
ENSJJAG00000013325	Pop1	100	73.469	ENSOCUG00000017400	POP1	100	73.469	Oryctolagus_cuniculus
ENSJJAG00000013325	Pop1	91	47.854	ENSORLG00000002839	pop1	95	47.961	Oryzias_latipes
ENSJJAG00000013325	Pop1	89	47.473	ENSORLG00020022450	POP1	96	48.124	Oryzias_latipes_hni
ENSJJAG00000013325	Pop1	100	45.598	ENSORLG00015012746	POP1	100	46.154	Oryzias_latipes_hsok
ENSJJAG00000013325	Pop1	100	46.351	ENSOMEG00000006915	pop1	99	46.726	Oryzias_melastigma
ENSJJAG00000013325	Pop1	100	74.732	ENSOGAG00000001466	POP1	100	75.220	Otolemur_garnettii
ENSJJAG00000013325	Pop1	100	78.418	ENSPPAG00000018410	POP1	100	78.418	Pan_paniscus
ENSJJAG00000013325	Pop1	100	76.275	ENSPPRG00000005002	POP1	100	76.275	Panthera_pardus
ENSJJAG00000013325	Pop1	100	76.569	ENSPTIG00000016527	POP1	100	76.569	Panthera_tigris_altaica
ENSJJAG00000013325	Pop1	100	79.602	ENSPTRG00000020458	POP1	100	79.602	Pan_troglodytes
ENSJJAG00000013325	Pop1	100	77.832	ENSPANG00000009704	POP1	100	77.832	Papio_anubis
ENSJJAG00000013325	Pop1	100	48.083	ENSPKIG00000016325	POP1	100	47.984	Paramormyrops_kingsleyae
ENSJJAG00000013325	Pop1	100	59.627	ENSPSIG00000012343	POP1	100	59.883	Pelodiscus_sinensis
ENSJJAG00000013325	Pop1	89	47.792	ENSPMGG00000022253	POP1	95	46.888	Periophthalmus_magnuspinnatus
ENSJJAG00000013325	Pop1	99	73.649	ENSPEMG00000023633	Pop1	100	73.649	Peromyscus_maniculatus_bairdii
ENSJJAG00000013325	Pop1	89	42.066	ENSPMAG00000003209	POP1	100	42.173	Petromyzon_marinus
ENSJJAG00000013325	Pop1	100	63.178	ENSPCIG00000012216	POP1	100	63.214	Phascolarctos_cinereus
ENSJJAG00000013325	Pop1	100	46.548	ENSPFOG00000012490	POP1	100	46.548	Poecilia_formosa
ENSJJAG00000013325	Pop1	100	46.450	ENSPLAG00000004646	POP1	100	46.351	Poecilia_latipinna
ENSJJAG00000013325	Pop1	100	46.700	ENSPMEG00000019592	POP1	100	46.700	Poecilia_mexicana
ENSJJAG00000013325	Pop1	100	46.298	ENSPREG00000020951	POP1	100	46.298	Poecilia_reticulata
ENSJJAG00000013325	Pop1	100	78.223	ENSPPYG00000018777	POP1	100	78.223	Pongo_abelii
ENSJJAG00000013325	Pop1	100	70.392	ENSPCAG00000016662	POP1	100	70.392	Procavia_capensis
ENSJJAG00000013325	Pop1	100	77.832	ENSPCOG00000019420	POP1	100	77.832	Propithecus_coquereli
ENSJJAG00000013325	Pop1	100	73.073	ENSPVAG00000014468	POP1	100	73.951	Pteropus_vampyrus
ENSJJAG00000013325	Pop1	88	48.613	ENSPNYG00000004476	pop1	97	47.979	Pundamilia_nyererei
ENSJJAG00000013325	Pop1	100	44.886	ENSPNAG00000000265	pop1	100	44.697	Pygocentrus_nattereri
ENSJJAG00000013325	Pop1	100	75.074	ENSRNOG00000005243	Pop1	100	75.074	Rattus_norvegicus
ENSJJAG00000013325	Pop1	100	78.905	ENSRBIG00000007996	POP1	100	78.905	Rhinopithecus_bieti
ENSJJAG00000013325	Pop1	100	79.005	ENSRROG00000012334	POP1	100	79.005	Rhinopithecus_roxellana
ENSJJAG00000013325	Pop1	99	77.745	ENSSBOG00000020830	POP1	100	77.745	Saimiri_boliviensis_boliviensis
ENSJJAG00000013325	Pop1	100	63.549	ENSSHAG00000000296	POP1	100	63.549	Sarcophilus_harrisii
ENSJJAG00000013325	Pop1	100	47.013	ENSSFOG00015007429	pop1	99	46.973	Scleropages_formosus
ENSJJAG00000013325	Pop1	93	45.503	ENSSMAG00000010467	POP1	98	46.667	Scophthalmus_maximus
ENSJJAG00000013325	Pop1	100	45.043	ENSSDUG00000007817	POP1	100	45.270	Seriola_dumerili
ENSJJAG00000013325	Pop1	100	45.077	ENSSLDG00000012565	POP1	100	45.402	Seriola_lalandi_dorsalis
ENSJJAG00000013325	Pop1	100	56.836	ENSSPUG00000003550	-	100	56.934	Sphenodon_punctatus
ENSJJAG00000013325	Pop1	89	48.732	ENSSPAG00000014955	pop1	94	48.625	Stegastes_partitus
ENSJJAG00000013325	Pop1	100	73.294	ENSSSCG00000006078	POP1	100	73.294	Sus_scrofa
ENSJJAG00000013325	Pop1	79	76.471	ENSTGUG00000012011	-	85	76.471	Taeniopygia_guttata
ENSJJAG00000013325	Pop1	91	47.123	ENSTRUG00000010856	pop1	94	46.950	Takifugu_rubripes
ENSJJAG00000013325	Pop1	93	46.862	ENSTNIG00000013297	pop1	99	47.077	Tetraodon_nigroviridis
ENSJJAG00000013325	Pop1	95	71.648	ENSTBEG00000014214	POP1	100	71.648	Tupaia_belangeri
ENSJJAG00000013325	Pop1	100	72.075	ENSTTRG00000016071	POP1	100	72.468	Tursiops_truncatus
ENSJJAG00000013325	Pop1	99	70.542	ENSUAMG00000017309	POP1	100	70.542	Ursus_americanus
ENSJJAG00000013325	Pop1	91	86.235	ENSUMAG00000016952	POP1	100	86.235	Ursus_maritimus
ENSJJAG00000013325	Pop1	83	84.982	ENSVPAG00000008278	POP1	82	84.982	Vicugna_pacos
ENSJJAG00000013325	Pop1	100	74.730	ENSVVUG00000010994	POP1	100	74.730	Vulpes_vulpes
ENSJJAG00000013325	Pop1	100	42.424	ENSXCOG00000017043	POP1	100	42.395	Xiphophorus_couchianus
ENSJJAG00000013325	Pop1	100	46.351	ENSXMAG00000002472	POP1	100	46.351	Xiphophorus_maculatus