EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000013376 (Gene tree)
Gene ID: 101606481
Gene Symbol: Pop4
Alias: 1110023P21Rik|Rpp29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 6811 bases
Position: chrJH725469.1:7446577-7453387
Accession: 101606481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000009550	UPF0086	PF01868.16	5.6e-27	1	1
ENSJJAP00000009552	UPF0086	PF01868.16	6.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000016001	-	693	XM_004659838	ENSJJAP00000009552	230 (aa)	XP_004659895	-
ENSJJAT00000015999	-	663	-	ENSJJAP00000009550	220 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000013376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000013376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000013376	Pop4	100	88.182	ENSG00000105171	POP4	100	93.750	Homo_sapiens
ENSJJAG00000013376	Pop4	97	76.744	ENSAMEG00000003172	-	100	74.775	Ailuropoda_melanoleuca
ENSJJAG00000013376	Pop4	99	87.156	ENSAMEG00000018329	-	99	87.215	Ailuropoda_melanoleuca
ENSJJAG00000013376	Pop4	93	61.275	ENSACIG00000008358	pop4	97	61.275	Amphilophus_citrinellus
ENSJJAG00000013376	Pop4	89	63.452	ENSAOCG00000010116	pop4	96	62.437	Amphiprion_ocellaris
ENSJJAG00000013376	Pop4	92	61.275	ENSAPEG00000002829	pop4	86	60.294	Amphiprion_percula
ENSJJAG00000013376	Pop4	92	61.765	ENSATEG00000013028	pop4	92	60.784	Anabas_testudineus
ENSJJAG00000013376	Pop4	90	73.000	ENSAPLG00000014051	POP4	97	73.000	Anas_platyrhynchos
ENSJJAG00000013376	Pop4	100	86.818	ENSANAG00000020295	POP4	100	86.818	Aotus_nancymaae
ENSJJAG00000013376	Pop4	92	62.500	ENSACLG00000000526	pop4	88	62.564	Astatotilapia_calliptera
ENSJJAG00000013376	Pop4	100	60.909	ENSAMXG00000002899	pop4	98	62.963	Astyanax_mexicanus
ENSJJAG00000013376	Pop4	100	90.455	ENSBTAG00000002223	POP4	100	90.455	Bos_taurus
ENSJJAG00000013376	Pop4	100	86.425	ENSCJAG00000046750	POP4	100	86.667	Callithrix_jacchus
ENSJJAG00000013376	Pop4	83	91.209	ENSCAFG00000007630	POP4	100	91.209	Canis_familiaris
ENSJJAG00000013376	Pop4	100	90.909	ENSCHIG00000016743	POP4	100	90.909	Capra_hircus
ENSJJAG00000013376	Pop4	100	89.545	ENSTSYG00000003488	POP4	100	89.545	Carlito_syrichta
ENSJJAG00000013376	Pop4	99	69.585	ENSCAPG00000011105	POP4	100	69.585	Cavia_aperea
ENSJJAG00000013376	Pop4	100	90.909	ENSCPOG00000002992	POP4	100	90.909	Cavia_porcellus
ENSJJAG00000013376	Pop4	100	87.727	ENSCCAG00000020285	-	100	87.727	Cebus_capucinus
ENSJJAG00000013376	Pop4	100	74.545	ENSCCAG00000034244	-	100	74.545	Cebus_capucinus
ENSJJAG00000013376	Pop4	100	89.091	ENSCATG00000036022	POP4	100	95.833	Cercocebus_atys
ENSJJAG00000013376	Pop4	100	91.818	ENSCLAG00000013162	POP4	100	91.818	Chinchilla_lanigera
ENSJJAG00000013376	Pop4	99	88.991	ENSCSAG00000004868	POP4	100	88.991	Chlorocebus_sabaeus
ENSJJAG00000013376	Pop4	99	67.742	ENSCHOG00000002071	POP4	100	67.742	Choloepus_hoffmanni
ENSJJAG00000013376	Pop4	100	71.818	ENSCPBG00000016132	POP4	100	71.818	Chrysemys_picta_bellii
ENSJJAG00000013376	Pop4	84	35.079	ENSCING00000023871	-	94	32.461	Ciona_intestinalis
ENSJJAG00000013376	Pop4	90	90.404	ENSCANG00000005924	POP4	98	90.404	Colobus_angolensis_palliatus
ENSJJAG00000013376	Pop4	100	87.273	ENSCGRG00001017185	Pop4	100	86.364	Cricetulus_griseus_chok1gshd
ENSJJAG00000013376	Pop4	100	87.273	ENSCGRG00000008155	Pop4	100	86.364	Cricetulus_griseus_crigri
ENSJJAG00000013376	Pop4	92	53.659	ENSCSEG00000002946	pop4	92	52.941	Cynoglossus_semilaevis
ENSJJAG00000013376	Pop4	92	45.588	ENSCVAG00000018602	POP4	87	44.608	Cyprinodon_variegatus
ENSJJAG00000013376	Pop4	88	66.495	ENSDARG00000101472	pop4	88	66.495	Danio_rerio
ENSJJAG00000013376	Pop4	100	88.636	ENSDNOG00000047663	POP4	90	87.054	Dasypus_novemcinctus
ENSJJAG00000013376	Pop4	78	83.721	ENSDORG00000008577	Pop4	100	83.721	Dipodomys_ordii
ENSJJAG00000013376	Pop4	86	34.000	FBgn0035831	CG8038	70	39.310	Drosophila_melanogaster
ENSJJAG00000013376	Pop4	99	73.733	ENSETEG00000003607	POP4	100	73.733	Echinops_telfairi
ENSJJAG00000013376	Pop4	100	42.918	ENSEBUG00000004305	pop4	98	42.358	Eptatretus_burgeri
ENSJJAG00000013376	Pop4	100	43.891	ENSEBUG00000008575	pop4	100	43.891	Eptatretus_burgeri
ENSJJAG00000013376	Pop4	89	49.282	ENSEBUG00000010447	pop4	81	47.847	Eptatretus_burgeri
ENSJJAG00000013376	Pop4	100	89.143	ENSECAG00000020206	POP4	82	86.538	Equus_caballus
ENSJJAG00000013376	Pop4	91	67.000	ENSEEUG00000013109	POP4	100	67.000	Erinaceus_europaeus
ENSJJAG00000013376	Pop4	100	58.636	ENSELUG00000019812	pop4	100	57.727	Esox_lucius
ENSJJAG00000013376	Pop4	100	88.636	ENSFCAG00000001619	POP4	100	88.636	Felis_catus
ENSJJAG00000013376	Pop4	98	67.130	ENSFALG00000000206	POP4	96	67.130	Ficedula_albicollis
ENSJJAG00000013376	Pop4	100	92.273	ENSFDAG00000017859	POP4	100	92.273	Fukomys_damarensis
ENSJJAG00000013376	Pop4	92	54.854	ENSFHEG00000012745	pop4	93	53.883	Fundulus_heteroclitus
ENSJJAG00000013376	Pop4	87	64.948	ENSGMOG00000000335	pop4	96	64.433	Gadus_morhua
ENSJJAG00000013376	Pop4	100	67.727	ENSGALG00000041972	POP4	94	66.816	Gallus_gallus
ENSJJAG00000013376	Pop4	78	51.149	ENSGAFG00000003571	pop4	96	51.149	Gambusia_affinis
ENSJJAG00000013376	Pop4	92	60.784	ENSGACG00000014510	pop4	93	66.279	Gasterosteus_aculeatus
ENSJJAG00000013376	Pop4	100	73.182	ENSGAGG00000024544	POP4	79	73.182	Gopherus_agassizii
ENSJJAG00000013376	Pop4	99	88.991	ENSGGOG00000038346	POP4	99	89.041	Gorilla_gorilla
ENSJJAG00000013376	Pop4	92	62.500	ENSHBUG00000021821	pop4	88	62.564	Haplochromis_burtoni
ENSJJAG00000013376	Pop4	99	91.284	ENSHGLG00000015798	POP4	99	91.324	Heterocephalus_glaber_female
ENSJJAG00000013376	Pop4	100	90.455	ENSHGLG00100009737	POP4	100	90.455	Heterocephalus_glaber_male
ENSJJAG00000013376	Pop4	89	62.121	ENSHCOG00000020937	pop4	88	62.564	Hippocampus_comes
ENSJJAG00000013376	Pop4	100	61.364	ENSIPUG00000013652	pop4	100	61.364	Ictalurus_punctatus
ENSJJAG00000013376	Pop4	100	90.909	ENSSTOG00000011016	POP4	100	90.909	Ictidomys_tridecemlineatus
ENSJJAG00000013376	Pop4	98	61.009	ENSKMAG00000012250	pop4	98	60.092	Kryptolebias_marmoratus
ENSJJAG00000013376	Pop4	99	55.204	ENSLBEG00000018846	-	99	55.455	Labrus_bergylta
ENSJJAG00000013376	Pop4	99	55.204	ENSLBEG00000014139	pop4	99	55.455	Labrus_bergylta
ENSJJAG00000013376	Pop4	99	63.134	ENSLACG00000008581	POP4	98	63.134	Latimeria_chalumnae
ENSJJAG00000013376	Pop4	100	67.273	ENSLOCG00000005597	pop4	100	67.273	Lepisosteus_oculatus
ENSJJAG00000013376	Pop4	100	88.182	ENSLAFG00000000084	POP4	100	88.182	Loxodonta_africana
ENSJJAG00000013376	Pop4	100	88.636	ENSMFAG00000029606	POP4	100	88.636	Macaca_fascicularis
ENSJJAG00000013376	Pop4	100	87.783	ENSMMUG00000017424	POP4	100	85.973	Macaca_mulatta
ENSJJAG00000013376	Pop4	100	87.783	ENSMNEG00000031374	POP4	100	85.973	Macaca_nemestrina
ENSJJAG00000013376	Pop4	100	88.182	ENSMLEG00000043454	POP4	100	88.182	Mandrillus_leucophaeus
ENSJJAG00000013376	Pop4	85	65.957	ENSMAMG00000011716	pop4	96	59.031	Mastacembelus_armatus
ENSJJAG00000013376	Pop4	92	62.500	ENSMZEG00005002360	pop4	88	62.564	Maylandia_zebra
ENSJJAG00000013376	Pop4	99	68.807	ENSMGAG00000005337	POP4	97	68.807	Meleagris_gallopavo
ENSJJAG00000013376	Pop4	100	87.727	ENSMAUG00000020110	Pop4	100	87.727	Mesocricetus_auratus
ENSJJAG00000013376	Pop4	99	86.239	ENSMICG00000035730	POP4	99	85.973	Microcebus_murinus
ENSJJAG00000013376	Pop4	92	62.376	ENSMMOG00000015321	pop4	91	62.376	Mola_mola
ENSJJAG00000013376	Pop4	98	77.778	ENSMODG00000029406	POP4	94	77.778	Monodelphis_domestica
ENSJJAG00000013376	Pop4	95	62.857	ENSMALG00000012571	pop4	94	63.285	Monopterus_albus
ENSJJAG00000013376	Pop4	100	85.973	MGP_CAROLIEiJ_G0029600	Pop4	100	86.878	Mus_caroli
ENSJJAG00000013376	Pop4	100	86.425	ENSMUSG00000030423	Pop4	100	85.973	Mus_musculus
ENSJJAG00000013376	Pop4	100	86.364	MGP_SPRETEiJ_G0030699	Pop4	100	85.909	Mus_spretus
ENSJJAG00000013376	Pop4	100	88.182	ENSMPUG00000008041	-	100	88.182	Mustela_putorius_furo
ENSJJAG00000013376	Pop4	100	74.208	ENSMPUG00000008063	-	100	74.208	Mustela_putorius_furo
ENSJJAG00000013376	Pop4	99	68.950	ENSMLUG00000010774	POP4	99	69.091	Myotis_lucifugus
ENSJJAG00000013376	Pop4	57	83.200	ENSMEUG00000003636	-	100	83.200	Notamacropus_eugenii
ENSJJAG00000013376	Pop4	91	90.000	ENSOPRG00000004736	POP4	100	90.000	Ochotona_princeps
ENSJJAG00000013376	Pop4	99	91.244	ENSODEG00000013025	POP4	100	91.509	Octodon_degus
ENSJJAG00000013376	Pop4	92	60.680	ENSONIG00000003458	pop4	92	60.680	Oreochromis_niloticus
ENSJJAG00000013376	Pop4	100	88.636	ENSOCUG00000015974	POP4	100	88.636	Oryctolagus_cuniculus
ENSJJAG00000013376	Pop4	90	61.084	ENSORLG00000020317	pop4	92	60.099	Oryzias_latipes
ENSJJAG00000013376	Pop4	92	59.804	ENSORLG00015011624	pop4	91	58.824	Oryzias_latipes_hsok
ENSJJAG00000013376	Pop4	89	62.944	ENSOMEG00000002538	pop4	88	61.929	Oryzias_melastigma
ENSJJAG00000013376	Pop4	99	89.450	ENSOGAG00000011168	POP4	99	89.450	Otolemur_garnettii
ENSJJAG00000013376	Pop4	100	90.498	ENSOARG00000004041	POP4	100	90.498	Ovis_aries
ENSJJAG00000013376	Pop4	100	88.636	ENSPPAG00000040372	POP4	100	88.636	Pan_paniscus
ENSJJAG00000013376	Pop4	100	88.636	ENSPPRG00000010502	POP4	100	88.636	Panthera_pardus
ENSJJAG00000013376	Pop4	100	88.636	ENSPTIG00000016598	POP4	100	88.636	Panthera_tigris_altaica
ENSJJAG00000013376	Pop4	100	88.636	ENSPTRG00000010779	POP4	100	88.636	Pan_troglodytes
ENSJJAG00000013376	Pop4	100	88.636	ENSPANG00000008546	POP4	100	88.636	Papio_anubis
ENSJJAG00000013376	Pop4	89	69.543	ENSPKIG00000004468	pop4	87	68.687	Paramormyrops_kingsleyae
ENSJJAG00000013376	Pop4	100	73.636	ENSPSIG00000015690	POP4	99	77.387	Pelodiscus_sinensis
ENSJJAG00000013376	Pop4	90	57.843	ENSPMGG00000008608	pop4	98	57.353	Periophthalmus_magnuspinnatus
ENSJJAG00000013376	Pop4	100	84.545	ENSPEMG00000014034	-	96	85.000	Peromyscus_maniculatus_bairdii
ENSJJAG00000013376	Pop4	99	71.560	ENSPEMG00000019982	-	100	71.560	Peromyscus_maniculatus_bairdii
ENSJJAG00000013376	Pop4	83	56.061	ENSPMAG00000006265	pop4	100	54.040	Petromyzon_marinus
ENSJJAG00000013376	Pop4	100	77.727	ENSPCIG00000024738	POP4	97	76.339	Phascolarctos_cinereus
ENSJJAG00000013376	Pop4	89	60.714	ENSPFOG00000000925	pop4	88	60.714	Poecilia_formosa
ENSJJAG00000013376	Pop4	89	60.714	ENSPLAG00000003161	pop4	88	60.714	Poecilia_latipinna
ENSJJAG00000013376	Pop4	89	60.714	ENSPMEG00000002475	pop4	88	60.714	Poecilia_mexicana
ENSJJAG00000013376	Pop4	92	59.606	ENSPREG00000022403	pop4	88	59.606	Poecilia_reticulata
ENSJJAG00000013376	Pop4	100	89.091	ENSPPYG00000009805	POP4	100	89.091	Pongo_abelii
ENSJJAG00000013376	Pop4	99	80.822	ENSPCAG00000007737	POP4	99	81.106	Procavia_capensis
ENSJJAG00000013376	Pop4	100	90.000	ENSPCOG00000018055	POP4	100	90.000	Propithecus_coquereli
ENSJJAG00000013376	Pop4	100	88.182	ENSPVAG00000006069	POP4	100	88.182	Pteropus_vampyrus
ENSJJAG00000013376	Pop4	92	62.981	ENSPNYG00000020038	pop4	88	63.077	Pundamilia_nyererei
ENSJJAG00000013376	Pop4	100	61.818	ENSPNAG00000005591	pop4	100	61.818	Pygocentrus_nattereri
ENSJJAG00000013376	Pop4	100	87.330	ENSRNOG00000027646	Pop4	100	88.235	Rattus_norvegicus
ENSJJAG00000013376	Pop4	80	85.143	ENSRBIG00000044769	POP4	89	87.681	Rhinopithecus_bieti
ENSJJAG00000013376	Pop4	100	88.182	ENSRROG00000028903	POP4	100	88.182	Rhinopithecus_roxellana
ENSJJAG00000013376	Pop4	57	34.532	YBR257W	-	50	34.532	Saccharomyces_cerevisiae
ENSJJAG00000013376	Pop4	100	88.182	ENSSBOG00000032445	POP4	100	88.182	Saimiri_boliviensis_boliviensis
ENSJJAG00000013376	Pop4	99	78.440	ENSSHAG00000016888	POP4	100	78.182	Sarcophilus_harrisii
ENSJJAG00000013376	Pop4	92	65.842	ENSSFOG00015014556	pop4	90	65.347	Scleropages_formosus
ENSJJAG00000013376	Pop4	93	61.137	ENSSMAG00000016611	pop4	99	60.190	Scophthalmus_maximus
ENSJJAG00000013376	Pop4	92	61.275	ENSSDUG00000019865	pop4	82	60.294	Seriola_dumerili
ENSJJAG00000013376	Pop4	96	60.280	ENSSLDG00000001763	pop4	92	59.346	Seriola_lalandi_dorsalis
ENSJJAG00000013376	Pop4	99	88.018	ENSSARG00000004748	POP4	100	88.018	Sorex_araneus
ENSJJAG00000013376	Pop4	92	63.725	ENSSPAG00000014364	pop4	91	62.745	Stegastes_partitus
ENSJJAG00000013376	Pop4	100	90.000	ENSSSCG00000002854	POP4	100	90.000	Sus_scrofa
ENSJJAG00000013376	Pop4	90	72.362	ENSTGUG00000008953	POP4	99	72.362	Taeniopygia_guttata
ENSJJAG00000013376	Pop4	92	61.576	ENSTNIG00000006401	pop4	100	61.576	Tetraodon_nigroviridis
ENSJJAG00000013376	Pop4	100	88.688	ENSTBEG00000002194	POP4	100	90.498	Tupaia_belangeri
ENSJJAG00000013376	Pop4	100	86.818	ENSTTRG00000005882	POP4	100	86.818	Tursiops_truncatus
ENSJJAG00000013376	Pop4	100	87.273	ENSUAMG00000003049	-	100	87.273	Ursus_americanus
ENSJJAG00000013376	Pop4	100	87.273	ENSUMAG00000007522	-	100	87.273	Ursus_maritimus
ENSJJAG00000013376	Pop4	92	89.109	ENSVVUG00000016876	-	71	89.109	Vulpes_vulpes
ENSJJAG00000013376	Pop4	98	68.056	ENSXETG00000017598	pop4	99	67.580	Xenopus_tropicalis
ENSJJAG00000013376	Pop4	92	59.223	ENSXCOG00000017695	pop4	88	58.049	Xiphophorus_couchianus
ENSJJAG00000013376	Pop4	92	59.223	ENSXMAG00000013862	pop4	88	58.049	Xiphophorus_maculatus