EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000013417 (Gene tree)
Gene ID: 101613382
Gene Symbol: -
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 37758 bases
Position: chrJH725437.1:508589-546346
Accession: 101613382
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000009609	SRP54	PF00448.22	2.9e-78	1	1
ENSJJAP00000009609	SRP54_N	PF02881.19	1.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000016058	-	1440	XM_004649596	ENSJJAP00000009609	479 (aa)	XP_004649653	-

Gene Model

Click here to download ENSJJAG00000013417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000013417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000013417	-	87	75.714	ENSJJAG00000016404	-	100	75.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000013417	-	100	94.841	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSJJAG00000013417	-	100	91.071	ENSAPOG00000011314	srp54	100	91.071	Acanthochromis_polyacanthus
ENSJJAG00000013417	-	100	94.841	ENSAMEG00000015544	SRP54	100	94.841	Ailuropoda_melanoleuca
ENSJJAG00000013417	-	89	89.755	ENSACIG00000022831	srp54	97	89.755	Amphilophus_citrinellus
ENSJJAG00000013417	-	100	91.071	ENSAOCG00000019401	srp54	100	91.071	Amphiprion_ocellaris
ENSJJAG00000013417	-	100	91.071	ENSAPEG00000001977	srp54	100	91.071	Amphiprion_percula
ENSJJAG00000013417	-	100	91.468	ENSATEG00000013877	srp54	100	91.468	Anabas_testudineus
ENSJJAG00000013417	-	94	93.249	ENSAPLG00000010125	SRP54	95	93.249	Anas_platyrhynchos
ENSJJAG00000013417	-	63	78.462	ENSACAG00000001124	-	100	78.462	Anolis_carolinensis
ENSJJAG00000013417	-	85	89.631	ENSACAG00000010631	-	100	89.631	Anolis_carolinensis
ENSJJAG00000013417	-	100	93.837	ENSACAG00000002103	-	100	93.837	Anolis_carolinensis
ENSJJAG00000013417	-	100	94.841	ENSANAG00000022133	SRP54	100	94.841	Aotus_nancymaae
ENSJJAG00000013417	-	100	91.270	ENSACLG00000015866	srp54	100	91.270	Astatotilapia_calliptera
ENSJJAG00000013417	-	100	91.270	ENSAMXG00000032669	SRP54	100	91.270	Astyanax_mexicanus
ENSJJAG00000013417	-	100	94.841	ENSBTAG00000019085	SRP54	100	94.841	Bos_taurus
ENSJJAG00000013417	-	98	66.667	WBGene00009012	F21D5.7	100	66.667	Caenorhabditis_elegans
ENSJJAG00000013417	-	100	94.841	ENSCJAG00000006581	SRP54	100	94.841	Callithrix_jacchus
ENSJJAG00000013417	-	100	94.841	ENSCAFG00000013331	SRP54	100	94.841	Canis_familiaris
ENSJJAG00000013417	-	100	94.841	ENSCAFG00020023427	SRP54	100	94.841	Canis_lupus_dingo
ENSJJAG00000013417	-	100	94.841	ENSCHIG00000026345	SRP54	100	94.841	Capra_hircus
ENSJJAG00000013417	-	100	94.643	ENSTSYG00000002680	-	100	94.643	Carlito_syrichta
ENSJJAG00000013417	-	94	83.158	ENSTSYG00000035333	-	93	83.158	Carlito_syrichta
ENSJJAG00000013417	-	94	61.378	ENSCAPG00000008780	SRP54	100	61.378	Cavia_aperea
ENSJJAG00000013417	-	100	94.444	ENSCPOG00000003691	SRP54	100	94.444	Cavia_porcellus
ENSJJAG00000013417	-	89	93.571	ENSCCAG00000024179	SRP54	100	93.795	Cebus_capucinus
ENSJJAG00000013417	-	100	94.841	ENSCATG00000034083	SRP54	100	94.841	Cercocebus_atys
ENSJJAG00000013417	-	100	94.841	ENSCLAG00000015076	SRP54	100	94.841	Chinchilla_lanigera
ENSJJAG00000013417	-	100	94.841	ENSCSAG00000015575	SRP54	100	94.841	Chlorocebus_sabaeus
ENSJJAG00000013417	-	95	84.244	ENSCHOG00000008986	SRP54	100	84.244	Choloepus_hoffmanni
ENSJJAG00000013417	-	100	94.048	ENSCPBG00000026195	SRP54	100	94.048	Chrysemys_picta_bellii
ENSJJAG00000013417	-	100	76.984	ENSCING00000007380	-	100	76.984	Ciona_intestinalis
ENSJJAG00000013417	-	100	94.841	ENSCANG00000028532	SRP54	100	94.841	Colobus_angolensis_palliatus
ENSJJAG00000013417	-	100	94.841	ENSCGRG00001009525	-	100	94.841	Cricetulus_griseus_chok1gshd
ENSJJAG00000013417	-	75	93.247	ENSCGRG00000009453	-	89	93.247	Cricetulus_griseus_crigri
ENSJJAG00000013417	-	100	90.278	ENSCSEG00000012392	srp54	100	90.278	Cynoglossus_semilaevis
ENSJJAG00000013417	-	100	91.071	ENSCVAG00000010395	srp54	100	91.071	Cyprinodon_variegatus
ENSJJAG00000013417	-	100	91.270	ENSDARG00000098367	srp54	100	91.270	Danio_rerio
ENSJJAG00000013417	-	100	94.841	ENSDNOG00000032525	SRP54	100	94.841	Dasypus_novemcinctus
ENSJJAG00000013417	-	88	82.569	ENSDORG00000005159	-	97	82.569	Dipodomys_ordii
ENSJJAG00000013417	-	96	73.608	FBgn0010747	Srp54k	98	73.293	Drosophila_melanogaster
ENSJJAG00000013417	-	100	94.048	ENSETEG00000016307	-	100	94.048	Echinops_telfairi
ENSJJAG00000013417	-	82	53.125	ENSETEG00000012102	-	99	53.125	Echinops_telfairi
ENSJJAG00000013417	-	100	83.135	ENSEBUG00000009437	-	100	83.135	Eptatretus_burgeri
ENSJJAG00000013417	-	100	94.841	ENSEASG00005002057	SRP54	100	94.841	Equus_asinus_asinus
ENSJJAG00000013417	-	99	94.578	ENSECAG00000018042	SRP54	98	94.578	Equus_caballus
ENSJJAG00000013417	-	100	78.175	ENSEEUG00000001511	SRP54	100	78.175	Erinaceus_europaeus
ENSJJAG00000013417	-	100	90.476	ENSELUG00000003395	srp54	100	90.476	Esox_lucius
ENSJJAG00000013417	-	100	95.040	ENSFCAG00000032033	SRP54	100	95.040	Felis_catus
ENSJJAG00000013417	-	100	93.651	ENSFALG00000005995	SRP54	100	93.651	Ficedula_albicollis
ENSJJAG00000013417	-	100	94.841	ENSFDAG00000016767	SRP54	100	94.841	Fukomys_damarensis
ENSJJAG00000013417	-	100	90.675	ENSFHEG00000004263	srp54	100	90.675	Fundulus_heteroclitus
ENSJJAG00000013417	-	95	85.146	ENSGMOG00000011391	srp54	100	85.146	Gadus_morhua
ENSJJAG00000013417	-	100	93.651	ENSGALG00000023135	SRP54	100	93.651	Gallus_gallus
ENSJJAG00000013417	-	100	91.270	ENSGAFG00000011586	srp54	100	91.270	Gambusia_affinis
ENSJJAG00000013417	-	100	90.675	ENSGACG00000004181	srp54	100	90.675	Gasterosteus_aculeatus
ENSJJAG00000013417	-	100	94.048	ENSGAGG00000014766	SRP54	100	94.048	Gopherus_agassizii
ENSJJAG00000013417	-	100	94.841	ENSGGOG00000002926	SRP54	100	94.841	Gorilla_gorilla
ENSJJAG00000013417	-	100	91.270	ENSHBUG00000005678	srp54	100	91.270	Haplochromis_burtoni
ENSJJAG00000013417	-	100	94.841	ENSHGLG00000002850	SRP54	100	94.841	Heterocephalus_glaber_female
ENSJJAG00000013417	-	100	66.667	ENSHGLG00100007281	-	100	66.667	Heterocephalus_glaber_male
ENSJJAG00000013417	-	100	94.841	ENSHGLG00100005263	SRP54	100	94.841	Heterocephalus_glaber_male
ENSJJAG00000013417	-	100	89.683	ENSHCOG00000021127	srp54	100	89.683	Hippocampus_comes
ENSJJAG00000013417	-	100	90.476	ENSIPUG00000001420	srp54	100	90.476	Ictalurus_punctatus
ENSJJAG00000013417	-	100	94.841	ENSSTOG00000016023	SRP54	100	94.841	Ictidomys_tridecemlineatus
ENSJJAG00000013417	-	100	90.675	ENSKMAG00000007707	srp54	100	90.675	Kryptolebias_marmoratus
ENSJJAG00000013417	-	100	91.071	ENSLBEG00000018690	srp54	100	91.071	Labrus_bergylta
ENSJJAG00000013417	-	100	91.071	ENSLBEG00000021122	srp54	100	91.071	Labrus_bergylta
ENSJJAG00000013417	-	100	90.873	ENSLACG00000017890	SRP54	100	90.873	Latimeria_chalumnae
ENSJJAG00000013417	-	100	91.865	ENSLOCG00000009440	srp54	100	91.865	Lepisosteus_oculatus
ENSJJAG00000013417	-	100	94.841	ENSLAFG00000012007	SRP54	100	94.841	Loxodonta_africana
ENSJJAG00000013417	-	100	94.841	ENSMFAG00000044371	SRP54	100	94.841	Macaca_fascicularis
ENSJJAG00000013417	-	100	94.841	ENSMMUG00000015073	FAM177A1	100	94.841	Macaca_mulatta
ENSJJAG00000013417	-	100	94.841	ENSMNEG00000006947	SRP54	100	94.841	Macaca_nemestrina
ENSJJAG00000013417	-	100	94.841	ENSMLEG00000042251	SRP54	100	94.841	Mandrillus_leucophaeus
ENSJJAG00000013417	-	100	91.270	ENSMAMG00000004803	srp54	100	91.270	Mastacembelus_armatus
ENSJJAG00000013417	-	100	91.270	ENSMZEG00005027528	srp54	100	91.270	Maylandia_zebra
ENSJJAG00000013417	-	100	88.933	ENSMGAG00000012481	SRP54	100	88.933	Meleagris_gallopavo
ENSJJAG00000013417	-	100	94.643	ENSMAUG00000014447	-	100	94.643	Mesocricetus_auratus
ENSJJAG00000013417	-	100	94.841	ENSMICG00000010270	SRP54	100	94.841	Microcebus_murinus
ENSJJAG00000013417	-	87	93.864	ENSMOCG00000000948	-	100	93.864	Microtus_ochrogaster
ENSJJAG00000013417	-	88	88.814	ENSMMOG00000020303	srp54	98	88.814	Mola_mola
ENSJJAG00000013417	-	100	94.643	ENSMODG00000023150	-	100	94.643	Monodelphis_domestica
ENSJJAG00000013417	-	100	94.643	ENSMODG00000012925	-	100	94.643	Monodelphis_domestica
ENSJJAG00000013417	-	88	89.286	ENSMALG00000009163	srp54	99	89.286	Monopterus_albus
ENSJJAG00000013417	-	100	94.643	MGP_CAROLIEiJ_G0017754	-	100	94.643	Mus_caroli
ENSJJAG00000013417	-	100	93.849	ENSMUSG00000079108	Srp54c	100	93.849	Mus_musculus
ENSJJAG00000013417	-	100	94.643	ENSMUSG00000112449	Srp54b	100	94.643	Mus_musculus
ENSJJAG00000013417	-	100	94.643	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSJJAG00000013417	-	100	94.643	MGP_PahariEiJ_G0029510	-	100	94.643	Mus_pahari
ENSJJAG00000013417	-	100	94.841	ENSMPUG00000016302	SRP54	100	94.841	Mustela_putorius_furo
ENSJJAG00000013417	-	100	94.246	ENSMLUG00000008958	SRP54	100	94.246	Myotis_lucifugus
ENSJJAG00000013417	-	100	84.921	ENSNGAG00000019806	-	100	84.921	Nannospalax_galili
ENSJJAG00000013417	-	87	90.227	ENSNBRG00000006000	srp54	100	90.227	Neolamprologus_brichardi
ENSJJAG00000013417	-	100	94.841	ENSNLEG00000003496	SRP54	100	94.841	Nomascus_leucogenys
ENSJJAG00000013417	-	65	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSJJAG00000013417	-	53	100.000	ENSOPRG00000014502	-	52	100.000	Ochotona_princeps
ENSJJAG00000013417	-	100	94.841	ENSODEG00000004865	SRP54	100	94.841	Octodon_degus
ENSJJAG00000013417	-	100	91.270	ENSONIG00000011768	srp54	100	91.270	Oreochromis_niloticus
ENSJJAG00000013417	-	100	94.841	ENSOANG00000014051	SRP54	100	94.841	Ornithorhynchus_anatinus
ENSJJAG00000013417	-	100	94.246	ENSOCUG00000007838	SRP54	100	94.246	Oryctolagus_cuniculus
ENSJJAG00000013417	-	100	91.071	ENSORLG00000010027	srp54	100	91.071	Oryzias_latipes
ENSJJAG00000013417	-	100	91.071	ENSORLG00020001878	srp54	100	91.071	Oryzias_latipes_hni
ENSJJAG00000013417	-	100	91.071	ENSORLG00015021866	srp54	100	91.071	Oryzias_latipes_hsok
ENSJJAG00000013417	-	100	91.270	ENSOMEG00000020952	srp54	100	91.270	Oryzias_melastigma
ENSJJAG00000013417	-	100	94.841	ENSOGAG00000012188	SRP54	100	94.841	Otolemur_garnettii
ENSJJAG00000013417	-	100	94.841	ENSOARG00000007160	SRP54	100	94.841	Ovis_aries
ENSJJAG00000013417	-	100	94.841	ENSPPAG00000017434	SRP54	100	94.841	Pan_paniscus
ENSJJAG00000013417	-	100	94.048	ENSPPRG00000014047	SRP54	100	94.048	Panthera_pardus
ENSJJAG00000013417	-	100	95.040	ENSPTIG00000000744	SRP54	96	95.040	Panthera_tigris_altaica
ENSJJAG00000013417	-	100	94.841	ENSPTRG00000006259	FAM177A1	100	94.841	Pan_troglodytes
ENSJJAG00000013417	-	100	94.841	ENSPANG00000023853	SRP54	100	94.841	Papio_anubis
ENSJJAG00000013417	-	100	90.675	ENSPKIG00000001953	srp54	100	90.675	Paramormyrops_kingsleyae
ENSJJAG00000013417	-	100	93.849	ENSPSIG00000006476	SRP54	100	93.849	Pelodiscus_sinensis
ENSJJAG00000013417	-	91	87.826	ENSPMGG00000004127	srp54	99	87.826	Periophthalmus_magnuspinnatus
ENSJJAG00000013417	-	100	89.353	ENSPEMG00000019634	-	100	89.353	Peromyscus_maniculatus_bairdii
ENSJJAG00000013417	-	100	84.127	ENSPMAG00000006078	-	100	84.127	Petromyzon_marinus
ENSJJAG00000013417	-	100	94.643	ENSPCIG00000016175	SRP54	100	94.643	Phascolarctos_cinereus
ENSJJAG00000013417	-	100	91.270	ENSPFOG00000008870	srp54	100	91.270	Poecilia_formosa
ENSJJAG00000013417	-	100	91.270	ENSPLAG00000009889	srp54	100	91.270	Poecilia_latipinna
ENSJJAG00000013417	-	100	91.270	ENSPMEG00000008601	srp54	100	91.270	Poecilia_mexicana
ENSJJAG00000013417	-	100	91.270	ENSPREG00000004505	srp54	100	91.270	Poecilia_reticulata
ENSJJAG00000013417	-	100	89.683	ENSPPYG00000005739	SRP54	100	89.683	Pongo_abelii
ENSJJAG00000013417	-	100	90.873	ENSPCAG00000006268	SRP54	100	90.873	Procavia_capensis
ENSJJAG00000013417	-	100	92.871	ENSPCOG00000022473	SRP54	100	92.871	Propithecus_coquereli
ENSJJAG00000013417	-	61	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSJJAG00000013417	-	100	91.270	ENSPNYG00000009717	srp54	100	91.270	Pundamilia_nyererei
ENSJJAG00000013417	-	100	91.071	ENSPNAG00000008544	srp54	100	91.071	Pygocentrus_nattereri
ENSJJAG00000013417	-	100	94.444	ENSRNOG00000032776	Srp54a	100	94.444	Rattus_norvegicus
ENSJJAG00000013417	-	100	94.841	ENSRROG00000041292	SRP54	100	94.841	Rhinopithecus_roxellana
ENSJJAG00000013417	-	85	49.887	YPR088C	SRP54	95	45.594	Saccharomyces_cerevisiae
ENSJJAG00000013417	-	94	94.515	ENSSBOG00000035145	SRP54	100	94.515	Saimiri_boliviensis_boliviensis
ENSJJAG00000013417	-	66	92.420	ENSSHAG00000000671	SRP54	100	92.420	Sarcophilus_harrisii
ENSJJAG00000013417	-	100	91.270	ENSSFOG00015013920	srp54	100	91.270	Scleropages_formosus
ENSJJAG00000013417	-	100	85.393	ENSSMAG00000002441	srp54	100	85.393	Scophthalmus_maximus
ENSJJAG00000013417	-	100	91.270	ENSSDUG00000018586	srp54	100	91.270	Seriola_dumerili
ENSJJAG00000013417	-	100	91.071	ENSSLDG00000010476	srp54	100	91.071	Seriola_lalandi_dorsalis
ENSJJAG00000013417	-	100	94.841	ENSSARG00000002744	SRP54	100	94.841	Sorex_araneus
ENSJJAG00000013417	-	100	94.048	ENSSPUG00000013101	SRP54	100	94.048	Sphenodon_punctatus
ENSJJAG00000013417	-	100	91.071	ENSSPAG00000002354	srp54	100	91.071	Stegastes_partitus
ENSJJAG00000013417	-	100	94.841	ENSSSCG00000001955	SRP54	100	94.841	Sus_scrofa
ENSJJAG00000013417	-	94	93.249	ENSTGUG00000011945	-	95	93.249	Taeniopygia_guttata
ENSJJAG00000013417	-	100	90.675	ENSTRUG00000007057	srp54	100	90.675	Takifugu_rubripes
ENSJJAG00000013417	-	100	90.278	ENSTNIG00000002589	srp54	100	90.278	Tetraodon_nigroviridis
ENSJJAG00000013417	-	88	85.523	ENSTBEG00000011409	SRP54	100	85.523	Tupaia_belangeri
ENSJJAG00000013417	-	100	84.921	ENSTTRG00000000928	SRP54	100	84.921	Tursiops_truncatus
ENSJJAG00000013417	-	55	99.618	ENSUAMG00000012385	SRP54	100	99.618	Ursus_americanus
ENSJJAG00000013417	-	100	94.841	ENSUMAG00000011234	SRP54	100	94.841	Ursus_maritimus
ENSJJAG00000013417	-	94	94.304	ENSVPAG00000005668	SRP54	100	94.304	Vicugna_pacos
ENSJJAG00000013417	-	100	94.841	ENSVVUG00000019962	SRP54	100	94.841	Vulpes_vulpes
ENSJJAG00000013417	-	100	77.120	ENSXETG00000012290	srp54	100	77.148	Xenopus_tropicalis
ENSJJAG00000013417	-	87	90.519	ENSXCOG00000004658	srp54	96	90.519	Xiphophorus_couchianus
ENSJJAG00000013417	-	100	91.270	ENSXMAG00000018315	srp54	100	91.270	Xiphophorus_maculatus