EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000014169 (Gene tree)
Gene ID: 101617070
Gene Symbol: Apaf1
Alias: 6230400I06Rik|Apaf1l
Full Name: apoptotic peptidase activating factor 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 122661 bases
Position: chrJH725438.1:49976930-50099590
Accession: 101617070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000010716	Utp8	PF10395.9	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000017179	-	4319	XM_004650202	ENSJJAP00000010716	1249 (aa)	XP_004650259	UPI000332F82C

Gene Model

Click here to download ENSJJAG00000014169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000014169's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000014169	Apaf1	51	30.220	ENSJJAG00000004124	Tbl3	76	30.220
ENSJJAG00000014169	Apaf1	52	31.373	ENSJJAG00000018739	Poc1a	84	31.373
ENSJJAG00000014169	Apaf1	51	32.759	ENSJJAG00000019990	Wdr61	95	32.759
ENSJJAG00000014169	Apaf1	50	32.298	ENSJJAG00000013503	Poc1b	72	32.298

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000014169	Apaf1	100	85.989	ENSCAFG00020023804	APAF1	100	85.989	Canis_lupus_dingo
ENSJJAG00000014169	Apaf1	100	87.270	ENSCGRG00001019923	Apaf1	100	87.270	Cricetulus_griseus_chok1gshd
ENSJJAG00000014169	Apaf1	100	88.951	ENSDNOG00000011420	APAF1	100	89.038	Dasypus_novemcinctus
ENSJJAG00000014169	Apaf1	100	69.513	ENSMGAG00000011573	APAF1	99	69.513	Meleagris_gallopavo
ENSJJAG00000014169	Apaf1	94	86.478	ENSPCAG00000005560	APAF1	94	86.478	Procavia_capensis
ENSJJAG00000014169	Apaf1	99	70.216	ENSTGUG00000008761	APAF1	99	70.216	Taeniopygia_guttata
ENSJJAG00000014169	Apaf1	100	84.080	ENSVVUG00000018651	APAF1	100	84.160	Vulpes_vulpes