EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000014239 (Gene tree)
Gene ID: 101614632
Gene Symbol: Ybx3
Alias: Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 25321 bases
Position: chrJH725554.1:6387904-6413224
Accession: 101614632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000010732	CSD	PF00313.22	1.1e-21	1	1
ENSJJAP00000010729	CSD	PF00313.22	1.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000017195	-	570	-	ENSJJAP00000010732	189 (aa)	-	-
ENSJJAT00000017192	-	795	XM_012951229	ENSJJAP00000010729	263 (aa)	XP_012806683	-

Gene Model

Click here to download ENSJJAG00000014239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000014239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000014239	Ybx3	90	41.797	ENSJJAG00000019501	-	70	42.857
ENSJJAG00000014239	Ybx3	95	43.750	ENSJJAG00000019196	-	80	43.154
ENSJJAG00000014239	Ybx3	75	53.191	ENSJJAG00000002819	-	79	46.256

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000014239	Ybx3	96	85.227	ENSG00000060138	YBX3	86	64.198	Homo_sapiens
ENSJJAG00000014239	Ybx3	93	85.542	ENSAMEG00000009393	YBX3	83	69.863	Ailuropoda_melanoleuca
ENSJJAG00000014239	Ybx3	90	84.615	ENSAPLG00000003147	YBX3	72	75.789	Anas_platyrhynchos
ENSJJAG00000014239	Ybx3	95	55.450	ENSANAG00000033366	-	78	61.033	Aotus_nancymaae
ENSJJAG00000014239	Ybx3	96	85.227	ENSANAG00000024492	-	93	69.360	Aotus_nancymaae
ENSJJAG00000014239	Ybx3	100	82.292	ENSBTAG00000009663	YBX3	78	64.865	Bos_taurus
ENSJJAG00000014239	Ybx3	96	85.227	ENSCJAG00000021660	-	80	69.360	Callithrix_jacchus
ENSJJAG00000014239	Ybx3	99	50.826	ENSCJAG00000033824	-	73	58.031	Callithrix_jacchus
ENSJJAG00000014239	Ybx3	92	82.716	ENSCAFG00000013401	YBX3	100	68.664	Canis_familiaris
ENSJJAG00000014239	Ybx3	95	74.419	ENSCAFG00020006412	YBX3	78	67.230	Canis_lupus_dingo
ENSJJAG00000014239	Ybx3	100	82.292	ENSCHIG00000010863	YBX3	82	68.919	Capra_hircus
ENSJJAG00000014239	Ybx3	92	83.750	ENSTSYG00000004204	-	88	68.166	Carlito_syrichta
ENSJJAG00000014239	Ybx3	95	64.486	ENSTSYG00000035821	-	75	64.486	Carlito_syrichta
ENSJJAG00000014239	Ybx3	92	82.500	ENSCAPG00000015039	YBX3	93	65.972	Cavia_aperea
ENSJJAG00000014239	Ybx3	95	86.207	ENSCPOG00000011329	YBX3	86	68.136	Cavia_porcellus
ENSJJAG00000014239	Ybx3	96	85.227	ENSCCAG00000016469	YBX3	79	68.687	Cebus_capucinus
ENSJJAG00000014239	Ybx3	96	85.227	ENSCATG00000034411	YBX3	79	68.350	Cercocebus_atys
ENSJJAG00000014239	Ybx3	92	82.500	ENSCLAG00000016030	YBX3	94	68.056	Chinchilla_lanigera
ENSJJAG00000014239	Ybx3	96	85.227	ENSCSAG00000008744	YBX3	79	68.013	Chlorocebus_sabaeus
ENSJJAG00000014239	Ybx3	93	85.542	ENSCPBG00000014147	YBX3	67	76.471	Chrysemys_picta_bellii
ENSJJAG00000014239	Ybx3	96	85.227	ENSCANG00000036801	YBX3	94	69.024	Colobus_angolensis_palliatus
ENSJJAG00000014239	Ybx3	100	84.375	ENSCGRG00001016148	Ybx3	81	70.748	Cricetulus_griseus_chok1gshd
ENSJJAG00000014239	Ybx3	92	80.000	ENSCGRG00000004563	Ybx3	98	69.072	Cricetulus_griseus_crigri
ENSJJAG00000014239	Ybx3	90	84.615	ENSDORG00000009103	Ybx3	81	67.361	Dipodomys_ordii
ENSJJAG00000014239	Ybx3	90	84.416	ENSETEG00000002557	YBX3	99	59.091	Echinops_telfairi
ENSJJAG00000014239	Ybx3	96	73.864	ENSEASG00005014726	YBX3	79	66.090	Equus_asinus_asinus
ENSJJAG00000014239	Ybx3	96	73.864	ENSECAG00000013777	YBX3	79	66.554	Equus_caballus
ENSJJAG00000014239	Ybx3	90	84.416	ENSEEUG00000010415	YBX3	100	66.084	Erinaceus_europaeus
ENSJJAG00000014239	Ybx3	96	85.227	ENSFCAG00000027748	YBX3	79	69.360	Felis_catus
ENSJJAG00000014239	Ybx3	90	84.615	ENSFALG00000003661	YBX3	78	75.789	Ficedula_albicollis
ENSJJAG00000014239	Ybx3	83	82.500	ENSFDAG00000021192	YBX3	92	64.583	Fukomys_damarensis
ENSJJAG00000014239	Ybx3	93	55.505	ENSGALG00000031890	YBX3	76	60.538	Gallus_gallus
ENSJJAG00000014239	Ybx3	93	85.542	ENSGAGG00000017780	YBX3	81	58.503	Gopherus_agassizii
ENSJJAG00000014239	Ybx3	96	85.227	ENSGGOG00000001352	YBX3	79	69.024	Gorilla_gorilla
ENSJJAG00000014239	Ybx3	79	58.130	ENSHGLG00000015495	-	76	63.861	Heterocephalus_glaber_female
ENSJJAG00000014239	Ybx3	91	74.783	ENSHGLG00000014798	-	87	59.596	Heterocephalus_glaber_female
ENSJJAG00000014239	Ybx3	83	61.194	ENSHGLG00100003589	YBX3	87	66.972	Heterocephalus_glaber_male
ENSJJAG00000014239	Ybx3	96	84.091	ENSSTOG00000032577	-	83	67.123	Ictidomys_tridecemlineatus
ENSJJAG00000014239	Ybx3	77	83.750	ENSSTOG00000002108	-	88	60.751	Ictidomys_tridecemlineatus
ENSJJAG00000014239	Ybx3	96	85.227	ENSLAFG00000017247	YBX3	87	63.514	Loxodonta_africana
ENSJJAG00000014239	Ybx3	96	85.227	ENSMFAG00000039369	YBX3	79	68.013	Macaca_fascicularis
ENSJJAG00000014239	Ybx3	96	85.227	ENSMMUG00000022469	YBX3	91	68.687	Macaca_mulatta
ENSJJAG00000014239	Ybx3	96	85.227	ENSMNEG00000045109	YBX3	79	67.677	Macaca_nemestrina
ENSJJAG00000014239	Ybx3	92	83.750	ENSMLEG00000033618	YBX3	81	67.708	Mandrillus_leucophaeus
ENSJJAG00000014239	Ybx3	91	83.750	ENSMGAG00000014224	YBX3	64	96.721	Meleagris_gallopavo
ENSJJAG00000014239	Ybx3	100	83.333	ENSMAUG00000012185	Ybx3	92	70.748	Mesocricetus_auratus
ENSJJAG00000014239	Ybx3	100	61.504	ENSMICG00000031459	-	78	62.927	Microcebus_murinus
ENSJJAG00000014239	Ybx3	95	86.047	ENSMICG00000038002	-	79	68.919	Microcebus_murinus
ENSJJAG00000014239	Ybx3	100	84.375	ENSMOCG00000016291	Ybx3	96	70.068	Microtus_ochrogaster
ENSJJAG00000014239	Ybx3	91	83.544	ENSMODG00000018248	YBX3	91	61.034	Monodelphis_domestica
ENSJJAG00000014239	Ybx3	100	85.417	MGP_CAROLIEiJ_G0028947	Ybx3	81	70.748	Mus_caroli
ENSJJAG00000014239	Ybx3	100	85.417	ENSMUSG00000030189	Ybx3	81	71.088	Mus_musculus
ENSJJAG00000014239	Ybx3	100	85.417	MGP_PahariEiJ_G0022709	Ybx3	81	70.748	Mus_pahari
ENSJJAG00000014239	Ybx3	100	85.417	MGP_SPRETEiJ_G0029994	Ybx3	81	71.088	Mus_spretus
ENSJJAG00000014239	Ybx3	95	75.676	ENSMPUG00000011810	YBX3	80	57.049	Mustela_putorius_furo
ENSJJAG00000014239	Ybx3	80	79.310	ENSMLUG00000007476	YBX3	100	65.683	Myotis_lucifugus
ENSJJAG00000014239	Ybx3	96	76.364	ENSNGAG00000000710	Ybx3	91	63.556	Nannospalax_galili
ENSJJAG00000014239	Ybx3	96	73.864	ENSNLEG00000034844	YBX3	84	66.897	Nomascus_leucogenys
ENSJJAG00000014239	Ybx3	52	49.425	ENSMEUG00000002507	-	81	48.276	Notamacropus_eugenii
ENSJJAG00000014239	Ybx3	71	92.405	ENSODEG00000017957	YBX3	87	68.493	Octodon_degus
ENSJJAG00000014239	Ybx3	96	65.909	ENSOCUG00000001889	YBX3	85	63.851	Oryctolagus_cuniculus
ENSJJAG00000014239	Ybx3	98	84.946	ENSOGAG00000013245	YBX3	80	68.977	Otolemur_garnettii
ENSJJAG00000014239	Ybx3	96	84.270	ENSOARG00000020919	YBX3	74	97.101	Ovis_aries
ENSJJAG00000014239	Ybx3	95	86.047	ENSPPAG00000039068	YBX3	82	69.024	Pan_paniscus
ENSJJAG00000014239	Ybx3	96	85.227	ENSPPRG00000005859	YBX3	79	69.360	Panthera_pardus
ENSJJAG00000014239	Ybx3	90	84.615	ENSPTIG00000005322	YBX3	81	68.056	Panthera_tigris_altaica
ENSJJAG00000014239	Ybx3	96	85.227	ENSPTRG00000004681	YBX3	79	69.024	Pan_troglodytes
ENSJJAG00000014239	Ybx3	96	85.227	ENSPANG00000010280	YBX3	79	68.350	Papio_anubis
ENSJJAG00000014239	Ybx3	90	55.140	ENSPSIG00000009247	YBX3	100	56.855	Pelodiscus_sinensis
ENSJJAG00000014239	Ybx3	100	70.130	ENSPEMG00000010391	-	85	64.202	Peromyscus_maniculatus_bairdii
ENSJJAG00000014239	Ybx3	100	84.375	ENSPEMG00000012132	-	92	70.408	Peromyscus_maniculatus_bairdii
ENSJJAG00000014239	Ybx3	77	75.000	ENSPCIG00000029949	YBX3	100	58.846	Phascolarctos_cinereus
ENSJJAG00000014239	Ybx3	96	85.227	ENSPPYG00000004279	YBX3	80	68.687	Pongo_abelii
ENSJJAG00000014239	Ybx3	54	84.091	ENSPCAG00000001397	YBX3	75	63.594	Procavia_capensis
ENSJJAG00000014239	Ybx3	56	55.135	ENSPCOG00000011663	YBX3	71	58.378	Propithecus_coquereli
ENSJJAG00000014239	Ybx3	61	84.783	ENSPVAG00000006740	YBX3	60	65.929	Pteropus_vampyrus
ENSJJAG00000014239	Ybx3	100	84.375	ENSRNOG00000005480	Ybx3	81	70.748	Rattus_norvegicus
ENSJJAG00000014239	Ybx3	95	86.047	ENSRBIG00000039208	YBX3	80	68.687	Rhinopithecus_bieti
ENSJJAG00000014239	Ybx3	96	85.227	ENSRROG00000029638	YBX3	80	68.687	Rhinopithecus_roxellana
ENSJJAG00000014239	Ybx3	92	83.750	ENSSBOG00000030573	YBX3	86	67.577	Saimiri_boliviensis_boliviensis
ENSJJAG00000014239	Ybx3	90	83.333	ENSSHAG00000003262	YBX3	98	61.168	Sarcophilus_harrisii
ENSJJAG00000014239	Ybx3	65	53.179	ENSSPUG00000009911	-	55	70.339	Sphenodon_punctatus
ENSJJAG00000014239	Ybx3	74	42.268	ENSSPAG00000016544	-	52	44.186	Stegastes_partitus
ENSJJAG00000014239	Ybx3	93	85.542	ENSSSCG00000000633	YBX3	77	70.370	Sus_scrofa
ENSJJAG00000014239	Ybx3	90	84.615	ENSTGUG00000012047	YBX3	100	48.951	Taeniopygia_guttata
ENSJJAG00000014239	Ybx3	95	79.310	ENSTBEG00000012570	YBX3	81	66.892	Tupaia_belangeri
ENSJJAG00000014239	Ybx3	79	78.571	ENSTTRG00000008045	YBX3	98	63.462	Tursiops_truncatus
ENSJJAG00000014239	Ybx3	87	70.423	ENSUAMG00000016662	YBX3	100	65.591	Ursus_americanus
ENSJJAG00000014239	Ybx3	90	84.615	ENSUMAG00000016118	YBX3	94	69.444	Ursus_maritimus
ENSJJAG00000014239	Ybx3	90	98.387	ENSVPAG00000000876	YBX3	100	62.671	Vicugna_pacos
ENSJJAG00000014239	Ybx3	87	67.606	ENSVVUG00000004956	YBX3	100	65.591	Vulpes_vulpes
ENSJJAG00000014239	Ybx3	92	81.481	ENSXETG00000016239	ybx3	90	50.893	Xenopus_tropicalis