EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000014269 (Gene tree)
Gene ID: 101605386
Gene Symbol: Ddx56
Alias: 2600001H07Rik|D11Ertd619e|NOH61
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 9373 bases
Position: chrJH725445.1:37426488-37435860
Accession: 101605386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000010783	ResIII	PF04851.15	3.6e-08	1	1
ENSJJAP00000010783	DEAD	PF00270.29	7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000017248	-	1629	XM_004652700	ENSJJAP00000010783	542 (aa)	XP_004652757	-

Gene Model

Click here to download ENSJJAG00000014269's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000014269's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000014269	Ddx56	67	31.053	ENSJJAG00000019645	Ddx3x	52	31.053
ENSJJAG00000014269	Ddx56	73	32.746	ENSJJAG00000009056	Ddx27	50	32.581
ENSJJAG00000014269	Ddx56	73	30.332	ENSJJAG00000012460	-	72	30.000
ENSJJAG00000014269	Ddx56	80	31.494	ENSJJAG00000000118	Ddx47	86	31.651
ENSJJAG00000014269	Ddx56	73	30.693	ENSJJAG00000021877	Ddx52	61	30.446

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000014269	Ddx56	100	91.160	ENSG00000136271	DDX56	100	93.600	Homo_sapiens
ENSJJAG00000014269	Ddx56	99	64.440	ENSAPOG00000017113	ddx56	98	64.972	Acanthochromis_polyacanthus
ENSJJAG00000014269	Ddx56	100	87.269	ENSAMEG00000017711	DDX56	99	87.269	Ailuropoda_melanoleuca
ENSJJAG00000014269	Ddx56	93	59.763	ENSACIG00000013747	ddx56	98	66.851	Amphilophus_citrinellus
ENSJJAG00000014269	Ddx56	98	63.822	ENSAOCG00000018059	ddx56	99	63.822	Amphiprion_ocellaris
ENSJJAG00000014269	Ddx56	88	66.735	ENSAOCG00000015447	-	87	66.940	Amphiprion_ocellaris
ENSJJAG00000014269	Ddx56	99	64.493	ENSAPEG00000007267	ddx56	98	64.493	Amphiprion_percula
ENSJJAG00000014269	Ddx56	99	64.674	ENSATEG00000005279	ddx56	98	65.455	Anabas_testudineus
ENSJJAG00000014269	Ddx56	99	63.834	ENSACLG00000020113	ddx56	98	64.791	Astatotilapia_calliptera
ENSJJAG00000014269	Ddx56	99	60.568	ENSAMXG00000019357	ddx56	99	60.893	Astyanax_mexicanus
ENSJJAG00000014269	Ddx56	100	90.037	ENSBTAG00000010602	DDX56	99	90.037	Bos_taurus
ENSJJAG00000014269	Ddx56	98	40.614	WBGene00016073	C24H12.4	85	40.614	Caenorhabditis_elegans
ENSJJAG00000014269	Ddx56	100	90.792	ENSCJAG00000012233	DDX56	99	90.792	Callithrix_jacchus
ENSJJAG00000014269	Ddx56	82	86.199	ENSCAFG00000029295	DDX56	99	86.199	Canis_familiaris
ENSJJAG00000014269	Ddx56	100	83.794	ENSCAFG00020019695	DDX56	99	83.794	Canis_lupus_dingo
ENSJJAG00000014269	Ddx56	100	89.852	ENSCHIG00000014261	DDX56	99	89.852	Capra_hircus
ENSJJAG00000014269	Ddx56	100	89.687	ENSTSYG00000008048	DDX56	99	90.239	Carlito_syrichta
ENSJJAG00000014269	Ddx56	86	88.699	ENSCAPG00000006286	DDX56	99	88.699	Cavia_aperea
ENSJJAG00000014269	Ddx56	100	88.766	ENSCPOG00000003359	DDX56	99	88.766	Cavia_porcellus
ENSJJAG00000014269	Ddx56	100	89.687	ENSCCAG00000025303	DDX56	99	90.424	Cebus_capucinus
ENSJJAG00000014269	Ddx56	100	91.328	ENSCATG00000039389	DDX56	99	91.328	Cercocebus_atys
ENSJJAG00000014269	Ddx56	100	90.037	ENSCLAG00000007666	DDX56	99	90.037	Chinchilla_lanigera
ENSJJAG00000014269	Ddx56	100	91.160	ENSCSAG00000015636	DDX56	99	91.160	Chlorocebus_sabaeus
ENSJJAG00000014269	Ddx56	98	68.015	ENSCPBG00000024556	DDX56	97	68.015	Chrysemys_picta_bellii
ENSJJAG00000014269	Ddx56	92	55.010	ENSCING00000005185	-	98	55.403	Ciona_intestinalis
ENSJJAG00000014269	Ddx56	92	54.653	ENSCSAVG00000011266	-	99	54.653	Ciona_savignyi
ENSJJAG00000014269	Ddx56	100	91.344	ENSCANG00000028187	DDX56	99	91.344	Colobus_angolensis_palliatus
ENSJJAG00000014269	Ddx56	100	89.483	ENSCGRG00001019019	Ddx56	99	89.483	Cricetulus_griseus_chok1gshd
ENSJJAG00000014269	Ddx56	100	89.483	ENSCGRG00000011870	Ddx56	99	89.483	Cricetulus_griseus_crigri
ENSJJAG00000014269	Ddx56	99	63.620	ENSCSEG00000008368	ddx56	99	63.978	Cynoglossus_semilaevis
ENSJJAG00000014269	Ddx56	99	64.610	ENSCVAG00000006499	ddx56	98	64.973	Cyprinodon_variegatus
ENSJJAG00000014269	Ddx56	99	63.636	ENSDARG00000020913	ddx56	98	64.545	Danio_rerio
ENSJJAG00000014269	Ddx56	86	85.867	ENSDNOG00000036526	DDX56	98	85.867	Dasypus_novemcinctus
ENSJJAG00000014269	Ddx56	99	46.474	FBgn0001565	Hlc	98	46.474	Drosophila_melanogaster
ENSJJAG00000014269	Ddx56	87	60.759	ENSETEG00000019559	-	99	59.916	Echinops_telfairi
ENSJJAG00000014269	Ddx56	83	78.325	ENSETEG00000002969	-	83	78.325	Echinops_telfairi
ENSJJAG00000014269	Ddx56	99	58.318	ENSEBUG00000009986	ddx56	99	58.739	Eptatretus_burgeri
ENSJJAG00000014269	Ddx56	100	89.852	ENSEASG00005017795	DDX56	99	89.852	Equus_asinus_asinus
ENSJJAG00000014269	Ddx56	100	89.668	ENSECAG00000019897	DDX56	99	89.668	Equus_caballus
ENSJJAG00000014269	Ddx56	86	88.675	ENSEEUG00000004849	DDX56	99	88.675	Erinaceus_europaeus
ENSJJAG00000014269	Ddx56	97	66.421	ENSELUG00000004150	ddx56	97	66.790	Esox_lucius
ENSJJAG00000014269	Ddx56	100	86.716	ENSFCAG00000010261	DDX56	99	87.269	Felis_catus
ENSJJAG00000014269	Ddx56	99	89.630	ENSFDAG00000007128	DDX56	99	89.630	Fukomys_damarensis
ENSJJAG00000014269	Ddx56	99	64.564	ENSFHEG00000018008	ddx56	95	68.283	Fundulus_heteroclitus
ENSJJAG00000014269	Ddx56	98	61.825	ENSGAFG00000006906	ddx56	97	62.011	Gambusia_affinis
ENSJJAG00000014269	Ddx56	98	69.403	ENSGAGG00000006789	DDX56	95	69.403	Gopherus_agassizii
ENSJJAG00000014269	Ddx56	100	91.160	ENSGGOG00000012031	DDX56	99	91.160	Gorilla_gorilla
ENSJJAG00000014269	Ddx56	93	62.353	ENSHBUG00000015246	ddx56	92	62.089	Haplochromis_burtoni
ENSJJAG00000014269	Ddx56	100	89.483	ENSHGLG00000017271	DDX56	99	89.483	Heterocephalus_glaber_female
ENSJJAG00000014269	Ddx56	100	89.483	ENSHGLG00100015731	DDX56	99	89.483	Heterocephalus_glaber_male
ENSJJAG00000014269	Ddx56	98	65.185	ENSHCOG00000001685	ddx56	97	65.185	Hippocampus_comes
ENSJJAG00000014269	Ddx56	99	62.387	ENSIPUG00000006602	ddx56	95	62.387	Ictalurus_punctatus
ENSJJAG00000014269	Ddx56	100	91.328	ENSSTOG00000000464	DDX56	99	91.328	Ictidomys_tridecemlineatus
ENSJJAG00000014269	Ddx56	99	64.557	ENSKMAG00000016611	ddx56	98	64.919	Kryptolebias_marmoratus
ENSJJAG00000014269	Ddx56	98	64.165	ENSLBEG00000026281	ddx56	98	64.353	Labrus_bergylta
ENSJJAG00000014269	Ddx56	98	66.483	ENSLACG00000015551	DDX56	96	67.219	Latimeria_chalumnae
ENSJJAG00000014269	Ddx56	99	63.538	ENSLOCG00000015185	ddx56	98	64.324	Lepisosteus_oculatus
ENSJJAG00000014269	Ddx56	99	88.868	ENSLAFG00000018206	DDX56	99	88.868	Loxodonta_africana
ENSJJAG00000014269	Ddx56	100	91.328	ENSMFAG00000041001	DDX56	99	91.328	Macaca_fascicularis
ENSJJAG00000014269	Ddx56	100	91.144	ENSMMUG00000002645	DDX56	99	91.144	Macaca_mulatta
ENSJJAG00000014269	Ddx56	100	91.328	ENSMNEG00000028492	DDX56	99	91.328	Macaca_nemestrina
ENSJJAG00000014269	Ddx56	100	91.513	ENSMLEG00000043591	DDX56	99	91.513	Mandrillus_leucophaeus
ENSJJAG00000014269	Ddx56	98	64.663	ENSMAMG00000007776	ddx56	97	65.631	Mastacembelus_armatus
ENSJJAG00000014269	Ddx56	99	63.834	ENSMZEG00005009813	ddx56	98	64.791	Maylandia_zebra
ENSJJAG00000014269	Ddx56	100	90.424	ENSMICG00000005550	DDX56	99	90.424	Microcebus_murinus
ENSJJAG00000014269	Ddx56	100	90.775	ENSMOCG00000016782	Ddx56	99	90.775	Microtus_ochrogaster
ENSJJAG00000014269	Ddx56	92	67.391	ENSMMOG00000009654	ddx56	95	67.984	Mola_mola
ENSJJAG00000014269	Ddx56	100	73.945	ENSMODG00000016137	DDX56	99	73.945	Monodelphis_domestica
ENSJJAG00000014269	Ddx56	68	64.343	ENSMALG00000016910	ddx56	99	64.343	Monopterus_albus
ENSJJAG00000014269	Ddx56	100	89.483	MGP_CAROLIEiJ_G0016069	Ddx56	99	89.483	Mus_caroli
ENSJJAG00000014269	Ddx56	100	90.590	ENSMUSG00000004393	Ddx56	99	90.590	Mus_musculus
ENSJJAG00000014269	Ddx56	100	90.406	MGP_PahariEiJ_G0016822	Ddx56	99	90.406	Mus_pahari
ENSJJAG00000014269	Ddx56	100	90.590	MGP_SPRETEiJ_G0016911	Ddx56	99	90.590	Mus_spretus
ENSJJAG00000014269	Ddx56	100	87.269	ENSMPUG00000018196	DDX56	87	87.269	Mustela_putorius_furo
ENSJJAG00000014269	Ddx56	99	88.725	ENSMLUG00000003509	DDX56	99	88.725	Myotis_lucifugus
ENSJJAG00000014269	Ddx56	100	91.697	ENSNGAG00000018785	Ddx56	99	91.697	Nannospalax_galili
ENSJJAG00000014269	Ddx56	93	64.215	ENSNBRG00000002656	ddx56	92	63.725	Neolamprologus_brichardi
ENSJJAG00000014269	Ddx56	100	91.344	ENSNLEG00000003816	DDX56	99	91.344	Nomascus_leucogenys
ENSJJAG00000014269	Ddx56	92	75.000	ENSMEUG00000006788	DDX56	100	75.000	Notamacropus_eugenii
ENSJJAG00000014269	Ddx56	100	88.398	ENSOPRG00000000292	-	99	88.398	Ochotona_princeps
ENSJJAG00000014269	Ddx56	69	92.800	ENSODEG00000014807	DDX56	100	92.800	Octodon_degus
ENSJJAG00000014269	Ddx56	99	65.672	ENSONIG00000011509	ddx56	98	65.672	Oreochromis_niloticus
ENSJJAG00000014269	Ddx56	50	81.041	ENSOANG00000010592	-	99	81.041	Ornithorhynchus_anatinus
ENSJJAG00000014269	Ddx56	75	69.877	ENSOANG00000015987	-	95	69.024	Ornithorhynchus_anatinus
ENSJJAG00000014269	Ddx56	96	67.857	ENSOANG00000006320	-	100	68.421	Ornithorhynchus_anatinus
ENSJJAG00000014269	Ddx56	99	87.823	ENSOCUG00000022918	DDX56	99	88.376	Oryctolagus_cuniculus
ENSJJAG00000014269	Ddx56	98	65.756	ENSORLG00000001434	ddx56	98	65.756	Oryzias_latipes
ENSJJAG00000014269	Ddx56	99	65.280	ENSORLG00020015718	ddx56	95	65.280	Oryzias_latipes_hni
ENSJJAG00000014269	Ddx56	98	65.756	ENSORLG00015003004	ddx56	94	65.756	Oryzias_latipes_hsok
ENSJJAG00000014269	Ddx56	99	65.336	ENSOMEG00000022072	ddx56	98	65.336	Oryzias_melastigma
ENSJJAG00000014269	Ddx56	100	89.503	ENSOGAG00000009981	DDX56	99	89.503	Otolemur_garnettii
ENSJJAG00000014269	Ddx56	100	90.037	ENSOARG00000015240	DDX56	99	90.175	Ovis_aries
ENSJJAG00000014269	Ddx56	100	73.394	ENSPPAG00000031263	-	99	73.211	Pan_paniscus
ENSJJAG00000014269	Ddx56	100	87.138	ENSPPAG00000029147	DDX56	99	87.138	Pan_paniscus
ENSJJAG00000014269	Ddx56	100	85.451	ENSPPRG00000014594	DDX56	99	86.765	Panthera_pardus
ENSJJAG00000014269	Ddx56	86	85.256	ENSPTIG00000019500	DDX56	91	85.256	Panthera_tigris_altaica
ENSJJAG00000014269	Ddx56	94	75.681	ENSPTRG00000052765	-	99	75.486	Pan_troglodytes
ENSJJAG00000014269	Ddx56	100	90.792	ENSPTRG00000019147	DDX56	99	90.792	Pan_troglodytes
ENSJJAG00000014269	Ddx56	100	91.144	ENSPANG00000002446	DDX56	99	91.144	Papio_anubis
ENSJJAG00000014269	Ddx56	99	64.973	ENSPKIG00000018998	ddx56	97	65.209	Paramormyrops_kingsleyae
ENSJJAG00000014269	Ddx56	94	66.216	ENSPMGG00000017421	ddx56	96	66.216	Periophthalmus_magnuspinnatus
ENSJJAG00000014269	Ddx56	100	82.202	ENSPCIG00000009336	DDX56	99	82.202	Phascolarctos_cinereus
ENSJJAG00000014269	Ddx56	98	63.919	ENSPFOG00000018658	ddx56	97	64.286	Poecilia_formosa
ENSJJAG00000014269	Ddx56	98	63.919	ENSPLAG00000019208	ddx56	97	64.286	Poecilia_latipinna
ENSJJAG00000014269	Ddx56	98	63.919	ENSPMEG00000001775	ddx56	97	64.286	Poecilia_mexicana
ENSJJAG00000014269	Ddx56	98	64.739	ENSPREG00000015142	ddx56	97	64.835	Poecilia_reticulata
ENSJJAG00000014269	Ddx56	100	91.713	ENSPPYG00000017591	DDX56	99	91.713	Pongo_abelii
ENSJJAG00000014269	Ddx56	96	87.189	ENSPCAG00000011499	DDX56	99	87.189	Procavia_capensis
ENSJJAG00000014269	Ddx56	100	90.976	ENSPCOG00000024864	DDX56	99	90.976	Propithecus_coquereli
ENSJJAG00000014269	Ddx56	88	90.233	ENSPVAG00000000791	DDX56	88	90.233	Pteropus_vampyrus
ENSJJAG00000014269	Ddx56	99	63.653	ENSPNYG00000019212	ddx56	98	64.610	Pundamilia_nyererei
ENSJJAG00000014269	Ddx56	99	63.755	ENSPNAG00000025446	ddx56	99	63.941	Pygocentrus_nattereri
ENSJJAG00000014269	Ddx56	100	90.775	ENSRNOG00000004670	Ddx56	99	90.775	Rattus_norvegicus
ENSJJAG00000014269	Ddx56	100	91.160	ENSRBIG00000030140	DDX56	99	91.160	Rhinopithecus_bieti
ENSJJAG00000014269	Ddx56	100	90.792	ENSRROG00000044428	DDX56	99	90.792	Rhinopithecus_roxellana
ENSJJAG00000014269	Ddx56	98	41.753	YLR276C	-	98	42.440	Saccharomyces_cerevisiae
ENSJJAG00000014269	Ddx56	100	90.608	ENSSBOG00000034339	DDX56	99	90.608	Saimiri_boliviensis_boliviensis
ENSJJAG00000014269	Ddx56	86	82.303	ENSSHAG00000016615	DDX56	99	82.303	Sarcophilus_harrisii
ENSJJAG00000014269	Ddx56	99	66.364	ENSSFOG00015012795	ddx56	97	66.606	Scleropages_formosus
ENSJJAG00000014269	Ddx56	99	63.685	ENSSMAG00000011280	ddx56	99	65.619	Scophthalmus_maximus
ENSJJAG00000014269	Ddx56	99	63.964	ENSSDUG00000023597	ddx56	98	64.324	Seriola_dumerili
ENSJJAG00000014269	Ddx56	99	63.964	ENSSLDG00000018369	ddx56	98	64.324	Seriola_lalandi_dorsalis
ENSJJAG00000014269	Ddx56	75	87.106	ENSSARG00000014363	DDX56	79	86.555	Sorex_araneus
ENSJJAG00000014269	Ddx56	99	67.468	ENSSPUG00000000784	DDX56	95	67.468	Sphenodon_punctatus
ENSJJAG00000014269	Ddx56	93	67.515	ENSSPAG00000009392	ddx56	99	66.234	Stegastes_partitus
ENSJJAG00000014269	Ddx56	99	90.556	ENSSSCG00000016745	DDX56	99	90.556	Sus_scrofa
ENSJJAG00000014269	Ddx56	99	65.177	ENSTRUG00000018623	ddx56	98	65.177	Takifugu_rubripes
ENSJJAG00000014269	Ddx56	98	62.254	ENSTNIG00000013593	ddx56	98	62.612	Tetraodon_nigroviridis
ENSJJAG00000014269	Ddx56	100	89.483	ENSTBEG00000007119	DDX56	99	89.483	Tupaia_belangeri
ENSJJAG00000014269	Ddx56	86	88.675	ENSTTRG00000010552	DDX56	99	88.675	Tursiops_truncatus
ENSJJAG00000014269	Ddx56	100	87.638	ENSUAMG00000014194	DDX56	99	87.638	Ursus_americanus
ENSJJAG00000014269	Ddx56	100	87.638	ENSUMAG00000009666	DDX56	99	87.638	Ursus_maritimus
ENSJJAG00000014269	Ddx56	100	86.347	ENSVVUG00000011905	DDX56	99	86.347	Vulpes_vulpes
ENSJJAG00000014269	Ddx56	99	65.280	ENSXETG00000019000	ddx56	99	65.280	Xenopus_tropicalis
ENSJJAG00000014269	Ddx56	98	64.218	ENSXCOG00000017413	ddx56	97	64.218	Xiphophorus_couchianus
ENSJJAG00000014269	Ddx56	98	64.179	ENSXMAG00000018749	ddx56	97	64.587	Xiphophorus_maculatus