EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSJJAG00000014708 (Gene tree)
Gene ID
101608027
Gene Symbol
Rbms3
Alias
6720477E09Rik|8430436O14Rik
Full Name
RNA binding motif single stranded interacting protein 3
Gene Type
protein_coding
Species
Jaculus_jaculus
Status
putative
Strand
Minus strand
Length
1175708 bases
Position
chrJH725484.1:8220172-9395879
Accession
101608027
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSJJAP00000011417RRM_1PF00076.227.6e-3212
ENSJJAP00000011417RRM_1PF00076.227.6e-3222
ENSJJAP00000011412RRM_1PF00076.228.5e-3212
ENSJJAP00000011412RRM_1PF00076.228.5e-3222
ENSJJAP00000011406RRM_1PF00076.221e-3112
ENSJJAP00000011406RRM_1PF00076.221e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSJJAT00000017884-1311XM_004662082ENSJJAP00000011412436 (aa)XP_004662139-
ENSJJAT00000017878-1404XM_004662088ENSJJAP00000011406467 (aa)XP_004662145-
ENSJJAT00000017848-558-ENSJJAP00000011377185 (aa)--
ENSJJAT00000017889-1263XM_004662083ENSJJAP00000011417420 (aa)XP_004662140UPI0003332302
Gene Model
Click here to download ENSJJAG00000014708's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000014708's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSJJAG00000014708Rbms39464.373ENSJJAG00000015940-9564.373
ENSJJAG00000014708Rbms38763.904ENSJJAG00000015563-9861.098
ENSJJAG00000014708Rbms39971.698ENSJJAG00000016543Rbms110071.698
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSJJAG00000014708Rbms310094.299ENSG00000144642RBMS310095.076Homo_sapiens
ENSJJAG00000014708Rbms38775.062ENSAPOG00000007266rbms39677.136Acanthochromis_polyacanthus
ENSJJAG00000014708Rbms39984.524ENSAPOG00000003432-9984.286Acanthochromis_polyacanthus
ENSJJAG00000014708Rbms36995.710ENSAMEG00000005947RBMS310095.710Ailuropoda_melanoleuca
ENSJJAG00000014708Rbms38771.545ENSACIG00000021113RBMS39671.816Amphilophus_citrinellus
ENSJJAG00000014708Rbms37289.803ENSACIG00000006987-9382.203Amphilophus_citrinellus
ENSJJAG00000014708Rbms39976.690ENSAOCG00000021274rbms310076.690Amphiprion_ocellaris
ENSJJAG00000014708Rbms39979.412ENSAOCG00000024104-9979.186Amphiprion_ocellaris
ENSJJAG00000014708Rbms38179.830ENSAPEG00000016299rbms38683.742Amphiprion_percula
ENSJJAG00000014708Rbms39978.846ENSAPEG00000009481-9978.606Amphiprion_percula
ENSJJAG00000014708Rbms39984.286ENSATEG00000008433-9984.048Anabas_testudineus
ENSJJAG00000014708Rbms39977.518ENSATEG00000024295rbms310077.752Anabas_testudineus
ENSJJAG00000014708Rbms39988.426ENSAPLG00000012270RBMS310087.731Anas_platyrhynchos
ENSJJAG00000014708Rbms39989.524ENSACAG00000028664RBMS39989.524Anolis_carolinensis
ENSJJAG00000014708Rbms310094.508ENSANAG00000021899RBMS310094.508Aotus_nancymaae
ENSJJAG00000014708Rbms39979.458ENSACLG00000008976-9479.233Astatotilapia_calliptera
ENSJJAG00000014708Rbms39976.761ENSACLG00000018506rbms310076.995Astatotilapia_calliptera
ENSJJAG00000014708Rbms36378.030ENSAMXG00000043770-10079.924Astyanax_mexicanus
ENSJJAG00000014708Rbms39981.324ENSAMXG00000020388rbms310082.506Astyanax_mexicanus
ENSJJAG00000014708Rbms39993.578ENSBTAG00000044062RBMS310095.037Bos_taurus
ENSJJAG00000014708Rbms310094.279ENSCJAG00000004312RBMS310094.279Callithrix_jacchus
ENSJJAG00000014708Rbms310094.508ENSCAFG00000005464RBMS310094.508Canis_familiaris
ENSJJAG00000014708Rbms39994.495ENSCAFG00020024980RBMS310094.495Canis_lupus_dingo
ENSJJAG00000014708Rbms310093.593ENSCHIG00000009144RBMS310093.593Capra_hircus
ENSJJAG00000014708Rbms37696.108ENSTSYG00000002615RBMS310096.108Carlito_syrichta
ENSJJAG00000014708Rbms39686.889ENSCAPG00000017783RBMS310087.073Cavia_aperea
ENSJJAG00000014708Rbms310094.062ENSCPOG00000006457RBMS310093.135Cavia_porcellus
ENSJJAG00000014708Rbms310094.279ENSCCAG00000008671RBMS310094.279Cebus_capucinus
ENSJJAG00000014708Rbms310094.279ENSCATG00000013222RBMS310094.279Cercocebus_atys
ENSJJAG00000014708Rbms310094.537ENSCLAG00000005866RBMS310094.537Chinchilla_lanigera
ENSJJAG00000014708Rbms36495.572ENSCSAG00000009655RBMS310095.572Chlorocebus_sabaeus
ENSJJAG00000014708Rbms310082.151ENSCHOG00000000758RBMS310082.151Choloepus_hoffmanni
ENSJJAG00000014708Rbms39990.952ENSCPBG00000022678RBMS39990.476Chrysemys_picta_bellii
ENSJJAG00000014708Rbms310094.508ENSCANG00000032137RBMS310094.508Colobus_angolensis_palliatus
ENSJJAG00000014708Rbms310091.055ENSCGRG00001007243Rbms310091.972Cricetulus_griseus_chok1gshd
ENSJJAG00000014708Rbms310091.055ENSCGRG00000004599Rbms310091.972Cricetulus_griseus_crigri
ENSJJAG00000014708Rbms39983.924ENSCSEG00000014677-9587.149Cynoglossus_semilaevis
ENSJJAG00000014708Rbms39976.869ENSCSEG00000010011RBMS310077.103Cynoglossus_semilaevis
ENSJJAG00000014708Rbms39981.473ENSCVAG00000022814-9687.738Cyprinodon_variegatus
ENSJJAG00000014708Rbms39977.123ENSCVAG00000022354rbms310077.594Cyprinodon_variegatus
ENSJJAG00000014708Rbms39982.423ENSDARG00000044574rbms38998.438Danio_rerio
ENSJJAG00000014708Rbms310093.822ENSDNOG00000016645RBMS310093.822Dasypus_novemcinctus
ENSJJAG00000014708Rbms310093.364ENSDORG00000007220Rbms310093.364Dipodomys_ordii
ENSJJAG00000014708Rbms39966.590ENSETEG00000009485-9966.590Echinops_telfairi
ENSJJAG00000014708Rbms36355.639ENSEBUG00000005830rbms38356.420Eptatretus_burgeri
ENSJJAG00000014708Rbms310094.299ENSEASG00005006152RBMS310094.299Equus_asinus_asinus
ENSJJAG00000014708Rbms310094.299ENSECAG00000017871RBMS310094.299Equus_caballus
ENSJJAG00000014708Rbms39086.768ENSEEUG00000014337RBMS310086.768Erinaceus_europaeus
ENSJJAG00000014708Rbms39187.306ENSELUG00000006905-9887.550Esox_lucius
ENSJJAG00000014708Rbms39977.230ENSELUG00000002862rbms310077.230Esox_lucius
ENSJJAG00000014708Rbms310094.062ENSFCAG00000002130RBMS310094.062Felis_catus
ENSJJAG00000014708Rbms39991.190ENSFALG00000009165RBMS39990.714Ficedula_albicollis
ENSJJAG00000014708Rbms310094.537ENSFDAG00000008278RBMS310094.537Fukomys_damarensis
ENSJJAG00000014708Rbms39966.746ENSFHEG00000004787RBMS39571.816Fundulus_heteroclitus
ENSJJAG00000014708Rbms38980.605ENSGMOG00000002600-9979.475Gadus_morhua
ENSJJAG00000014708Rbms39991.190ENSGALG00000011439RBMS39990.714Gallus_gallus
ENSJJAG00000014708Rbms39977.830ENSGAFG00000000168rbms310077.830Gambusia_affinis
ENSJJAG00000014708Rbms39984.561ENSGAFG00000003329-9984.323Gambusia_affinis
ENSJJAG00000014708Rbms36492.251ENSGAGG00000004039RBMS310092.251Gopherus_agassizii
ENSJJAG00000014708Rbms310094.279ENSGGOG00000007228RBMS310094.279Gorilla_gorilla
ENSJJAG00000014708Rbms36481.852ENSHBUG00000021196rbms39481.852Haplochromis_burtoni
ENSJJAG00000014708Rbms310082.353ENSHBUG00000019785-9682.127Haplochromis_burtoni
ENSJJAG00000014708Rbms310095.012ENSHGLG00000002170RBMS310095.012Heterocephalus_glaber_female
ENSJJAG00000014708Rbms310095.012ENSHGLG00100014278RBMS310095.012Heterocephalus_glaber_male
ENSJJAG00000014708Rbms39983.848ENSHCOG00000007894-9885.101Hippocampus_comes
ENSJJAG00000014708Rbms39981.797ENSIPUG00000017680rbms310082.979Ictalurus_punctatus
ENSJJAG00000014708Rbms310094.537ENSSTOG00000006324RBMS310094.537Ictidomys_tridecemlineatus
ENSJJAG00000014708Rbms39976.279ENSKMAG00000020500rbms310076.279Kryptolebias_marmoratus
ENSJJAG00000014708Rbms39984.286ENSKMAG00000012586-9984.048Kryptolebias_marmoratus
ENSJJAG00000014708Rbms35872.201ENSLBEG00000006677rbms39672.201Labrus_bergylta
ENSJJAG00000014708Rbms39984.487ENSLBEG00000027388-9984.248Labrus_bergylta
ENSJJAG00000014708Rbms39989.048ENSLACG00000010581RBMS310088.810Latimeria_chalumnae
ENSJJAG00000014708Rbms36987.372ENSLOCG00000002328rbms310087.372Lepisosteus_oculatus
ENSJJAG00000014708Rbms39994.266ENSLAFG00000000354RBMS310094.266Loxodonta_africana
ENSJJAG00000014708Rbms310094.537ENSMFAG00000033300RBMS310094.537Macaca_fascicularis
ENSJJAG00000014708Rbms310094.537ENSMMUG00000004404RBMS310094.537Macaca_mulatta
ENSJJAG00000014708Rbms310094.508ENSMNEG00000035839RBMS310096.030Macaca_nemestrina
ENSJJAG00000014708Rbms310094.279ENSMLEG00000029464RBMS310094.279Mandrillus_leucophaeus
ENSJJAG00000014708Rbms39978.037ENSMAMG00000024043rbms310078.271Mastacembelus_armatus
ENSJJAG00000014708Rbms39681.618ENSMAMG00000002176-8785.354Mastacembelus_armatus
ENSJJAG00000014708Rbms310082.380ENSMZEG00005026469-9682.273Maylandia_zebra
ENSJJAG00000014708Rbms39976.761ENSMZEG00005006308rbms310076.995Maylandia_zebra
ENSJJAG00000014708Rbms310091.055ENSMAUG00000016436Rbms310092.018Mesocricetus_auratus
ENSJJAG00000014708Rbms310094.050ENSMICG00000049249RBMS310094.050Microcebus_murinus
ENSJJAG00000014708Rbms310090.138ENSMOCG00000006997Rbms310091.743Microtus_ochrogaster
ENSJJAG00000014708Rbms39984.375ENSMMOG00000015071-9984.135Mola_mola
ENSJJAG00000014708Rbms38181.143ENSMMOG00000008471RBMS38884.663Mola_mola
ENSJJAG00000014708Rbms39982.774ENSMODG00000015125RBMS39982.550Monodelphis_domestica
ENSJJAG00000014708Rbms39984.286ENSMALG00000009155-9984.048Monopterus_albus
ENSJJAG00000014708Rbms38781.572ENSMALG00000019536RBMS310077.570Monopterus_albus
ENSJJAG00000014708Rbms39892.037MGP_CAROLIEiJ_G0032783Rbms310091.335Mus_caroli
ENSJJAG00000014708Rbms310090.367ENSMUSG00000039607Rbms310091.284Mus_musculus
ENSJJAG00000014708Rbms310090.160MGP_PahariEiJ_G0015650Rbms310091.076Mus_pahari
ENSJJAG00000014708Rbms310090.367MGP_SPRETEiJ_G0033930Rbms310091.284Mus_spretus
ENSJJAG00000014708Rbms39994.725ENSMPUG00000011956RBMS310094.725Mustela_putorius_furo
ENSJJAG00000014708Rbms39994.286ENSMLUG00000000659RBMS310094.286Myotis_lucifugus
ENSJJAG00000014708Rbms310092.694ENSNGAG00000014039Rbms310093.607Nannospalax_galili
ENSJJAG00000014708Rbms39984.524ENSNBRG00000018065-9984.286Neolamprologus_brichardi
ENSJJAG00000014708Rbms310094.279ENSNLEG00000004129RBMS310094.279Nomascus_leucogenys
ENSJJAG00000014708Rbms39981.193ENSMEUG00000004772RBMS310079.817Notamacropus_eugenii
ENSJJAG00000014708Rbms39994.253ENSOPRG00000006808RBMS38594.253Ochotona_princeps
ENSJJAG00000014708Rbms310094.537ENSODEG00000003651RBMS310094.537Octodon_degus
ENSJJAG00000014708Rbms39971.698ENSONIG00000007172rbms39877.228Oreochromis_niloticus
ENSJJAG00000014708Rbms39989.220ENSOANG00000010529RBMS39989.220Ornithorhynchus_anatinus
ENSJJAG00000014708Rbms310093.593ENSOCUG00000004840RBMS310093.593Oryctolagus_cuniculus
ENSJJAG00000014708Rbms39977.541ENSORLG00000005370RBMS310077.541Oryzias_latipes
ENSJJAG00000014708Rbms39984.762ENSORLG00000002306-9984.524Oryzias_latipes
ENSJJAG00000014708Rbms39977.069ENSORLG00020022674RBMS310077.069Oryzias_latipes_hni
ENSJJAG00000014708Rbms39984.524ENSORLG00020008496-9984.286Oryzias_latipes_hni
ENSJJAG00000014708Rbms39977.305ENSORLG00015005509rbms310077.305Oryzias_latipes_hsok
ENSJJAG00000014708Rbms39984.524ENSORLG00015015719-9984.286Oryzias_latipes_hsok
ENSJJAG00000014708Rbms39978.251ENSOMEG00000014805RBMS310079.434Oryzias_melastigma
ENSJJAG00000014708Rbms39186.010ENSOMEG00000007677-9587.945Oryzias_melastigma
ENSJJAG00000014708Rbms310093.593ENSOARG00000014684RBMS310093.593Ovis_aries
ENSJJAG00000014708Rbms310094.279ENSPPAG00000036519RBMS310094.279Pan_paniscus
ENSJJAG00000014708Rbms310094.050ENSPPRG00000002761RBMS310094.050Panthera_pardus
ENSJJAG00000014708Rbms310094.050ENSPTIG00000011568RBMS310094.050Panthera_tigris_altaica
ENSJJAG00000014708Rbms310094.299ENSPTRG00000014709RBMS310094.299Pan_troglodytes
ENSJJAG00000014708Rbms310094.279ENSPANG00000010234RBMS310091.455Papio_anubis
ENSJJAG00000014708Rbms36385.227ENSPKIG00000007989-10084.848Paramormyrops_kingsleyae
ENSJJAG00000014708Rbms35184.507ENSPKIG00000016025-7386.854Paramormyrops_kingsleyae
ENSJJAG00000014708Rbms39990.476ENSPSIG00000005269RBMS39990.000Pelodiscus_sinensis
ENSJJAG00000014708Rbms38180.172ENSPMGG00000021544rbms38583.129Periophthalmus_magnuspinnatus
ENSJJAG00000014708Rbms39186.528ENSPMGG00000021683-9688.251Periophthalmus_magnuspinnatus
ENSJJAG00000014708Rbms39987.558ENSPEMG00000001117Rbms310088.479Peromyscus_maniculatus_bairdii
ENSJJAG00000014708Rbms38689.751ENSPCIG00000006106RBMS39882.553Phascolarctos_cinereus
ENSJJAG00000014708Rbms39977.594ENSPFOG00000017887rbms310077.594Poecilia_formosa
ENSJJAG00000014708Rbms37679.439ENSPLAG00000016866-8379.751Poecilia_latipinna
ENSJJAG00000014708Rbms39984.798ENSPMEG00000002993-9984.561Poecilia_mexicana
ENSJJAG00000014708Rbms39976.247ENSPREG00000011880rbms39978.304Poecilia_reticulata
ENSJJAG00000014708Rbms38886.933ENSPREG00000018221-9883.908Poecilia_reticulata
ENSJJAG00000014708Rbms310080.778ENSPPYG00000014050RBMS38380.778Pongo_abelii
ENSJJAG00000014708Rbms310070.023ENSPCAG00000006307RBMS310070.023Procavia_capensis
ENSJJAG00000014708Rbms39994.023ENSPCOG00000017136RBMS310094.023Propithecus_coquereli
ENSJJAG00000014708Rbms310083.982ENSPVAG00000014037RBMS310083.982Pteropus_vampyrus
ENSJJAG00000014708Rbms39976.761ENSPNYG00000010546rbms310076.995Pundamilia_nyererei
ENSJJAG00000014708Rbms39984.762ENSPNYG00000012624-9984.524Pundamilia_nyererei
ENSJJAG00000014708Rbms39982.033ENSPNAG00000001800rbms310083.215Pygocentrus_nattereri
ENSJJAG00000014708Rbms39990.805ENSRNOG00000025881Rbms310091.724Rattus_norvegicus
ENSJJAG00000014708Rbms310094.508ENSRBIG00000035863RBMS310094.508Rhinopithecus_bieti
ENSJJAG00000014708Rbms38896.867ENSRROG00000027512RBMS310095.631Rhinopithecus_roxellana
ENSJJAG00000014708Rbms310094.279ENSSBOG00000020232RBMS310094.279Saimiri_boliviensis_boliviensis
ENSJJAG00000014708Rbms38787.945ENSSHAG00000002411RBMS39487.945Sarcophilus_harrisii
ENSJJAG00000014708Rbms39983.732ENSSFOG00015008578rbms39587.328Scleropages_formosus
ENSJJAG00000014708Rbms39974.126ENSSMAG00000004997rbms39980.217Scophthalmus_maximus
ENSJJAG00000014708Rbms39781.311ENSSMAG00000020065-9881.068Scophthalmus_maximus
ENSJJAG00000014708Rbms39977.336ENSSDUG00000013656RBMS310077.570Seriola_dumerili
ENSJJAG00000014708Rbms39984.524ENSSDUG00000019287-9984.286Seriola_dumerili
ENSJJAG00000014708Rbms39984.524ENSSLDG00000013224-9984.286Seriola_lalandi_dorsalis
ENSJJAG00000014708Rbms39977.030ENSSLDG00000020276RBMS310077.262Seriola_lalandi_dorsalis
ENSJJAG00000014708Rbms38482.337ENSSARG00000000695RBMS310082.337Sorex_araneus
ENSJJAG00000014708Rbms36890.411ENSSPUG00000017197RBMS39889.226Sphenodon_punctatus
ENSJJAG00000014708Rbms39978.360ENSSPAG00000003983-9978.132Stegastes_partitus
ENSJJAG00000014708Rbms39976.224ENSSPAG00000020693rbms310076.690Stegastes_partitus
ENSJJAG00000014708Rbms310093.824ENSSSCG00000036381RBMS310093.824Sus_scrofa
ENSJJAG00000014708Rbms37690.419ENSTGUG00000003572RBMS310090.419Taeniopygia_guttata
ENSJJAG00000014708Rbms39976.636ENSTRUG00000021719RBMS310076.869Takifugu_rubripes
ENSJJAG00000014708Rbms39975.118ENSTRUG00000007482-9975.000Takifugu_rubripes
ENSJJAG00000014708Rbms37892.625ENSTBEG00000005362RBMS310091.576Tupaia_belangeri
ENSJJAG00000014708Rbms39993.563ENSTTRG00000006202RBMS310093.563Tursiops_truncatus
ENSJJAG00000014708Rbms310094.508ENSUMAG00000000263RBMS310094.508Ursus_maritimus
ENSJJAG00000014708Rbms38884.595ENSVPAG00000003842RBMS310083.981Vicugna_pacos
ENSJJAG00000014708Rbms38796.597ENSVVUG00000004660RBMS39998.261Vulpes_vulpes
ENSJJAG00000014708Rbms37084.691ENSXETG00000032055RBMS39984.691Xenopus_tropicalis
ENSJJAG00000014708Rbms39172.010ENSXCOG00000019600-9572.654Xiphophorus_couchianus
ENSJJAG00000014708Rbms39984.561ENSXMAG00000014382-9984.323Xiphophorus_maculatus
ENSJJAG00000014708Rbms39976.000ENSXMAG00000021783rbms310077.647Xiphophorus_maculatus

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