EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000014894 (Gene tree)
Gene ID: 101600359
Gene Symbol: Cmss1
Alias: 1110001A06Rik|2610528E23Rik|4930572F24Rik
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 372835 bases
Position: chrJH725495.1:14542229-14915063
Accession: 101600359
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000011631	CMS1	PF14617.6	1e-33	1	1
ENSJJAP00000011633	CMS1	PF14617.6	1.2e-33	1	1
ENSJJAP00000011628	CMS1	PF14617.6	7.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000018109	-	690	-	ENSJJAP00000011633	229 (aa)	-	-
ENSJJAT00000018107	-	678	-	ENSJJAP00000011631	225 (aa)	-	-
ENSJJAT00000018104	-	840	XM_012949827	ENSJJAP00000011628	279 (aa)	XP_012805281	-

Gene Model

Click here to download ENSJJAG00000014894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000014894's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000014894	Cmss1	100	83.871	ENSG00000184220	CMSS1	99	91.358	Homo_sapiens
ENSJJAG00000014894	Cmss1	90	64.851	ENSAPOG00000010604	cmss1	100	56.917	Acanthochromis_polyacanthus
ENSJJAG00000014894	Cmss1	90	91.626	ENSAMEG00000004092	CMSS1	99	86.434	Ailuropoda_melanoleuca
ENSJJAG00000014894	Cmss1	90	54.455	ENSACIG00000021854	cmss1	79	52.830	Amphilophus_citrinellus
ENSJJAG00000014894	Cmss1	90	64.851	ENSAOCG00000013361	cmss1	100	53.716	Amphiprion_ocellaris
ENSJJAG00000014894	Cmss1	90	64.851	ENSAPEG00000005829	cmss1	100	54.138	Amphiprion_percula
ENSJJAG00000014894	Cmss1	96	60.889	ENSATEG00000008209	cmss1	100	53.425	Anabas_testudineus
ENSJJAG00000014894	Cmss1	90	69.802	ENSAPLG00000010542	CMSS1	100	69.130	Anas_platyrhynchos
ENSJJAG00000014894	Cmss1	90	69.307	ENSACAG00000011065	CMSS1	99	60.000	Anolis_carolinensis
ENSJJAG00000014894	Cmss1	100	82.500	ENSANAG00000023565	CMSS1	100	82.500	Aotus_nancymaae
ENSJJAG00000014894	Cmss1	90	62.376	ENSACLG00000027294	cmss1	100	51.203	Astatotilapia_calliptera
ENSJJAG00000014894	Cmss1	100	46.026	ENSAMXG00000002046	cmss1	100	48.148	Astyanax_mexicanus
ENSJJAG00000014894	Cmss1	100	83.871	ENSBTAG00000013663	CMSS1	100	83.871	Bos_taurus
ENSJJAG00000014894	Cmss1	100	82.857	ENSCJAG00000000610	CMSS1	100	82.857	Callithrix_jacchus
ENSJJAG00000014894	Cmss1	90	92.574	ENSCAFG00000009230	CMSS1	93	86.381	Canis_familiaris
ENSJJAG00000014894	Cmss1	90	86.139	ENSCAFG00020024156	-	77	77.551	Canis_lupus_dingo
ENSJJAG00000014894	Cmss1	90	92.574	ENSCAFG00020009464	-	95	86.486	Canis_lupus_dingo
ENSJJAG00000014894	Cmss1	90	89.604	ENSCHIG00000013003	CMSS1	93	83.721	Capra_hircus
ENSJJAG00000014894	Cmss1	90	89.604	ENSTSYG00000009266	CMSS1	100	81.679	Carlito_syrichta
ENSJJAG00000014894	Cmss1	83	75.000	ENSCAPG00000013584	CMSS1	87	75.000	Cavia_aperea
ENSJJAG00000014894	Cmss1	100	81.362	ENSCPOG00000014680	CMSS1	100	81.362	Cavia_porcellus
ENSJJAG00000014894	Cmss1	100	83.571	ENSCCAG00000034685	CMSS1	100	83.571	Cebus_capucinus
ENSJJAG00000014894	Cmss1	100	83.154	ENSCATG00000031980	CMSS1	100	83.154	Cercocebus_atys
ENSJJAG00000014894	Cmss1	89	91.500	ENSCLAG00000011241	CMSS1	98	89.520	Chinchilla_lanigera
ENSJJAG00000014894	Cmss1	90	90.594	ENSCSAG00000006024	CMSS1	99	86.420	Chlorocebus_sabaeus
ENSJJAG00000014894	Cmss1	100	62.724	ENSCHOG00000012098	CMSS1	100	62.724	Choloepus_hoffmanni
ENSJJAG00000014894	Cmss1	88	41.206	ENSCING00000014848	-	99	42.246	Ciona_intestinalis
ENSJJAG00000014894	Cmss1	56	40.476	ENSCSAVG00000002309	-	99	40.476	Ciona_savignyi
ENSJJAG00000014894	Cmss1	100	83.154	ENSCANG00000031337	CMSS1	100	83.154	Colobus_angolensis_palliatus
ENSJJAG00000014894	Cmss1	100	79.928	ENSCGRG00001014305	Cmss1	100	79.928	Cricetulus_griseus_chok1gshd
ENSJJAG00000014894	Cmss1	90	86.634	ENSCGRG00000006722	Cmss1	99	80.859	Cricetulus_griseus_crigri
ENSJJAG00000014894	Cmss1	90	62.871	ENSCSEG00000004958	cmss1	100	50.836	Cynoglossus_semilaevis
ENSJJAG00000014894	Cmss1	90	60.891	ENSCVAG00000005039	cmss1	100	51.042	Cyprinodon_variegatus
ENSJJAG00000014894	Cmss1	100	46.333	ENSDARG00000112579	cmss1	100	48.123	Danio_rerio
ENSJJAG00000014894	Cmss1	90	88.119	ENSDNOG00000040418	CMSS1	92	81.395	Dasypus_novemcinctus
ENSJJAG00000014894	Cmss1	100	81.720	ENSDORG00000010461	Cmss1	100	81.720	Dipodomys_ordii
ENSJJAG00000014894	Cmss1	58	51.538	ENSEBUG00000002156	-	95	51.538	Eptatretus_burgeri
ENSJJAG00000014894	Cmss1	89	89.500	ENSEASG00005010966	CMSS1	99	87.671	Equus_asinus_asinus
ENSJJAG00000014894	Cmss1	89	88.500	ENSECAG00000015662	CMSS1	99	86.726	Equus_caballus
ENSJJAG00000014894	Cmss1	100	54.839	ENSEEUG00000007624	-	100	54.839	Erinaceus_europaeus
ENSJJAG00000014894	Cmss1	90	62.376	ENSELUG00000019459	cmss1	100	52.318	Esox_lucius
ENSJJAG00000014894	Cmss1	100	87.097	ENSFCAG00000044577	CMSS1	100	87.097	Felis_catus
ENSJJAG00000014894	Cmss1	90	67.327	ENSFALG00000005816	CMSS1	100	65.401	Ficedula_albicollis
ENSJJAG00000014894	Cmss1	90	88.614	ENSFDAG00000012577	CMSS1	100	85.965	Fukomys_damarensis
ENSJJAG00000014894	Cmss1	96	60.619	ENSFHEG00000012008	cmss1	95	61.472	Fundulus_heteroclitus
ENSJJAG00000014894	Cmss1	90	61.881	ENSGMOG00000016729	cmss1	100	52.448	Gadus_morhua
ENSJJAG00000014894	Cmss1	90	69.307	ENSGALG00000015267	CMSS1	99	64.231	Gallus_gallus
ENSJJAG00000014894	Cmss1	91	63.235	ENSGAFG00000021217	cmss1	77	63.366	Gambusia_affinis
ENSJJAG00000014894	Cmss1	90	56.931	ENSGACG00000002798	cmss1	100	47.518	Gasterosteus_aculeatus
ENSJJAG00000014894	Cmss1	90	71.782	ENSGAGG00000019861	CMSS1	98	64.885	Gopherus_agassizii
ENSJJAG00000014894	Cmss1	90	91.584	ENSGGOG00000014125	CMSS1	98	84.047	Gorilla_gorilla
ENSJJAG00000014894	Cmss1	90	62.376	ENSHBUG00000008431	cmss1	100	51.877	Haplochromis_burtoni
ENSJJAG00000014894	Cmss1	89	89.500	ENSHGLG00000019481	CMSS1	100	82.213	Heterocephalus_glaber_female
ENSJJAG00000014894	Cmss1	89	89.500	ENSHGLG00100010314	CMSS1	100	81.712	Heterocephalus_glaber_male
ENSJJAG00000014894	Cmss1	90	64.851	ENSHCOG00000003222	cmss1	100	53.220	Hippocampus_comes
ENSJJAG00000014894	Cmss1	100	48.966	ENSIPUG00000011591	cmss1	100	48.973	Ictalurus_punctatus
ENSJJAG00000014894	Cmss1	100	85.305	ENSSTOG00000019366	CMSS1	100	85.305	Ictidomys_tridecemlineatus
ENSJJAG00000014894	Cmss1	90	54.455	ENSKMAG00000002390	cmss1	82	54.412	Kryptolebias_marmoratus
ENSJJAG00000014894	Cmss1	90	57.635	ENSLBEG00000006298	cmss1	83	57.635	Labrus_bergylta
ENSJJAG00000014894	Cmss1	96	65.899	ENSLACG00000009293	CMSS1	100	66.087	Latimeria_chalumnae
ENSJJAG00000014894	Cmss1	100	52.448	ENSLOCG00000009391	cmss1	100	52.448	Lepisosteus_oculatus
ENSJJAG00000014894	Cmss1	89	89.000	ENSLAFG00000017509	CMSS1	100	86.404	Loxodonta_africana
ENSJJAG00000014894	Cmss1	100	83.871	ENSMFAG00000045006	CMSS1	100	83.871	Macaca_fascicularis
ENSJJAG00000014894	Cmss1	100	83.513	ENSMMUG00000002939	CMSS1	98	87.273	Macaca_mulatta
ENSJJAG00000014894	Cmss1	100	83.871	ENSMNEG00000031315	CMSS1	100	83.871	Macaca_nemestrina
ENSJJAG00000014894	Cmss1	100	83.154	ENSMLEG00000033660	CMSS1	100	83.154	Mandrillus_leucophaeus
ENSJJAG00000014894	Cmss1	96	59.111	ENSMAMG00000017176	cmss1	100	52.560	Mastacembelus_armatus
ENSJJAG00000014894	Cmss1	90	62.376	ENSMZEG00005021886	cmss1	100	51.203	Maylandia_zebra
ENSJJAG00000014894	Cmss1	90	69.802	ENSMGAG00000014360	CMSS1	100	68.860	Meleagris_gallopavo
ENSJJAG00000014894	Cmss1	100	60.573	ENSMAUG00000020609	Cmss1	100	60.573	Mesocricetus_auratus
ENSJJAG00000014894	Cmss1	100	86.022	ENSMICG00000048977	CMSS1	100	86.022	Microcebus_murinus
ENSJJAG00000014894	Cmss1	100	77.500	ENSMOCG00000021937	Cmss1	100	77.500	Microtus_ochrogaster
ENSJJAG00000014894	Cmss1	90	60.891	ENSMMOG00000019794	cmss1	85	60.784	Mola_mola
ENSJJAG00000014894	Cmss1	90	79.703	ENSMODG00000002275	CMSS1	98	72.137	Monodelphis_domestica
ENSJJAG00000014894	Cmss1	93	61.502	ENSMALG00000004250	cmss1	100	51.203	Monopterus_albus
ENSJJAG00000014894	Cmss1	99	81.614	MGP_CAROLIEiJ_G0020824	Cmss1	100	79.286	Mus_caroli
ENSJJAG00000014894	Cmss1	100	80.357	ENSMUSG00000022748	Cmss1	100	80.357	Mus_musculus
ENSJJAG00000014894	Cmss1	100	78.929	MGP_PahariEiJ_G0016524	Cmss1	100	78.929	Mus_pahari
ENSJJAG00000014894	Cmss1	99	82.960	MGP_SPRETEiJ_G0021724	Cmss1	100	79.643	Mus_spretus
ENSJJAG00000014894	Cmss1	88	92.965	ENSMPUG00000011324	CMSS1	98	87.500	Mustela_putorius_furo
ENSJJAG00000014894	Cmss1	89	89.604	ENSMLUG00000001131	CMSS1	98	84.170	Myotis_lucifugus
ENSJJAG00000014894	Cmss1	100	84.229	ENSNGAG00000020316	Cmss1	100	84.229	Nannospalax_galili
ENSJJAG00000014894	Cmss1	90	61.881	ENSNBRG00000003095	cmss1	100	51.020	Neolamprologus_brichardi
ENSJJAG00000014894	Cmss1	100	84.588	ENSNLEG00000034172	CMSS1	100	84.588	Nomascus_leucogenys
ENSJJAG00000014894	Cmss1	94	63.721	ENSMEUG00000014505	CMSS1	100	65.789	Notamacropus_eugenii
ENSJJAG00000014894	Cmss1	100	85.305	ENSOPRG00000002986	CMSS1	100	85.305	Ochotona_princeps
ENSJJAG00000014894	Cmss1	100	73.477	ENSODEG00000001853	-	100	73.477	Octodon_degus
ENSJJAG00000014894	Cmss1	100	78.648	ENSODEG00000003558	-	100	78.648	Octodon_degus
ENSJJAG00000014894	Cmss1	100	67.742	ENSODEG00000009446	-	100	67.742	Octodon_degus
ENSJJAG00000014894	Cmss1	100	82.796	ENSODEG00000005226	-	100	82.796	Octodon_degus
ENSJJAG00000014894	Cmss1	90	62.376	ENSONIG00000006678	cmss1	78	62.255	Oreochromis_niloticus
ENSJJAG00000014894	Cmss1	91	76.961	ENSOANG00000007529	CMSS1	100	73.820	Ornithorhynchus_anatinus
ENSJJAG00000014894	Cmss1	90	90.099	ENSOCUG00000025366	CMSS1	93	84.436	Oryctolagus_cuniculus
ENSJJAG00000014894	Cmss1	100	54.386	ENSORLG00000020340	cmss1	100	52.740	Oryzias_latipes
ENSJJAG00000014894	Cmss1	91	56.863	ENSORLG00020012235	cmss1	86	56.863	Oryzias_latipes_hni
ENSJJAG00000014894	Cmss1	90	56.436	ENSORLG00015015551	cmss1	76	56.373	Oryzias_latipes_hsok
ENSJJAG00000014894	Cmss1	90	63.366	ENSOMEG00000012555	cmss1	100	53.425	Oryzias_melastigma
ENSJJAG00000014894	Cmss1	90	91.584	ENSOGAG00000002045	CMSS1	100	89.035	Otolemur_garnettii
ENSJJAG00000014894	Cmss1	90	89.163	ENSOARG00000017899	CMSS1	89	83.398	Ovis_aries
ENSJJAG00000014894	Cmss1	90	91.584	ENSPPAG00000038515	CMSS1	94	84.436	Pan_paniscus
ENSJJAG00000014894	Cmss1	100	86.738	ENSPPRG00000016767	CMSS1	100	86.738	Panthera_pardus
ENSJJAG00000014894	Cmss1	100	86.738	ENSPTIG00000018274	CMSS1	100	86.738	Panthera_tigris_altaica
ENSJJAG00000014894	Cmss1	100	83.513	ENSPTRG00000015157	CMSS1	99	86.420	Pan_troglodytes
ENSJJAG00000014894	Cmss1	90	90.594	ENSPANG00000019980	CMSS1	99	81.323	Papio_anubis
ENSJJAG00000014894	Cmss1	90	63.861	ENSPKIG00000012609	cmss1	99	55.970	Paramormyrops_kingsleyae
ENSJJAG00000014894	Cmss1	90	73.267	ENSPSIG00000003849	CMSS1	100	71.179	Pelodiscus_sinensis
ENSJJAG00000014894	Cmss1	90	61.576	ENSPMGG00000010286	cmss1	88	61.463	Periophthalmus_magnuspinnatus
ENSJJAG00000014894	Cmss1	100	81.429	ENSPEMG00000016384	Cmss1	100	81.429	Peromyscus_maniculatus_bairdii
ENSJJAG00000014894	Cmss1	91	53.431	ENSPMAG00000001146	cmss1	100	53.431	Petromyzon_marinus
ENSJJAG00000014894	Cmss1	93	76.056	ENSPCIG00000015656	CMSS1	98	71.923	Phascolarctos_cinereus
ENSJJAG00000014894	Cmss1	96	58.150	ENSPFOG00000016849	cmss1	100	53.819	Poecilia_formosa
ENSJJAG00000014894	Cmss1	96	57.709	ENSPLAG00000008323	cmss1	100	53.472	Poecilia_latipinna
ENSJJAG00000014894	Cmss1	96	58.150	ENSPMEG00000021020	cmss1	100	53.125	Poecilia_mexicana
ENSJJAG00000014894	Cmss1	97	59.361	ENSPREG00000007618	cmss1	74	59.361	Poecilia_reticulata
ENSJJAG00000014894	Cmss1	100	83.871	ENSPPYG00000013606	CMSS1	100	83.871	Pongo_abelii
ENSJJAG00000014894	Cmss1	100	86.738	ENSPCOG00000020035	CMSS1	100	86.738	Propithecus_coquereli
ENSJJAG00000014894	Cmss1	100	73.477	ENSPVAG00000017031	CMSS1	100	73.477	Pteropus_vampyrus
ENSJJAG00000014894	Cmss1	78	64.773	ENSPNYG00000013428	cmss1	97	51.698	Pundamilia_nyererei
ENSJJAG00000014894	Cmss1	100	48.185	ENSPNAG00000007912	cmss1	100	48.185	Pygocentrus_nattereri
ENSJJAG00000014894	Cmss1	90	88.119	ENSRNOG00000027888	Cmss1	100	78.927	Rattus_norvegicus
ENSJJAG00000014894	Cmss1	100	82.437	ENSRBIG00000037931	CMSS1	100	82.437	Rhinopithecus_bieti
ENSJJAG00000014894	Cmss1	100	82.437	ENSRROG00000042910	CMSS1	100	82.437	Rhinopithecus_roxellana
ENSJJAG00000014894	Cmss1	90	90.594	ENSSBOG00000030980	CMSS1	98	82.946	Saimiri_boliviensis_boliviensis
ENSJJAG00000014894	Cmss1	90	79.208	ENSSHAG00000009321	CMSS1	99	73.016	Sarcophilus_harrisii
ENSJJAG00000014894	Cmss1	90	64.356	ENSSFOG00015001509	cmss1	100	53.103	Scleropages_formosus
ENSJJAG00000014894	Cmss1	99	58.190	ENSSMAG00000001653	cmss1	100	51.667	Scophthalmus_maximus
ENSJJAG00000014894	Cmss1	90	63.366	ENSSDUG00000007719	cmss1	100	54.452	Seriola_dumerili
ENSJJAG00000014894	Cmss1	98	59.130	ENSSLDG00000012300	cmss1	95	51.931	Seriola_lalandi_dorsalis
ENSJJAG00000014894	Cmss1	100	70.000	ENSSARG00000003584	CMSS1	100	70.000	Sorex_araneus
ENSJJAG00000014894	Cmss1	90	71.287	ENSSPUG00000003865	CMSS1	100	69.469	Sphenodon_punctatus
ENSJJAG00000014894	Cmss1	91	63.725	ENSSPAG00000019182	cmss1	63	63.861	Stegastes_partitus
ENSJJAG00000014894	Cmss1	100	85.305	ENSSSCG00000011970	CMSS1	100	85.305	Sus_scrofa
ENSJJAG00000014894	Cmss1	90	66.832	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSJJAG00000014894	Cmss1	90	60.396	ENSTRUG00000015265	cmss1	100	50.530	Takifugu_rubripes
ENSJJAG00000014894	Cmss1	90	55.446	ENSTNIG00000002880	cmss1	95	47.426	Tetraodon_nigroviridis
ENSJJAG00000014894	Cmss1	100	57.857	ENSTBEG00000016722	CMSS1	100	57.857	Tupaia_belangeri
ENSJJAG00000014894	Cmss1	100	81.720	ENSTTRG00000001562	CMSS1	100	81.720	Tursiops_truncatus
ENSJJAG00000014894	Cmss1	90	93.069	ENSUAMG00000024209	CMSS1	100	91.031	Ursus_americanus
ENSJJAG00000014894	Cmss1	90	92.079	ENSUMAG00000001983	CMSS1	99	86.770	Ursus_maritimus
ENSJJAG00000014894	Cmss1	100	64.516	ENSVPAG00000000263	CMSS1	100	64.516	Vicugna_pacos
ENSJJAG00000014894	Cmss1	89	92.500	ENSVVUG00000021647	-	100	88.618	Vulpes_vulpes
ENSJJAG00000014894	Cmss1	90	91.584	ENSVVUG00000007776	-	89	87.611	Vulpes_vulpes
ENSJJAG00000014894	Cmss1	100	57.244	ENSXETG00000011858	cmss1	100	57.295	Xenopus_tropicalis
ENSJJAG00000014894	Cmss1	91	62.745	ENSXCOG00000018724	cmss1	70	62.745	Xiphophorus_couchianus
ENSJJAG00000014894	Cmss1	91	62.745	ENSXMAG00000011243	cmss1	76	62.871	Xiphophorus_maculatus