EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000014965 (Gene tree)
Gene ID: 101611384
Gene Symbol: Smarca5
Alias: 4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 44940 bases
Position: chrJH725453.1:16754400-16799339
Accession: 101611384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000011737	ResIII	PF04851.15	7e-11	1	1
ENSJJAP00000011737	DEAD	PF00270.29	3.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000018215	-	3147	XM_004655837	ENSJJAP00000011737	1048 (aa)	XP_004655894	-

Gene Model

Click here to download ENSJJAG00000014965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000014965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000014965	Smarca5	93	84.178	ENSJJAG00000002593	Smarca1	93	84.024

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000014965	Smarca5	100	97.433	ENSG00000153147	SMARCA5	100	97.433	Homo_sapiens
ENSJJAG00000014965	Smarca5	100	98.099	ENSAMEG00000009585	SMARCA5	100	98.099	Ailuropoda_melanoleuca
ENSJJAG00000014965	Smarca5	92	96.407	ENSAPLG00000009206	SMARCA5	100	96.407	Anas_platyrhynchos
ENSJJAG00000014965	Smarca5	99	93.462	ENSACAG00000003038	SMARCA5	99	93.462	Anolis_carolinensis
ENSJJAG00000014965	Smarca5	100	97.433	ENSANAG00000019345	SMARCA5	99	98.795	Aotus_nancymaae
ENSJJAG00000014965	Smarca5	100	97.719	ENSBTAG00000003399	SMARCA5	100	97.719	Bos_taurus
ENSJJAG00000014965	Smarca5	100	97.529	ENSCJAG00000002735	SMARCA5	100	97.529	Callithrix_jacchus
ENSJJAG00000014965	Smarca5	100	98.004	ENSCAFG00000007525	SMARCA5	100	98.004	Canis_familiaris
ENSJJAG00000014965	Smarca5	98	97.965	ENSCAFG00020025641	SMARCA5	99	97.965	Canis_lupus_dingo
ENSJJAG00000014965	Smarca5	100	98.004	ENSCHIG00000013730	-	100	98.004	Capra_hircus
ENSJJAG00000014965	Smarca5	100	96.293	ENSCHIG00000016375	-	100	96.293	Capra_hircus
ENSJJAG00000014965	Smarca5	96	98.213	ENSTSYG00000009954	SMARCA5	99	99.194	Carlito_syrichta
ENSJJAG00000014965	Smarca5	92	99.174	ENSCAPG00000013747	SMARCA5	95	99.174	Cavia_aperea
ENSJJAG00000014965	Smarca5	100	97.716	ENSCPOG00000002259	SMARCA5	100	97.716	Cavia_porcellus
ENSJJAG00000014965	Smarca5	100	97.529	ENSCCAG00000027215	SMARCA5	99	98.896	Cebus_capucinus
ENSJJAG00000014965	Smarca5	100	97.529	ENSCATG00000044917	SMARCA5	100	97.529	Cercocebus_atys
ENSJJAG00000014965	Smarca5	95	99.496	ENSCLAG00000006153	SMARCA5	100	99.496	Chinchilla_lanigera
ENSJJAG00000014965	Smarca5	92	99.174	ENSCSAG00000003448	SMARCA5	100	99.174	Chlorocebus_sabaeus
ENSJJAG00000014965	Smarca5	90	98.178	ENSCHOG00000011724	SMARCA5	88	98.178	Choloepus_hoffmanni
ENSJJAG00000014965	Smarca5	97	95.992	ENSCPBG00000027535	SMARCA5	96	97.800	Chrysemys_picta_bellii
ENSJJAG00000014965	Smarca5	100	97.338	ENSCANG00000041629	SMARCA5	100	97.338	Colobus_angolensis_palliatus
ENSJJAG00000014965	Smarca5	99	98.099	ENSCGRG00001012719	Smarca5	99	98.099	Cricetulus_griseus_chok1gshd
ENSJJAG00000014965	Smarca5	96	98.903	ENSCGRG00000001417	Smarca5	99	99.597	Cricetulus_griseus_crigri
ENSJJAG00000014965	Smarca5	98	95.150	ENSDNOG00000009158	SMARCA5	97	95.866	Dasypus_novemcinctus
ENSJJAG00000014965	Smarca5	90	90.612	ENSDORG00000003466	Smarca5	97	90.612	Dipodomys_ordii
ENSJJAG00000014965	Smarca5	92	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSJJAG00000014965	Smarca5	100	97.814	ENSEASG00005001866	SMARCA5	100	97.814	Equus_asinus_asinus
ENSJJAG00000014965	Smarca5	100	97.814	ENSECAG00000002676	SMARCA5	100	97.814	Equus_caballus
ENSJJAG00000014965	Smarca5	95	94.864	ENSEEUG00000013176	SMARCA5	100	94.864	Erinaceus_europaeus
ENSJJAG00000014965	Smarca5	92	89.485	ENSELUG00000014653	SMARCA5	99	89.485	Esox_lucius
ENSJJAG00000014965	Smarca5	100	98.194	ENSFCAG00000004544	SMARCA5	100	98.194	Felis_catus
ENSJJAG00000014965	Smarca5	92	97.010	ENSFALG00000004987	SMARCA5	100	97.010	Ficedula_albicollis
ENSJJAG00000014965	Smarca5	99	96.073	ENSFDAG00000021016	SMARCA5	100	99.496	Fukomys_damarensis
ENSJJAG00000014965	Smarca5	96	87.167	ENSGMOG00000007519	SMARCA5	97	87.749	Gadus_morhua
ENSJJAG00000014965	Smarca5	95	97.289	ENSGALG00000009913	SMARCA5	98	95.976	Gallus_gallus
ENSJJAG00000014965	Smarca5	93	90.890	ENSGACG00000017238	SMARCA5	95	90.890	Gasterosteus_aculeatus
ENSJJAG00000014965	Smarca5	97	96.946	ENSGAGG00000019882	SMARCA5	96	97.900	Gopherus_agassizii
ENSJJAG00000014965	Smarca5	100	97.433	ENSGGOG00000012595	SMARCA5	99	99.094	Gorilla_gorilla
ENSJJAG00000014965	Smarca5	96	89.453	ENSHGLG00000000317	-	96	89.432	Heterocephalus_glaber_female
ENSJJAG00000014965	Smarca5	100	97.336	ENSHGLG00000000816	-	99	97.336	Heterocephalus_glaber_female
ENSJJAG00000014965	Smarca5	95	99.396	ENSHGLG00100018421	-	100	99.396	Heterocephalus_glaber_male
ENSJJAG00000014965	Smarca5	100	98.291	ENSSTOG00000010683	SMARCA5	99	98.291	Ictidomys_tridecemlineatus
ENSJJAG00000014965	Smarca5	94	95.156	ENSLACG00000007091	SMARCA5	97	95.156	Latimeria_chalumnae
ENSJJAG00000014965	Smarca5	94	92.284	ENSLOCG00000008966	SMARCA5	96	92.284	Lepisosteus_oculatus
ENSJJAG00000014965	Smarca5	100	97.624	ENSLAFG00000007795	SMARCA5	100	97.624	Loxodonta_africana
ENSJJAG00000014965	Smarca5	100	97.529	ENSMFAG00000043649	SMARCA5	100	97.529	Macaca_fascicularis
ENSJJAG00000014965	Smarca5	100	97.529	ENSMMUG00000000829	SMARCA5	100	97.529	Macaca_mulatta
ENSJJAG00000014965	Smarca5	100	97.529	ENSMNEG00000031916	SMARCA5	100	97.529	Macaca_nemestrina
ENSJJAG00000014965	Smarca5	100	97.529	ENSMLEG00000042393	SMARCA5	100	97.529	Mandrillus_leucophaeus
ENSJJAG00000014965	Smarca5	95	96.900	ENSMGAG00000003517	SMARCA5	99	96.900	Meleagris_gallopavo
ENSJJAG00000014965	Smarca5	95	99.698	ENSMAUG00000015902	Smarca5	98	99.698	Mesocricetus_auratus
ENSJJAG00000014965	Smarca5	100	97.624	ENSMICG00000003971	SMARCA5	100	97.624	Microcebus_murinus
ENSJJAG00000014965	Smarca5	99	97.714	ENSMOCG00000016986	-	99	97.714	Microtus_ochrogaster
ENSJJAG00000014965	Smarca5	100	95.913	ENSMODG00000000391	SMARCA5	95	98.599	Monodelphis_domestica
ENSJJAG00000014965	Smarca5	100	97.716	ENSMUSG00000031715	Smarca5	100	97.716	Mus_musculus
ENSJJAG00000014965	Smarca5	100	97.907	MGP_PahariEiJ_G0022862	Smarca5	100	97.907	Mus_pahari
ENSJJAG00000014965	Smarca5	100	98.479	ENSMLUG00000000468	SMARCA5	100	98.479	Myotis_lucifugus
ENSJJAG00000014965	Smarca5	100	97.716	ENSNGAG00000000441	Smarca5	100	97.716	Nannospalax_galili
ENSJJAG00000014965	Smarca5	100	97.529	ENSNLEG00000005383	SMARCA5	100	97.529	Nomascus_leucogenys
ENSJJAG00000014965	Smarca5	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSJJAG00000014965	Smarca5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSJJAG00000014965	Smarca5	92	98.762	ENSOANG00000013921	SMARCA5	100	98.762	Ornithorhynchus_anatinus
ENSJJAG00000014965	Smarca5	92	99.587	ENSOCUG00000013042	SMARCA5	100	99.587	Oryctolagus_cuniculus
ENSJJAG00000014965	Smarca5	100	97.624	ENSOGAG00000009702	SMARCA5	100	97.624	Otolemur_garnettii
ENSJJAG00000014965	Smarca5	99	97.716	ENSOARG00000010589	SMARCA5	99	97.716	Ovis_aries
ENSJJAG00000014965	Smarca5	100	97.243	ENSPPAG00000028523	SMARCA5	99	98.993	Pan_paniscus
ENSJJAG00000014965	Smarca5	98	92.600	ENSPPRG00000004925	SMARCA5	96	93.996	Panthera_pardus
ENSJJAG00000014965	Smarca5	96	99.010	ENSPTIG00000020959	SMARCA5	97	99.010	Panthera_tigris_altaica
ENSJJAG00000014965	Smarca5	100	97.338	ENSPTRG00000016472	SMARCA5	99	99.094	Pan_troglodytes
ENSJJAG00000014965	Smarca5	100	97.529	ENSPANG00000001175	SMARCA5	100	97.529	Papio_anubis
ENSJJAG00000014965	Smarca5	98	87.366	ENSPKIG00000015885	SMARCA5	100	91.237	Paramormyrops_kingsleyae
ENSJJAG00000014965	Smarca5	93	90.881	ENSPKIG00000015699	SMARCA5	98	89.953	Paramormyrops_kingsleyae
ENSJJAG00000014965	Smarca5	95	95.687	ENSPSIG00000004177	SMARCA5	100	95.687	Pelodiscus_sinensis
ENSJJAG00000014965	Smarca5	92	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSJJAG00000014965	Smarca5	98	97.168	ENSPEMG00000008060	Smarca5	99	97.168	Peromyscus_maniculatus_bairdii
ENSJJAG00000014965	Smarca5	96	69.480	ENSPMAG00000006011	SMARCA5	82	84.144	Petromyzon_marinus
ENSJJAG00000014965	Smarca5	61	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSJJAG00000014965	Smarca5	100	95.632	ENSPCIG00000003926	SMARCA5	95	98.599	Phascolarctos_cinereus
ENSJJAG00000014965	Smarca5	100	97.624	ENSPPYG00000015091	SMARCA5	100	97.624	Pongo_abelii
ENSJJAG00000014965	Smarca5	86	89.339	ENSPCAG00000014230	SMARCA5	88	90.432	Procavia_capensis
ENSJJAG00000014965	Smarca5	100	94.867	ENSPCOG00000026744	SMARCA5	100	94.867	Propithecus_coquereli
ENSJJAG00000014965	Smarca5	99	97.810	ENSPVAG00000006482	SMARCA5	100	97.810	Pteropus_vampyrus
ENSJJAG00000014965	Smarca5	97	88.149	ENSPNAG00000027824	SMARCA5	97	90.249	Pygocentrus_nattereri
ENSJJAG00000014965	Smarca5	95	99.497	ENSRNOG00000018149	Smarca5	100	99.497	Rattus_norvegicus
ENSJJAG00000014965	Smarca5	100	97.341	ENSRBIG00000044644	SMARCA5	100	97.341	Rhinopithecus_bieti
ENSJJAG00000014965	Smarca5	98	97.193	ENSRROG00000029591	SMARCA5	99	99.095	Rhinopithecus_roxellana
ENSJJAG00000014965	Smarca5	100	97.909	ENSSBOG00000036257	SMARCA5	100	97.909	Saimiri_boliviensis_boliviensis
ENSJJAG00000014965	Smarca5	95	98.792	ENSSHAG00000008464	SMARCA5	100	98.792	Sarcophilus_harrisii
ENSJJAG00000014965	Smarca5	96	89.831	ENSSFOG00015013252	SMARCA5	97	89.831	Scleropages_formosus
ENSJJAG00000014965	Smarca5	99	92.426	ENSSPUG00000007604	SMARCA5	99	96.080	Sphenodon_punctatus
ENSJJAG00000014965	Smarca5	100	97.624	ENSSSCG00000009047	SMARCA5	100	97.624	Sus_scrofa
ENSJJAG00000014965	Smarca5	96	95.833	ENSTGUG00000002408	SMARCA5	99	95.916	Taeniopygia_guttata
ENSJJAG00000014965	Smarca5	98	97.674	ENSUAMG00000023495	SMARCA5	99	97.674	Ursus_americanus
ENSJJAG00000014965	Smarca5	96	99.003	ENSUMAG00000015324	SMARCA5	97	99.003	Ursus_maritimus
ENSJJAG00000014965	Smarca5	100	97.719	ENSVPAG00000008982	SMARCA5	100	97.719	Vicugna_pacos
ENSJJAG00000014965	Smarca5	100	98.004	ENSVVUG00000017473	SMARCA5	100	98.004	Vulpes_vulpes
ENSJJAG00000014965	Smarca5	90	92.819	ENSXETG00000017566	smarca5	95	92.819	Xenopus_tropicalis