EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000015053 (Gene tree)
Gene ID: 101608637
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 7532 bases
Position: chrJH725546.1:5950355-5957886
Accession: 101608637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000011828	RNA_pol_Rpb4	PF03874.16	4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000018306	-	429	XM_004668176	ENSJJAP00000011828	142 (aa)	XP_004668233	UPI00033302E1

Gene Model

Click here to download ENSJJAG00000015053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000015053's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000015053	-	82	94.017	ENSJJAG00000005723	-	94	94.017
ENSJJAG00000015053	-	100	90.845	ENSJJAG00000000783	-	100	90.845

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000015053	-	100	98.592	ENSG00000144231	POLR2D	100	100.000	Homo_sapiens
ENSJJAG00000015053	-	99	90.071	ENSAPOG00000023553	polr2d	98	90.071	Acanthochromis_polyacanthus
ENSJJAG00000015053	-	100	97.222	ENSAMEG00000011746	POLR2D	100	97.222	Ailuropoda_melanoleuca
ENSJJAG00000015053	-	99	90.071	ENSAOCG00000007295	polr2d	98	90.071	Amphiprion_ocellaris
ENSJJAG00000015053	-	99	90.071	ENSAPEG00000018714	polr2d	98	90.071	Amphiprion_percula
ENSJJAG00000015053	-	100	90.972	ENSATEG00000020416	polr2d	100	90.972	Anabas_testudineus
ENSJJAG00000015053	-	100	95.775	ENSACAG00000005255	POLR2D	100	95.775	Anolis_carolinensis
ENSJJAG00000015053	-	100	98.592	ENSANAG00000019959	POLR2D	100	98.592	Aotus_nancymaae
ENSJJAG00000015053	-	100	90.278	ENSACLG00000009919	polr2d	100	70.139	Astatotilapia_calliptera
ENSJJAG00000015053	-	94	94.737	ENSAMXG00000008954	polr2d	100	90.210	Astyanax_mexicanus
ENSJJAG00000015053	-	100	98.592	ENSBTAG00000053244	POLR2D	100	98.592	Bos_taurus
ENSJJAG00000015053	-	99	57.639	WBGene00018391	rpb-4	100	57.639	Caenorhabditis_elegans
ENSJJAG00000015053	-	100	98.592	ENSCJAG00000042216	-	100	98.592	Callithrix_jacchus
ENSJJAG00000015053	-	100	97.887	ENSCJAG00000021814	-	100	97.887	Callithrix_jacchus
ENSJJAG00000015053	-	100	98.592	ENSCAFG00000004311	POLR2D	100	98.592	Canis_familiaris
ENSJJAG00000015053	-	100	98.592	ENSCAFG00020003617	POLR2D	100	98.592	Canis_lupus_dingo
ENSJJAG00000015053	-	100	98.592	ENSCHIG00000025995	POLR2D	100	98.592	Capra_hircus
ENSJJAG00000015053	-	82	99.145	ENSTSYG00000036021	POLR2D	100	99.145	Carlito_syrichta
ENSJJAG00000015053	-	100	97.887	ENSCPOG00000002571	POLR2D	100	97.887	Cavia_porcellus
ENSJJAG00000015053	-	100	98.592	ENSCCAG00000037709	POLR2D	100	98.592	Cebus_capucinus
ENSJJAG00000015053	-	100	98.592	ENSCATG00000036749	POLR2D	100	98.592	Cercocebus_atys
ENSJJAG00000015053	-	100	97.887	ENSCLAG00000004449	POLR2D	100	97.887	Chinchilla_lanigera
ENSJJAG00000015053	-	100	98.592	ENSCSAG00000016861	POLR2D	100	98.592	Chlorocebus_sabaeus
ENSJJAG00000015053	-	82	100.000	ENSCHOG00000013850	POLR2D	100	100.000	Choloepus_hoffmanni
ENSJJAG00000015053	-	100	95.070	ENSCPBG00000019132	POLR2D	51	95.070	Chrysemys_picta_bellii
ENSJJAG00000015053	-	90	86.719	ENSCING00000011474	-	96	86.719	Ciona_intestinalis
ENSJJAG00000015053	-	90	86.719	ENSCSAVG00000008353	-	88	86.719	Ciona_savignyi
ENSJJAG00000015053	-	100	98.592	ENSCANG00000043665	POLR2D	100	98.592	Colobus_angolensis_palliatus
ENSJJAG00000015053	-	100	98.592	ENSCGRG00001013608	Polr2d	100	98.592	Cricetulus_griseus_chok1gshd
ENSJJAG00000015053	-	82	100.000	ENSCGRG00000012624	Polr2d	100	100.000	Cricetulus_griseus_crigri
ENSJJAG00000015053	-	100	90.278	ENSCSEG00000006147	polr2d	100	90.278	Cynoglossus_semilaevis
ENSJJAG00000015053	-	100	90.278	ENSCVAG00000000779	polr2d	100	90.278	Cyprinodon_variegatus
ENSJJAG00000015053	-	100	92.254	ENSDARG00000076509	polr2d	100	92.254	Danio_rerio
ENSJJAG00000015053	-	100	98.592	ENSDNOG00000008527	POLR2D	100	98.592	Dasypus_novemcinctus
ENSJJAG00000015053	-	100	98.592	ENSDORG00000026897	Polr2d	100	98.592	Dipodomys_ordii
ENSJJAG00000015053	-	92	77.692	FBgn0263757	Rpb4	94	77.692	Drosophila_melanogaster
ENSJJAG00000015053	-	100	92.254	ENSEBUG00000007675	polr2d	100	92.254	Eptatretus_burgeri
ENSJJAG00000015053	-	100	98.592	ENSEASG00005007103	POLR2D	100	98.592	Equus_asinus_asinus
ENSJJAG00000015053	-	100	98.592	ENSECAG00000000556	POLR2D	100	98.592	Equus_caballus
ENSJJAG00000015053	-	100	91.608	ENSELUG00000005928	polr2d	100	91.608	Esox_lucius
ENSJJAG00000015053	-	100	98.592	ENSFCAG00000027816	POLR2D	100	98.592	Felis_catus
ENSJJAG00000015053	-	100	96.479	ENSFALG00000003528	POLR2D	100	96.479	Ficedula_albicollis
ENSJJAG00000015053	-	100	97.183	ENSFDAG00000007217	POLR2D	100	97.183	Fukomys_damarensis
ENSJJAG00000015053	-	100	93.007	ENSGMOG00000001823	polr2d	99	93.007	Gadus_morhua
ENSJJAG00000015053	-	100	97.183	ENSGALG00000002057	POLR2D	100	97.183	Gallus_gallus
ENSJJAG00000015053	-	100	90.972	ENSGAFG00000016932	polr2d	71	90.972	Gambusia_affinis
ENSJJAG00000015053	-	100	88.889	ENSGACG00000004639	polr2d	100	88.889	Gasterosteus_aculeatus
ENSJJAG00000015053	-	100	95.070	ENSGAGG00000021308	POLR2D	100	95.070	Gopherus_agassizii
ENSJJAG00000015053	-	100	98.592	ENSGGOG00000004723	POLR2D	100	98.592	Gorilla_gorilla
ENSJJAG00000015053	-	100	97.887	ENSHGLG00000016570	Polr2d	100	97.887	Heterocephalus_glaber_female
ENSJJAG00000015053	-	100	97.887	ENSHGLG00100013785	Polr2d	100	97.887	Heterocephalus_glaber_male
ENSJJAG00000015053	-	100	88.028	ENSHCOG00000006425	polr2d	100	88.028	Hippocampus_comes
ENSJJAG00000015053	-	100	91.549	ENSIPUG00000011192	polr2d	100	91.549	Ictalurus_punctatus
ENSJJAG00000015053	-	100	96.479	ENSSTOG00000023329	POLR2D	100	96.479	Ictidomys_tridecemlineatus
ENSJJAG00000015053	-	85	90.909	ENSKMAG00000010677	polr2d	68	90.909	Kryptolebias_marmoratus
ENSJJAG00000015053	-	100	95.775	ENSLACG00000017253	POLR2D	100	95.775	Latimeria_chalumnae
ENSJJAG00000015053	-	100	91.667	ENSLOCG00000009106	polr2d	100	91.667	Lepisosteus_oculatus
ENSJJAG00000015053	-	100	97.887	ENSLAFG00000001848	POLR2D	100	97.887	Loxodonta_africana
ENSJJAG00000015053	-	100	98.592	ENSMFAG00000031937	POLR2D	100	98.592	Macaca_fascicularis
ENSJJAG00000015053	-	100	98.592	ENSMMUG00000001989	POLR2D	100	98.592	Macaca_mulatta
ENSJJAG00000015053	-	100	98.592	ENSMNEG00000035505	POLR2D	100	98.592	Macaca_nemestrina
ENSJJAG00000015053	-	100	98.592	ENSMLEG00000035827	POLR2D	100	98.592	Mandrillus_leucophaeus
ENSJJAG00000015053	-	100	97.183	ENSMGAG00000001248	POLR2D	100	97.183	Meleagris_gallopavo
ENSJJAG00000015053	-	100	97.887	ENSMAUG00000014518	Polr2d	100	97.887	Mesocricetus_auratus
ENSJJAG00000015053	-	100	97.887	ENSMICG00000009931	POLR2D	100	97.887	Microcebus_murinus
ENSJJAG00000015053	-	100	95.775	ENSMOCG00000019367	Polr2d	100	95.775	Microtus_ochrogaster
ENSJJAG00000015053	-	100	80.282	ENSMODG00000025033	-	100	80.282	Monodelphis_domestica
ENSJJAG00000015053	-	100	80.986	ENSMODG00000025026	-	100	80.986	Monodelphis_domestica
ENSJJAG00000015053	-	100	80.986	ENSMODG00000025027	-	100	80.986	Monodelphis_domestica
ENSJJAG00000015053	-	100	80.986	ENSMODG00000025028	-	100	80.986	Monodelphis_domestica
ENSJJAG00000015053	-	100	80.282	ENSMODG00000025029	-	100	80.282	Monodelphis_domestica
ENSJJAG00000015053	-	100	80.282	ENSMODG00000025036	-	100	80.282	Monodelphis_domestica
ENSJJAG00000015053	-	100	80.282	ENSMODG00000025035	-	100	80.282	Monodelphis_domestica
ENSJJAG00000015053	-	100	80.282	ENSMODG00000025034	-	100	80.282	Monodelphis_domestica
ENSJJAG00000015053	-	100	79.577	ENSMODG00000025032	-	100	79.577	Monodelphis_domestica
ENSJJAG00000015053	-	100	80.282	ENSMODG00000025031	-	100	80.282	Monodelphis_domestica
ENSJJAG00000015053	-	100	80.986	ENSMODG00000025030	-	100	80.986	Monodelphis_domestica
ENSJJAG00000015053	-	100	97.183	ENSMODG00000018653	-	100	97.183	Monodelphis_domestica
ENSJJAG00000015053	-	100	90.972	ENSMALG00000018266	polr2d	100	90.972	Monopterus_albus
ENSJJAG00000015053	-	100	98.592	MGP_CAROLIEiJ_G0022066	Polr2d	100	98.592	Mus_caroli
ENSJJAG00000015053	-	100	98.592	ENSMUSG00000024258	Polr2d	100	98.592	Mus_musculus
ENSJJAG00000015053	-	100	98.592	MGP_PahariEiJ_G0018800	Polr2d	100	98.592	Mus_pahari
ENSJJAG00000015053	-	100	98.592	MGP_SPRETEiJ_G0022977	Polr2d	100	98.592	Mus_spretus
ENSJJAG00000015053	-	100	98.592	ENSMPUG00000016685	POLR2D	100	98.592	Mustela_putorius_furo
ENSJJAG00000015053	-	83	100.000	ENSMLUG00000006862	POLR2D	100	100.000	Myotis_lucifugus
ENSJJAG00000015053	-	100	98.592	ENSNGAG00000014862	Polr2d	100	98.592	Nannospalax_galili
ENSJJAG00000015053	-	100	98.592	ENSNLEG00000027191	POLR2D	100	98.592	Nomascus_leucogenys
ENSJJAG00000015053	-	82	99.145	ENSOPRG00000005327	POLR2D	100	99.145	Ochotona_princeps
ENSJJAG00000015053	-	100	97.887	ENSODEG00000005262	POLR2D	100	97.887	Octodon_degus
ENSJJAG00000015053	-	100	90.972	ENSONIG00000017290	polr2d	100	90.972	Oreochromis_niloticus
ENSJJAG00000015053	-	83	99.153	ENSOANG00000013216	POLR2D	100	99.153	Ornithorhynchus_anatinus
ENSJJAG00000015053	-	100	96.479	ENSOCUG00000023403	-	100	96.479	Oryctolagus_cuniculus
ENSJJAG00000015053	-	100	91.608	ENSOCUG00000021449	-	100	91.608	Oryctolagus_cuniculus
ENSJJAG00000015053	-	100	87.500	ENSORLG00000005266	polr2d	100	87.500	Oryzias_latipes
ENSJJAG00000015053	-	100	87.500	ENSORLG00020006647	polr2d	100	87.500	Oryzias_latipes_hni
ENSJJAG00000015053	-	100	87.500	ENSORLG00015003222	polr2d	100	87.500	Oryzias_latipes_hsok
ENSJJAG00000015053	-	100	88.194	ENSOMEG00000018915	polr2d	100	88.194	Oryzias_melastigma
ENSJJAG00000015053	-	100	96.528	ENSOGAG00000017118	POLR2D	100	96.528	Otolemur_garnettii
ENSJJAG00000015053	-	100	98.592	ENSOARG00000015995	POLR2D	100	98.592	Ovis_aries
ENSJJAG00000015053	-	100	98.592	ENSPPRG00000020222	POLR2D	100	98.592	Panthera_pardus
ENSJJAG00000015053	-	100	98.592	ENSPTIG00000018618	POLR2D	100	98.592	Panthera_tigris_altaica
ENSJJAG00000015053	-	100	98.592	ENSPTRG00000012436	POLR2D	100	98.592	Pan_troglodytes
ENSJJAG00000015053	-	100	98.592	ENSPANG00000018602	POLR2D	100	98.592	Papio_anubis
ENSJJAG00000015053	-	99	92.254	ENSPKIG00000012166	polr2d	99	92.254	Paramormyrops_kingsleyae
ENSJJAG00000015053	-	83	99.153	ENSPSIG00000002873	POLR2D	100	99.153	Pelodiscus_sinensis
ENSJJAG00000015053	-	100	98.592	ENSPEMG00000018244	Polr2d	100	98.592	Peromyscus_maniculatus_bairdii
ENSJJAG00000015053	-	100	88.028	ENSPMAG00000005021	polr2d	99	88.028	Petromyzon_marinus
ENSJJAG00000015053	-	100	90.972	ENSPFOG00000008969	polr2d	100	90.972	Poecilia_formosa
ENSJJAG00000015053	-	100	90.972	ENSPLAG00000017210	polr2d	100	90.972	Poecilia_latipinna
ENSJJAG00000015053	-	100	90.972	ENSPMEG00000005160	polr2d	100	90.972	Poecilia_mexicana
ENSJJAG00000015053	-	73	95.192	ENSPREG00000021862	polr2d	100	95.192	Poecilia_reticulata
ENSJJAG00000015053	-	100	98.592	ENSPPYG00000012759	POLR2D	100	98.592	Pongo_abelii
ENSJJAG00000015053	-	100	97.887	ENSPCAG00000001396	POLR2D	100	97.887	Procavia_capensis
ENSJJAG00000015053	-	100	97.887	ENSPCOG00000022076	POLR2D	100	97.887	Propithecus_coquereli
ENSJJAG00000015053	-	100	97.887	ENSPVAG00000004002	POLR2D	100	97.887	Pteropus_vampyrus
ENSJJAG00000015053	-	100	91.608	ENSPNAG00000018246	polr2d	100	91.608	Pygocentrus_nattereri
ENSJJAG00000015053	-	100	98.592	ENSRNOG00000016231	Polr2d	100	98.592	Rattus_norvegicus
ENSJJAG00000015053	-	100	98.592	ENSRBIG00000039326	POLR2D	100	98.592	Rhinopithecus_bieti
ENSJJAG00000015053	-	100	98.592	ENSRROG00000023289	POLR2D	100	98.592	Rhinopithecus_roxellana
ENSJJAG00000015053	-	100	96.479	ENSSHAG00000014817	-	100	96.479	Sarcophilus_harrisii
ENSJJAG00000015053	-	92	96.183	ENSSFOG00015024204	polr2d	100	90.972	Scleropages_formosus
ENSJJAG00000015053	-	100	90.972	ENSSDUG00000006060	polr2d	100	90.972	Seriola_dumerili
ENSJJAG00000015053	-	95	93.333	ENSSLDG00000024485	polr2d	100	90.345	Seriola_lalandi_dorsalis
ENSJJAG00000015053	-	82	99.145	ENSSARG00000009037	POLR2D	100	99.145	Sorex_araneus
ENSJJAG00000015053	-	100	97.183	ENSSPUG00000014915	POLR2D	100	97.183	Sphenodon_punctatus
ENSJJAG00000015053	-	100	90.972	ENSSPAG00000013386	polr2d	100	90.972	Stegastes_partitus
ENSJJAG00000015053	-	100	98.592	ENSSSCG00000039230	POLR2D	100	98.592	Sus_scrofa
ENSJJAG00000015053	-	100	97.183	ENSTGUG00000005773	POLR2D	99	97.183	Taeniopygia_guttata
ENSJJAG00000015053	-	100	90.845	ENSTRUG00000004740	polr2d	100	90.845	Takifugu_rubripes
ENSJJAG00000015053	-	99	92.199	ENSTNIG00000011210	polr2d	99	92.199	Tetraodon_nigroviridis
ENSJJAG00000015053	-	82	100.000	ENSTBEG00000006081	POLR2D	100	100.000	Tupaia_belangeri
ENSJJAG00000015053	-	82	100.000	ENSTTRG00000010055	POLR2D	100	100.000	Tursiops_truncatus
ENSJJAG00000015053	-	92	99.231	ENSUAMG00000024374	POLR2D	98	99.231	Ursus_americanus
ENSJJAG00000015053	-	98	88.489	ENSUMAG00000008280	POLR2D	100	100.000	Ursus_maritimus
ENSJJAG00000015053	-	82	100.000	ENSVPAG00000007239	POLR2D	100	100.000	Vicugna_pacos
ENSJJAG00000015053	-	100	98.592	ENSVVUG00000008616	POLR2D	100	98.592	Vulpes_vulpes
ENSJJAG00000015053	-	100	90.845	ENSXETG00000002955	polr2d	100	90.845	Xenopus_tropicalis
ENSJJAG00000015053	-	73	95.192	ENSXCOG00000012668	polr2d	100	95.192	Xiphophorus_couchianus
ENSJJAG00000015053	-	73	95.192	ENSXMAG00000014031	polr2d	100	95.192	Xiphophorus_maculatus