EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000015343 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 3767 bases
Position: chrJH725495.1:6750886-6754652
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000012269	Anticodon_1	PF08264.13	4.2e-23	1	1
ENSJJAP00000012273	Anticodon_1	PF08264.13	4.2e-23	1	1
ENSJJAP00000012273	tRNA-synt_1	PF00133.22	1.8e-125	1	2
ENSJJAP00000012273	tRNA-synt_1	PF00133.22	1.8e-125	2	2
ENSJJAP00000012269	tRNA-synt_1	PF00133.22	1.6e-117	1	2
ENSJJAP00000012269	tRNA-synt_1	PF00133.22	1.6e-117	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000018753	-	3321	-	ENSJJAP00000012269	1106 (aa)	-	-
ENSJJAT00000018757	-	3351	-	ENSJJAP00000012273	1116 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000015343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000015343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000015343	-	100	77.831	ENSJJAG00000019749	-	100	77.276
ENSJJAG00000015343	-	87	41.093	ENSJJAG00000011144	Vars2	98	41.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000015343	-	100	71.835	ENSG00000204394	VARS	100	71.835	Homo_sapiens
ENSJJAG00000015343	-	96	54.476	ENSAPOG00000020691	vars	99	52.065	Acanthochromis_polyacanthus
ENSJJAG00000015343	-	96	54.476	ENSAPOG00000020921	vars	99	52.065	Acanthochromis_polyacanthus
ENSJJAG00000015343	-	99	73.917	ENSAMEG00000006417	VARS	100	72.727	Ailuropoda_melanoleuca
ENSJJAG00000015343	-	100	53.639	ENSACIG00000013752	vars	100	53.591	Amphilophus_citrinellus
ENSJJAG00000015343	-	100	52.512	ENSAOCG00000002447	vars	100	52.423	Amphiprion_ocellaris
ENSJJAG00000015343	-	100	52.355	ENSAPEG00000010638	vars	99	52.355	Amphiprion_percula
ENSJJAG00000015343	-	98	55.012	ENSATEG00000020219	vars	100	52.782	Anabas_testudineus
ENSJJAG00000015343	-	88	60.388	ENSACAG00000029133	-	95	60.276	Anolis_carolinensis
ENSJJAG00000015343	-	99	73.333	ENSANAG00000015453	VARS	100	72.468	Aotus_nancymaae
ENSJJAG00000015343	-	98	54.739	ENSACLG00000025699	vars	97	52.771	Astatotilapia_calliptera
ENSJJAG00000015343	-	95	53.463	ENSAMXG00000017716	vars	95	53.547	Astyanax_mexicanus
ENSJJAG00000015343	-	99	73.414	ENSBTAG00000005631	VARS	100	72.231	Bos_taurus
ENSJJAG00000015343	-	100	71.994	ENSCJAG00000002604	VARS	100	71.994	Callithrix_jacchus
ENSJJAG00000015343	-	99	73.253	ENSCAFG00000000636	VARS	100	72.073	Canis_familiaris
ENSJJAG00000015343	-	94	73.648	ENSCAFG00020020790	VARS	96	72.504	Canis_lupus_dingo
ENSJJAG00000015343	-	99	73.333	ENSCHIG00000011008	VARS	100	72.152	Capra_hircus
ENSJJAG00000015343	-	100	72.785	ENSTSYG00000001567	VARS	100	72.785	Carlito_syrichta
ENSJJAG00000015343	-	94	73.962	ENSCAPG00000013736	VARS	99	74.048	Cavia_aperea
ENSJJAG00000015343	-	100	74.162	ENSCPOG00000000870	VARS	100	71.440	Cavia_porcellus
ENSJJAG00000015343	-	99	73.515	ENSCCAG00000035656	VARS	100	78.358	Cebus_capucinus
ENSJJAG00000015343	-	100	72.468	ENSCATG00000022394	VARS	100	74.201	Cercocebus_atys
ENSJJAG00000015343	-	92	71.331	ENSCLAG00000009470	VARS	95	71.587	Chinchilla_lanigera
ENSJJAG00000015343	-	100	72.627	ENSCSAG00000008784	VARS	100	72.152	Chlorocebus_sabaeus
ENSJJAG00000015343	-	79	60.600	ENSCPBG00000007943	VARS	96	60.393	Chrysemys_picta_bellii
ENSJJAG00000015343	-	99	73.494	ENSCANG00000033570	VARS	100	72.152	Colobus_angolensis_palliatus
ENSJJAG00000015343	-	99	73.414	ENSCGRG00001005686	Vars	100	72.547	Cricetulus_griseus_chok1gshd
ENSJJAG00000015343	-	95	70.578	ENSCGRG00000013352	Vars	78	71.249	Cricetulus_griseus_crigri
ENSJJAG00000015343	-	98	53.571	ENSCSEG00000019652	vars	100	51.672	Cynoglossus_semilaevis
ENSJJAG00000015343	-	98	54.902	ENSCVAG00000022398	vars	100	53.042	Cyprinodon_variegatus
ENSJJAG00000015343	-	98	54.041	ENSDARG00000044575	vars	95	54.836	Danio_rerio
ENSJJAG00000015343	-	85	75.981	ENSDORG00000016433	Vars	94	76.077	Dipodomys_ordii
ENSJJAG00000015343	-	72	72.333	ENSETEG00000003824	VARS	77	72.333	Echinops_telfairi
ENSJJAG00000015343	-	59	51.648	ENSEBUG00000004637	vars	100	51.923	Eptatretus_burgeri
ENSJJAG00000015343	-	99	73.815	ENSEASG00005015673	VARS	100	72.706	Equus_asinus_asinus
ENSJJAG00000015343	-	99	73.676	ENSECAG00000014620	VARS	100	72.490	Equus_caballus
ENSJJAG00000015343	-	74	73.846	ENSEEUG00000004116	VARS	81	72.318	Erinaceus_europaeus
ENSJJAG00000015343	-	100	51.869	ENSELUG00000006550	vars	97	52.377	Esox_lucius
ENSJJAG00000015343	-	99	73.333	ENSFCAG00000004510	VARS	100	72.073	Felis_catus
ENSJJAG00000015343	-	85	76.082	ENSFDAG00000011401	VARS	99	76.082	Fukomys_damarensis
ENSJJAG00000015343	-	99	54.233	ENSFHEG00000010672	vars	100	53.198	Fundulus_heteroclitus
ENSJJAG00000015343	-	100	52.102	ENSGMOG00000014908	vars	100	52.328	Gadus_morhua
ENSJJAG00000015343	-	99	54.802	ENSGAFG00000021630	vars	100	53.323	Gambusia_affinis
ENSJJAG00000015343	-	100	52.038	ENSGACG00000009601	vars	98	54.667	Gasterosteus_aculeatus
ENSJJAG00000015343	-	50	54.870	ENSGAGG00000006508	-	91	54.634	Gopherus_agassizii
ENSJJAG00000015343	-	100	72.468	ENSGGOG00000011364	VARS	100	71.994	Gorilla_gorilla
ENSJJAG00000015343	-	98	54.739	ENSHBUG00000017151	vars	97	52.771	Haplochromis_burtoni
ENSJJAG00000015343	-	100	71.259	ENSHGLG00000011646	VARS	100	70.863	Heterocephalus_glaber_female
ENSJJAG00000015343	-	96	67.249	ENSHGLG00100018062	VARS	100	68.132	Heterocephalus_glaber_male
ENSJJAG00000015343	-	98	53.922	ENSHCOG00000012198	vars	99	52.113	Hippocampus_comes
ENSJJAG00000015343	-	100	52.665	ENSIPUG00000005218	vars	95	54.962	Ictalurus_punctatus
ENSJJAG00000015343	-	100	73.518	ENSSTOG00000013112	VARS	100	73.123	Ictidomys_tridecemlineatus
ENSJJAG00000015343	-	99	54.426	ENSKMAG00000009455	vars	100	52.468	Kryptolebias_marmoratus
ENSJJAG00000015343	-	100	56.870	ENSLBEG00000010341	vars	100	52.313	Labrus_bergylta
ENSJJAG00000015343	-	95	51.681	ENSLACG00000015232	VARS	99	52.269	Latimeria_chalumnae
ENSJJAG00000015343	-	100	53.883	ENSLOCG00000004240	vars	100	54.193	Lepisosteus_oculatus
ENSJJAG00000015343	-	99	73.392	ENSLAFG00000023090	VARS	100	71.813	Loxodonta_africana
ENSJJAG00000015343	-	100	72.627	ENSMFAG00000001032	VARS	100	72.152	Macaca_fascicularis
ENSJJAG00000015343	-	100	72.627	ENSMMUG00000006828	VARS	100	72.152	Macaca_mulatta
ENSJJAG00000015343	-	100	72.785	ENSMNEG00000042072	VARS	100	72.310	Macaca_nemestrina
ENSJJAG00000015343	-	100	72.627	ENSMLEG00000039307	VARS	100	72.152	Mandrillus_leucophaeus
ENSJJAG00000015343	-	98	54.319	ENSMAMG00000003949	vars	100	52.471	Mastacembelus_armatus
ENSJJAG00000015343	-	98	54.739	ENSMZEG00005018327	vars	100	52.392	Maylandia_zebra
ENSJJAG00000015343	-	99	73.574	ENSMAUG00000006715	Vars	100	72.706	Mesocricetus_auratus
ENSJJAG00000015343	-	100	72.231	ENSMICG00000003548	VARS	100	78.109	Microcebus_murinus
ENSJJAG00000015343	-	99	72.026	ENSMOCG00000015404	Vars	100	70.784	Microtus_ochrogaster
ENSJJAG00000015343	-	98	54.081	ENSMMOG00000015801	vars	95	54.191	Mola_mola
ENSJJAG00000015343	-	98	69.659	ENSMODG00000015204	-	100	66.535	Monodelphis_domestica
ENSJJAG00000015343	-	98	54.395	ENSMALG00000022532	vars	99	52.407	Monopterus_albus
ENSJJAG00000015343	-	99	74.357	MGP_CAROLIEiJ_G0021491	Vars	100	73.080	Mus_caroli
ENSJJAG00000015343	-	99	74.196	ENSMUSG00000007029	Vars	100	72.922	Mus_musculus
ENSJJAG00000015343	-	100	73.159	MGP_PahariEiJ_G0020486	Vars	100	72.922	Mus_pahari
ENSJJAG00000015343	-	100	73.397	MGP_SPRETEiJ_G0022396	Vars	100	73.001	Mus_spretus
ENSJJAG00000015343	-	99	73.735	ENSMPUG00000010821	VARS	100	72.627	Mustela_putorius_furo
ENSJJAG00000015343	-	77	73.065	ENSMLUG00000013126	VARS	100	71.457	Myotis_lucifugus
ENSJJAG00000015343	-	100	73.159	ENSNGAG00000012151	Vars	100	73.576	Nannospalax_galili
ENSJJAG00000015343	-	98	54.575	ENSNBRG00000020520	vars	100	52.615	Neolamprologus_brichardi
ENSJJAG00000015343	-	100	71.519	ENSNLEG00000006351	VARS	100	72.816	Nomascus_leucogenys
ENSJJAG00000015343	-	98	66.584	ENSMEUG00000011378	VARS	100	64.082	Notamacropus_eugenii
ENSJJAG00000015343	-	99	72.771	ENSOPRG00000003607	VARS	100	71.756	Ochotona_princeps
ENSJJAG00000015343	-	100	73.732	ENSODEG00000017681	VARS	100	71.101	Octodon_degus
ENSJJAG00000015343	-	100	52.960	ENSONIG00000013064	vars	99	56.510	Oreochromis_niloticus
ENSJJAG00000015343	-	83	63.793	ENSOANG00000005400	VARS	100	61.733	Ornithorhynchus_anatinus
ENSJJAG00000015343	-	100	70.198	ENSOCUG00000022463	VARS	100	69.992	Oryctolagus_cuniculus
ENSJJAG00000015343	-	100	52.799	ENSORLG00000013063	vars	100	52.987	Oryzias_latipes
ENSJJAG00000015343	-	100	52.914	ENSORLG00020003504	vars	100	53.178	Oryzias_latipes_hni
ENSJJAG00000015343	-	100	53.167	ENSORLG00015009001	vars	100	53.432	Oryzias_latipes_hsok
ENSJJAG00000015343	-	99	54.633	ENSOMEG00000015016	vars	100	53.220	Oryzias_melastigma
ENSJJAG00000015343	-	99	73.494	ENSOGAG00000007515	VARS	100	71.835	Otolemur_garnettii
ENSJJAG00000015343	-	100	72.073	ENSPPAG00000034012	VARS	100	72.073	Pan_paniscus
ENSJJAG00000015343	-	99	73.494	ENSPPRG00000014855	VARS	100	72.231	Panthera_pardus
ENSJJAG00000015343	-	88	75.651	ENSPTIG00000010462	VARS	95	76.282	Panthera_tigris_altaica
ENSJJAG00000015343	-	100	72.073	ENSPTRG00000017985	VARS	100	72.073	Pan_troglodytes
ENSJJAG00000015343	-	100	71.080	ENSPANG00000014565	VARS	100	70.607	Papio_anubis
ENSJJAG00000015343	-	100	51.835	ENSPKIG00000016304	vars	100	52.106	Paramormyrops_kingsleyae
ENSJJAG00000015343	-	100	53.137	ENSPMGG00000023909	vars	100	53.217	Periophthalmus_magnuspinnatus
ENSJJAG00000015343	-	99	73.735	ENSPEMG00000006639	Vars	100	72.785	Peromyscus_maniculatus_bairdii
ENSJJAG00000015343	-	98	69.742	ENSPCIG00000018553	VARS	100	66.614	Phascolarctos_cinereus
ENSJJAG00000015343	-	99	54.964	ENSPFOG00000015690	vars	100	53.479	Poecilia_formosa
ENSJJAG00000015343	-	99	55.184	ENSPLAG00000009590	vars	100	53.557	Poecilia_latipinna
ENSJJAG00000015343	-	99	54.964	ENSPMEG00000004708	vars	100	53.479	Poecilia_mexicana
ENSJJAG00000015343	-	99	53.388	ENSPREG00000013264	vars	100	51.585	Poecilia_reticulata
ENSJJAG00000015343	-	99	71.888	ENSPPYG00000016460	VARS	100	70.411	Pongo_abelii
ENSJJAG00000015343	-	85	72.890	ENSPCAG00000013565	VARS	86	72.890	Procavia_capensis
ENSJJAG00000015343	-	100	72.411	ENSPCOG00000010942	VARS	100	72.411	Propithecus_coquereli
ENSJJAG00000015343	-	100	70.016	ENSPVAG00000012403	VARS	100	69.383	Pteropus_vampyrus
ENSJJAG00000015343	-	98	54.739	ENSPNYG00000022511	vars	100	52.771	Pundamilia_nyererei
ENSJJAG00000015343	-	99	54.073	ENSPNAG00000020962	vars	100	52.660	Pygocentrus_nattereri
ENSJJAG00000015343	-	99	74.378	ENSRNOG00000000867	Vars	100	73.101	Rattus_norvegicus
ENSJJAG00000015343	-	100	72.627	ENSRBIG00000041669	VARS	100	74.693	Rhinopithecus_bieti
ENSJJAG00000015343	-	100	72.627	ENSRROG00000045490	VARS	100	72.152	Rhinopithecus_roxellana
ENSJJAG00000015343	-	100	71.994	ENSSBOG00000035402	VARS	100	71.994	Saimiri_boliviensis_boliviensis
ENSJJAG00000015343	-	94	67.703	ENSSHAG00000006937	VARS	100	63.328	Sarcophilus_harrisii
ENSJJAG00000015343	-	100	52.194	ENSSFOG00015014272	vars	100	52.116	Scleropages_formosus
ENSJJAG00000015343	-	100	51.603	ENSSMAG00000009596	vars	99	51.794	Scophthalmus_maximus
ENSJJAG00000015343	-	100	52.147	ENSSDUG00000014177	vars	100	52.259	Seriola_dumerili
ENSJJAG00000015343	-	100	52.147	ENSSLDG00000025316	vars	100	52.259	Seriola_lalandi_dorsalis
ENSJJAG00000015343	-	100	52.669	ENSSPAG00000017068	vars	100	52.669	Stegastes_partitus
ENSJJAG00000015343	-	99	72.392	ENSSSCG00000038950	VARS	100	71.146	Sus_scrofa
ENSJJAG00000015343	-	81	54.286	ENSTRUG00000012307	vars	98	52.534	Takifugu_rubripes
ENSJJAG00000015343	-	100	52.118	ENSTNIG00000008011	vars	100	52.392	Tetraodon_nigroviridis
ENSJJAG00000015343	-	50	85.294	ENSTBEG00000004728	-	58	75.610	Tupaia_belangeri
ENSJJAG00000015343	-	100	67.866	ENSTTRG00000014128	VARS	100	65.269	Tursiops_truncatus
ENSJJAG00000015343	-	100	71.940	ENSUAMG00000010424	VARS	100	71.542	Ursus_americanus
ENSJJAG00000015343	-	100	67.390	ENSUMAG00000013486	VARS	100	66.988	Ursus_maritimus
ENSJJAG00000015343	-	99	73.676	ENSVVUG00000021323	VARS	100	72.174	Vulpes_vulpes
ENSJJAG00000015343	-	98	53.251	ENSXETG00000024076	vars	96	53.636	Xenopus_tropicalis
ENSJJAG00000015343	-	99	54.894	ENSXCOG00000019172	vars	100	53.402	Xiphophorus_couchianus
ENSJJAG00000015343	-	99	54.633	ENSXMAG00000010927	vars	100	53.167	Xiphophorus_maculatus