EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000015513 (Gene tree)
Gene ID: 101607234
Gene Symbol: Lsg1
Alias: D16Bwg1547e
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 32418 bases
Position: chrJH725450.1:10423752-10456169
Accession: 101607234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000012497	MMR_HSR1	PF01926.23	3.6e-14	1	1
ENSJJAP00000012501	MMR_HSR1	PF01926.23	3.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000018981	-	1965	XM_004654537	ENSJJAP00000012497	654 (aa)	XP_004654594	-
ENSJJAT00000018985	-	1920	-	ENSJJAP00000012501	639 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000015513's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000015513's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000015513	Lsg1	100	80.514	ENSG00000041802	LSG1	98	88.506	Homo_sapiens
ENSJJAG00000015513	Lsg1	99	66.355	ENSAPOG00000009694	lsg1	99	66.667	Acanthochromis_polyacanthus
ENSJJAG00000015513	Lsg1	99	79.848	ENSAMEG00000009343	LSG1	99	79.848	Ailuropoda_melanoleuca
ENSJJAG00000015513	Lsg1	98	65.931	ENSACIG00000012406	lsg1	99	66.248	Amphilophus_citrinellus
ENSJJAG00000015513	Lsg1	99	65.781	ENSAOCG00000016066	lsg1	99	66.094	Amphiprion_ocellaris
ENSJJAG00000015513	Lsg1	99	66.250	ENSAPEG00000003252	lsg1	99	66.250	Amphiprion_percula
ENSJJAG00000015513	Lsg1	98	65.561	ENSATEG00000011794	lsg1	99	66.301	Anabas_testudineus
ENSJJAG00000015513	Lsg1	95	65.501	ENSACAG00000004222	LSG1	99	65.127	Anolis_carolinensis
ENSJJAG00000015513	Lsg1	100	81.420	ENSANAG00000021153	LSG1	100	81.420	Aotus_nancymaae
ENSJJAG00000015513	Lsg1	99	64.286	ENSACLG00000000520	lsg1	99	63.982	Astatotilapia_calliptera
ENSJJAG00000015513	Lsg1	99	64.506	ENSAMXG00000008271	lsg1	99	64.869	Astyanax_mexicanus
ENSJJAG00000015513	Lsg1	100	78.473	ENSBTAG00000008461	LSG1	100	78.723	Bos_taurus
ENSJJAG00000015513	Lsg1	61	52.261	WBGene00016907	C53H9.2	88	52.261	Caenorhabditis_elegans
ENSJJAG00000015513	Lsg1	100	80.967	ENSCJAG00000013962	LSG1	100	80.967	Callithrix_jacchus
ENSJJAG00000015513	Lsg1	95	79.904	ENSCAFG00000013445	LSG1	99	79.904	Canis_familiaris
ENSJJAG00000015513	Lsg1	99	78.116	ENSCAFG00020002216	LSG1	99	79.677	Canis_lupus_dingo
ENSJJAG00000015513	Lsg1	99	79.268	ENSCHIG00000015769	LSG1	99	79.268	Capra_hircus
ENSJJAG00000015513	Lsg1	100	81.420	ENSTSYG00000001447	LSG1	100	81.420	Carlito_syrichta
ENSJJAG00000015513	Lsg1	95	76.923	ENSCAPG00000009856	LSG1	100	76.923	Cavia_aperea
ENSJJAG00000015513	Lsg1	100	80.514	ENSCCAG00000035744	LSG1	100	80.514	Cebus_capucinus
ENSJJAG00000015513	Lsg1	100	80.967	ENSCATG00000042060	LSG1	100	79.638	Cercocebus_atys
ENSJJAG00000015513	Lsg1	100	81.269	ENSCSAG00000008796	LSG1	92	81.269	Chlorocebus_sabaeus
ENSJJAG00000015513	Lsg1	99	68.429	ENSCPBG00000015941	LSG1	83	68.429	Chrysemys_picta_bellii
ENSJJAG00000015513	Lsg1	70	59.898	ENSCING00000007079	-	89	67.857	Ciona_intestinalis
ENSJJAG00000015513	Lsg1	80	55.378	ENSCSAVG00000002514	-	86	66.092	Ciona_savignyi
ENSJJAG00000015513	Lsg1	100	80.816	ENSCANG00000030709	LSG1	100	80.816	Colobus_angolensis_palliatus
ENSJJAG00000015513	Lsg1	100	82.481	ENSCGRG00001019846	Lsg1	100	82.901	Cricetulus_griseus_chok1gshd
ENSJJAG00000015513	Lsg1	100	82.290	ENSCGRG00000014617	Lsg1	100	82.901	Cricetulus_griseus_crigri
ENSJJAG00000015513	Lsg1	98	66.035	ENSCSEG00000008522	lsg1	99	65.474	Cynoglossus_semilaevis
ENSJJAG00000015513	Lsg1	97	66.720	ENSCVAG00000002484	lsg1	99	67.241	Cyprinodon_variegatus
ENSJJAG00000015513	Lsg1	99	66.252	ENSDARG00000015352	lsg1	99	66.096	Danio_rerio
ENSJJAG00000015513	Lsg1	100	78.182	ENSDNOG00000006224	LSG1	100	77.879	Dasypus_novemcinctus
ENSJJAG00000015513	Lsg1	99	48.913	FBgn0266284	Ns3	99	48.447	Drosophila_melanogaster
ENSJJAG00000015513	Lsg1	88	85.333	ENSETEG00000003888	LSG1	89	85.333	Echinops_telfairi
ENSJJAG00000015513	Lsg1	88	58.305	ENSEBUG00000003119	lsg1	84	57.922	Eptatretus_burgeri
ENSJJAG00000015513	Lsg1	100	80.816	ENSEASG00005000678	LSG1	100	80.816	Equus_asinus_asinus
ENSJJAG00000015513	Lsg1	100	81.118	ENSECAG00000017659	LSG1	100	81.118	Equus_caballus
ENSJJAG00000015513	Lsg1	86	81.739	ENSEEUG00000015217	LSG1	87	81.739	Erinaceus_europaeus
ENSJJAG00000015513	Lsg1	99	63.101	ENSELUG00000023973	lsg1	99	62.791	Esox_lucius
ENSJJAG00000015513	Lsg1	99	79.123	ENSFCAG00000024957	LSG1	99	79.123	Felis_catus
ENSJJAG00000015513	Lsg1	92	66.069	ENSFALG00000007210	LSG1	94	66.069	Ficedula_albicollis
ENSJJAG00000015513	Lsg1	100	77.538	ENSFDAG00000017373	LSG1	100	77.538	Fukomys_damarensis
ENSJJAG00000015513	Lsg1	97	65.501	ENSFHEG00000003680	lsg1	99	65.480	Fundulus_heteroclitus
ENSJJAG00000015513	Lsg1	98	62.041	ENSGMOG00000015834	lsg1	87	71.825	Gadus_morhua
ENSJJAG00000015513	Lsg1	99	62.556	ENSGALG00000007058	LSG1	87	63.746	Gallus_gallus
ENSJJAG00000015513	Lsg1	97	65.869	ENSGAFG00000015831	lsg1	99	66.149	Gambusia_affinis
ENSJJAG00000015513	Lsg1	98	64.706	ENSGACG00000009323	lsg1	99	64.330	Gasterosteus_aculeatus
ENSJJAG00000015513	Lsg1	100	80.967	ENSGGOG00000000520	LSG1	100	80.967	Gorilla_gorilla
ENSJJAG00000015513	Lsg1	99	65.586	ENSHBUG00000005659	lsg1	99	65.278	Haplochromis_burtoni
ENSJJAG00000015513	Lsg1	100	78.428	ENSHGLG00000017390	LSG1	100	78.615	Heterocephalus_glaber_female
ENSJJAG00000015513	Lsg1	100	78.428	ENSHGLG00100018587	LSG1	100	78.615	Heterocephalus_glaber_male
ENSJJAG00000015513	Lsg1	97	64.139	ENSHCOG00000016848	lsg1	99	64.154	Hippocampus_comes
ENSJJAG00000015513	Lsg1	99	65.884	ENSIPUG00000008631	lsg1	99	65.884	Ictalurus_punctatus
ENSJJAG00000015513	Lsg1	80	75.665	ENSSTOG00000010234	LSG1	99	75.842	Ictidomys_tridecemlineatus
ENSJJAG00000015513	Lsg1	98	64.904	ENSKMAG00000009681	lsg1	99	64.835	Kryptolebias_marmoratus
ENSJJAG00000015513	Lsg1	98	64.434	ENSLBEG00000024261	lsg1	99	63.893	Labrus_bergylta
ENSJJAG00000015513	Lsg1	99	64.361	ENSLACG00000013399	LSG1	99	64.361	Latimeria_chalumnae
ENSJJAG00000015513	Lsg1	98	66.980	ENSLOCG00000004918	lsg1	99	67.127	Lepisosteus_oculatus
ENSJJAG00000015513	Lsg1	100	79.199	ENSLAFG00000012919	-	100	79.199	Loxodonta_africana
ENSJJAG00000015513	Lsg1	100	81.118	ENSMFAG00000039903	LSG1	100	79.789	Macaca_fascicularis
ENSJJAG00000015513	Lsg1	100	81.269	ENSMMUG00000010708	LSG1	100	81.269	Macaca_mulatta
ENSJJAG00000015513	Lsg1	100	80.967	ENSMNEG00000031538	LSG1	100	79.607	Macaca_nemestrina
ENSJJAG00000015513	Lsg1	100	81.269	ENSMLEG00000041184	LSG1	100	81.269	Mandrillus_leucophaeus
ENSJJAG00000015513	Lsg1	99	64.642	ENSMAMG00000000470	lsg1	99	64.275	Mastacembelus_armatus
ENSJJAG00000015513	Lsg1	99	65.741	ENSMZEG00005017865	lsg1	99	65.432	Maylandia_zebra
ENSJJAG00000015513	Lsg1	88	64.189	ENSMGAG00000007050	LSG1	99	65.705	Meleagris_gallopavo
ENSJJAG00000015513	Lsg1	91	80.579	ENSMAUG00000016976	Lsg1	93	80.750	Mesocricetus_auratus
ENSJJAG00000015513	Lsg1	100	79.154	ENSMICG00000049087	LSG1	100	79.154	Microcebus_murinus
ENSJJAG00000015513	Lsg1	100	82.648	ENSMOCG00000022136	Lsg1	100	82.192	Microtus_ochrogaster
ENSJJAG00000015513	Lsg1	98	63.942	ENSMMOG00000008884	lsg1	99	64.207	Mola_mola
ENSJJAG00000015513	Lsg1	99	58.797	ENSMODG00000019828	LSG1	99	58.045	Monodelphis_domestica
ENSJJAG00000015513	Lsg1	99	81.550	MGP_CAROLIEiJ_G0020648	Lsg1	99	82.171	Mus_caroli
ENSJJAG00000015513	Lsg1	99	81.860	ENSMUSG00000022538	Lsg1	99	82.636	Mus_musculus
ENSJJAG00000015513	Lsg1	98	82.399	MGP_PahariEiJ_G0016352	Lsg1	99	82.615	Mus_pahari
ENSJJAG00000015513	Lsg1	99	82.326	MGP_SPRETEiJ_G0021544	Lsg1	99	82.636	Mus_spretus
ENSJJAG00000015513	Lsg1	99	78.485	ENSMPUG00000003734	LSG1	99	78.485	Mustela_putorius_furo
ENSJJAG00000015513	Lsg1	99	82.848	ENSMLUG00000012548	LSG1	99	82.848	Myotis_lucifugus
ENSJJAG00000015513	Lsg1	100	81.346	ENSNGAG00000021872	Lsg1	100	81.346	Nannospalax_galili
ENSJJAG00000015513	Lsg1	100	81.571	ENSNLEG00000008293	LSG1	100	81.571	Nomascus_leucogenys
ENSJJAG00000015513	Lsg1	69	71.134	ENSMEUG00000009041	-	81	71.134	Notamacropus_eugenii
ENSJJAG00000015513	Lsg1	99	65.432	ENSONIG00000002635	lsg1	99	65.692	Oreochromis_niloticus
ENSJJAG00000015513	Lsg1	95	72.142	ENSOANG00000012742	LSG1	99	71.337	Ornithorhynchus_anatinus
ENSJJAG00000015513	Lsg1	100	81.269	ENSOCUG00000004817	LSG1	100	81.269	Oryctolagus_cuniculus
ENSJJAG00000015513	Lsg1	98	64.103	ENSORLG00000007695	lsg1	99	64.050	Oryzias_latipes
ENSJJAG00000015513	Lsg1	98	64.423	ENSORLG00020016286	lsg1	99	63.893	Oryzias_latipes_hni
ENSJJAG00000015513	Lsg1	98	63.782	ENSORLG00015012025	lsg1	99	63.453	Oryzias_latipes_hsok
ENSJJAG00000015513	Lsg1	98	64.583	ENSOMEG00000022379	lsg1	99	64.050	Oryzias_melastigma
ENSJJAG00000015513	Lsg1	100	80.723	ENSOGAG00000003475	LSG1	100	80.723	Otolemur_garnettii
ENSJJAG00000015513	Lsg1	99	77.948	ENSOARG00000020403	LSG1	99	78.354	Ovis_aries
ENSJJAG00000015513	Lsg1	100	80.514	ENSPPAG00000029271	LSG1	100	80.514	Pan_paniscus
ENSJJAG00000015513	Lsg1	99	79.248	ENSPPRG00000010281	LSG1	99	79.248	Panthera_pardus
ENSJJAG00000015513	Lsg1	99	79.123	ENSPTIG00000010789	LSG1	99	79.123	Panthera_tigris_altaica
ENSJJAG00000015513	Lsg1	100	80.363	ENSPTRG00000015760	LSG1	100	80.363	Pan_troglodytes
ENSJJAG00000015513	Lsg1	100	81.420	ENSPANG00000018249	LSG1	100	80.090	Papio_anubis
ENSJJAG00000015513	Lsg1	97	64.873	ENSPKIG00000002895	lsg1	100	64.715	Paramormyrops_kingsleyae
ENSJJAG00000015513	Lsg1	96	65.463	ENSPSIG00000009821	LSG1	99	64.882	Pelodiscus_sinensis
ENSJJAG00000015513	Lsg1	95	66.612	ENSPMGG00000000931	lsg1	99	66.118	Periophthalmus_magnuspinnatus
ENSJJAG00000015513	Lsg1	100	82.192	ENSPEMG00000012082	-	100	81.887	Peromyscus_maniculatus_bairdii
ENSJJAG00000015513	Lsg1	99	59.145	ENSPMAG00000007451	lsg1	99	59.639	Petromyzon_marinus
ENSJJAG00000015513	Lsg1	98	66.667	ENSPCIG00000013890	LSG1	82	66.667	Phascolarctos_cinereus
ENSJJAG00000015513	Lsg1	97	66.508	ENSPFOG00000021882	lsg1	99	66.096	Poecilia_formosa
ENSJJAG00000015513	Lsg1	97	65.714	ENSPLAG00000019536	lsg1	99	65.528	Poecilia_latipinna
ENSJJAG00000015513	Lsg1	97	65.823	ENSPMEG00000017281	lsg1	99	65.426	Poecilia_mexicana
ENSJJAG00000015513	Lsg1	97	55.469	ENSPREG00000006048	lsg1	99	55.793	Poecilia_reticulata
ENSJJAG00000015513	Lsg1	92	78.887	ENSPPYG00000014425	LSG1	100	78.069	Pongo_abelii
ENSJJAG00000015513	Lsg1	90	82.667	ENSPCAG00000005511	LSG1	90	82.667	Procavia_capensis
ENSJJAG00000015513	Lsg1	100	80.363	ENSPCOG00000012360	LSG1	100	80.363	Propithecus_coquereli
ENSJJAG00000015513	Lsg1	99	64.286	ENSPNYG00000021994	lsg1	99	63.982	Pundamilia_nyererei
ENSJJAG00000015513	Lsg1	99	65.485	ENSPNAG00000015533	lsg1	99	65.224	Pygocentrus_nattereri
ENSJJAG00000015513	Lsg1	99	82.012	ENSRNOG00000001727	Lsg1	99	82.012	Rattus_norvegicus
ENSJJAG00000015513	Lsg1	100	80.665	ENSRBIG00000029053	LSG1	100	80.665	Rhinopithecus_bieti
ENSJJAG00000015513	Lsg1	100	80.665	ENSRROG00000037702	LSG1	100	80.665	Rhinopithecus_roxellana
ENSJJAG00000015513	Lsg1	64	56.471	YGL099W	LSG1	65	56.471	Saccharomyces_cerevisiae
ENSJJAG00000015513	Lsg1	100	80.967	ENSSBOG00000034938	LSG1	100	80.967	Saimiri_boliviensis_boliviensis
ENSJJAG00000015513	Lsg1	78	66.286	ENSSHAG00000003487	LSG1	99	66.476	Sarcophilus_harrisii
ENSJJAG00000015513	Lsg1	98	65.501	ENSSFOG00015008955	lsg1	99	65.070	Scleropages_formosus
ENSJJAG00000015513	Lsg1	98	66.404	ENSSDUG00000004622	lsg1	99	66.151	Seriola_dumerili
ENSJJAG00000015513	Lsg1	98	66.613	ENSSLDG00000010869	lsg1	99	66.197	Seriola_lalandi_dorsalis
ENSJJAG00000015513	Lsg1	82	79.592	ENSSARG00000012981	LSG1	81	79.592	Sorex_araneus
ENSJJAG00000015513	Lsg1	99	68.541	ENSSPUG00000016347	LSG1	99	67.879	Sphenodon_punctatus
ENSJJAG00000015513	Lsg1	99	64.531	ENSSPAG00000005508	lsg1	99	64.642	Stegastes_partitus
ENSJJAG00000015513	Lsg1	99	79.358	ENSSSCG00000011827	LSG1	99	78.030	Sus_scrofa
ENSJJAG00000015513	Lsg1	89	62.480	ENSTGUG00000009068	LSG1	99	62.993	Taeniopygia_guttata
ENSJJAG00000015513	Lsg1	97	61.778	ENSTRUG00000017380	lsg1	99	61.927	Takifugu_rubripes
ENSJJAG00000015513	Lsg1	97	63.750	ENSTNIG00000015570	lsg1	99	64.969	Tetraodon_nigroviridis
ENSJJAG00000015513	Lsg1	99	72.672	ENSTTRG00000000559	LSG1	99	71.908	Tursiops_truncatus
ENSJJAG00000015513	Lsg1	99	79.697	ENSUAMG00000012454	LSG1	99	80.000	Ursus_americanus
ENSJJAG00000015513	Lsg1	99	79.697	ENSUMAG00000000855	LSG1	99	80.000	Ursus_maritimus
ENSJJAG00000015513	Lsg1	95	75.439	ENSVPAG00000012400	LSG1	99	75.439	Vicugna_pacos
ENSJJAG00000015513	Lsg1	95	78.880	ENSVVUG00000008956	LSG1	98	78.413	Vulpes_vulpes
ENSJJAG00000015513	Lsg1	99	66.872	ENSXETG00000003451	lsg1	99	67.138	Xenopus_tropicalis
ENSJJAG00000015513	Lsg1	97	65.545	ENSXCOG00000003239	lsg1	99	65.312	Xiphophorus_couchianus
ENSJJAG00000015513	Lsg1	97	65.595	ENSXMAG00000005536	lsg1	99	65.728	Xiphophorus_maculatus