EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000015523 (Gene tree)
Gene ID: 101598979
Gene Symbol: Pdcd11
Alias: 1110021I22Rik|ALG-4
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 48356 bases
Position: chrJH725466.1:25457652-25506007
Accession: 101598979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000012542	Suf	PF05843.14	1.8e-10	1	1
ENSJJAP00000012548	Suf	PF05843.14	1.9e-10	1	1
ENSJJAP00000012542	S1	PF00575.23	3.2e-71	1	5
ENSJJAP00000012542	S1	PF00575.23	3.2e-71	2	5
ENSJJAP00000012542	S1	PF00575.23	3.2e-71	3	5
ENSJJAP00000012542	S1	PF00575.23	3.2e-71	4	5
ENSJJAP00000012542	S1	PF00575.23	3.2e-71	5	5
ENSJJAP00000012548	S1	PF00575.23	5.3e-66	1	5
ENSJJAP00000012548	S1	PF00575.23	5.3e-66	2	5
ENSJJAP00000012548	S1	PF00575.23	5.3e-66	3	5
ENSJJAP00000012548	S1	PF00575.23	5.3e-66	4	5
ENSJJAP00000012548	S1	PF00575.23	5.3e-66	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000019026	-	5610	XM_004659381	ENSJJAP00000012542	1869 (aa)	XP_004659438	UPI000333121E
ENSJJAT00000019032	-	5562	-	ENSJJAP00000012548	1853 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000015523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000015523's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000015523	Pdcd11	100	83.823	ENSG00000148843	PDCD11	100	83.814	Homo_sapiens
ENSJJAG00000015523	Pdcd11	99	44.754	ENSAPOG00000015629	pdcd11	99	44.617	Acanthochromis_polyacanthus
ENSJJAG00000015523	Pdcd11	99	82.713	ENSAMEG00000017935	PDCD11	99	82.810	Ailuropoda_melanoleuca
ENSJJAG00000015523	Pdcd11	50	42.362	ENSACIG00000006458	-	98	42.362	Amphilophus_citrinellus
ENSJJAG00000015523	Pdcd11	99	44.933	ENSAOCG00000015287	pdcd11	99	44.575	Amphiprion_ocellaris
ENSJJAG00000015523	Pdcd11	53	43.058	ENSAPEG00000020240	pdcd11	96	42.728	Amphiprion_percula
ENSJJAG00000015523	Pdcd11	99	45.158	ENSATEG00000021043	pdcd11	99	44.759	Anabas_testudineus
ENSJJAG00000015523	Pdcd11	99	54.536	ENSAPLG00000010301	PDCD11	99	54.589	Anas_platyrhynchos
ENSJJAG00000015523	Pdcd11	99	54.433	ENSACAG00000004796	PDCD11	99	54.756	Anolis_carolinensis
ENSJJAG00000015523	Pdcd11	99	83.298	ENSANAG00000034576	PDCD11	99	83.191	Aotus_nancymaae
ENSJJAG00000015523	Pdcd11	87	65.101	ENSACLG00000018236	pdcd11	99	59.544	Astatotilapia_calliptera
ENSJJAG00000015523	Pdcd11	98	41.967	ENSAMXG00000005458	pdcd11	100	41.806	Astyanax_mexicanus
ENSJJAG00000015523	Pdcd11	100	80.499	ENSBTAG00000009715	PDCD11	100	80.287	Bos_taurus
ENSJJAG00000015523	Pdcd11	99	82.602	ENSCJAG00000018257	PDCD11	99	82.762	Callithrix_jacchus
ENSJJAG00000015523	Pdcd11	99	83.075	ENSCAFG00000010411	PDCD11	100	82.915	Canis_familiaris
ENSJJAG00000015523	Pdcd11	100	82.889	ENSCAFG00020010369	PDCD11	100	82.911	Canis_lupus_dingo
ENSJJAG00000015523	Pdcd11	99	80.501	ENSCHIG00000025218	PDCD11	100	80.234	Capra_hircus
ENSJJAG00000015523	Pdcd11	98	76.261	ENSTSYG00000033423	PDCD11	100	76.063	Carlito_syrichta
ENSJJAG00000015523	Pdcd11	91	73.072	ENSCAPG00000005386	PDCD11	99	72.733	Cavia_aperea
ENSJJAG00000015523	Pdcd11	100	80.929	ENSCPOG00000010957	PDCD11	99	82.423	Cavia_porcellus
ENSJJAG00000015523	Pdcd11	99	83.084	ENSCCAG00000018950	PDCD11	99	82.976	Cebus_capucinus
ENSJJAG00000015523	Pdcd11	100	84.098	ENSCATG00000044331	PDCD11	100	84.098	Cercocebus_atys
ENSJJAG00000015523	Pdcd11	100	82.690	ENSCLAG00000001029	PDCD11	100	82.529	Chinchilla_lanigera
ENSJJAG00000015523	Pdcd11	100	84.295	ENSCSAG00000005346	PDCD11	100	84.188	Chlorocebus_sabaeus
ENSJJAG00000015523	Pdcd11	82	94.574	ENSCHOG00000004796	PDCD11	90	94.574	Choloepus_hoffmanni
ENSJJAG00000015523	Pdcd11	98	57.800	ENSCPBG00000024487	PDCD11	99	66.339	Chrysemys_picta_bellii
ENSJJAG00000015523	Pdcd11	90	44.106	ENSCING00000002715	-	94	44.106	Ciona_intestinalis
ENSJJAG00000015523	Pdcd11	100	84.135	ENSCANG00000043300	PDCD11	100	84.241	Colobus_angolensis_palliatus
ENSJJAG00000015523	Pdcd11	100	82.987	ENSCGRG00001006458	Pdcd11	100	82.667	Cricetulus_griseus_chok1gshd
ENSJJAG00000015523	Pdcd11	100	82.933	ENSCGRG00000003583	Pdcd11	100	82.613	Cricetulus_griseus_crigri
ENSJJAG00000015523	Pdcd11	97	44.200	ENSCSEG00000010739	pdcd11	99	44.145	Cynoglossus_semilaevis
ENSJJAG00000015523	Pdcd11	95	63.450	ENSCVAG00000018903	pdcd11	96	61.111	Cyprinodon_variegatus
ENSJJAG00000015523	Pdcd11	99	43.025	ENSDARG00000052480	pdcd11	99	43.132	Danio_rerio
ENSJJAG00000015523	Pdcd11	100	81.310	ENSDNOG00000013838	PDCD11	100	80.990	Dasypus_novemcinctus
ENSJJAG00000015523	Pdcd11	100	82.464	ENSDORG00000010420	Pdcd11	100	82.688	Dipodomys_ordii
ENSJJAG00000015523	Pdcd11	66	38.608	FBgn0039182	CG5728	74	38.768	Drosophila_melanogaster
ENSJJAG00000015523	Pdcd11	95	71.147	ENSETEG00000000813	PDCD11	100	70.866	Echinops_telfairi
ENSJJAG00000015523	Pdcd11	67	53.082	ENSEBUG00000002358	-	92	54.286	Eptatretus_burgeri
ENSJJAG00000015523	Pdcd11	96	84.319	ENSEASG00005015159	PDCD11	100	84.310	Equus_asinus_asinus
ENSJJAG00000015523	Pdcd11	100	83.840	ENSECAG00000020507	PDCD11	100	83.520	Equus_caballus
ENSJJAG00000015523	Pdcd11	90	83.168	ENSEEUG00000009245	PDCD11	91	83.168	Erinaceus_europaeus
ENSJJAG00000015523	Pdcd11	99	45.425	ENSELUG00000004211	pdcd11	99	45.318	Esox_lucius
ENSJJAG00000015523	Pdcd11	99	83.102	ENSFCAG00000002384	PDCD11	99	83.102	Felis_catus
ENSJJAG00000015523	Pdcd11	99	55.224	ENSFALG00000008775	PDCD11	99	55.204	Ficedula_albicollis
ENSJJAG00000015523	Pdcd11	100	80.957	ENSFDAG00000009532	PDCD11	100	80.479	Fukomys_damarensis
ENSJJAG00000015523	Pdcd11	89	67.230	ENSFHEG00000022997	pdcd11	95	67.986	Fundulus_heteroclitus
ENSJJAG00000015523	Pdcd11	93	44.526	ENSGMOG00000004186	pdcd11	94	44.717	Gadus_morhua
ENSJJAG00000015523	Pdcd11	77	53.766	ENSGALG00000008265	PDCD11	98	54.050	Gallus_gallus
ENSJJAG00000015523	Pdcd11	99	44.094	ENSGAFG00000012806	pdcd11	99	43.803	Gambusia_affinis
ENSJJAG00000015523	Pdcd11	99	44.656	ENSGACG00000018233	pdcd11	95	60.800	Gasterosteus_aculeatus
ENSJJAG00000015523	Pdcd11	95	59.798	ENSGAGG00000024314	PDCD11	99	59.640	Gopherus_agassizii
ENSJJAG00000015523	Pdcd11	100	83.547	ENSGGOG00000011621	PDCD11	100	83.547	Gorilla_gorilla
ENSJJAG00000015523	Pdcd11	99	45.241	ENSHBUG00000020226	pdcd11	99	45.294	Haplochromis_burtoni
ENSJJAG00000015523	Pdcd11	100	81.697	ENSHGLG00000001462	PDCD11	100	81.750	Heterocephalus_glaber_female
ENSJJAG00000015523	Pdcd11	100	81.110	ENSHGLG00100018779	PDCD11	100	81.163	Heterocephalus_glaber_male
ENSJJAG00000015523	Pdcd11	99	43.194	ENSHCOG00000016006	pdcd11	99	43.406	Hippocampus_comes
ENSJJAG00000015523	Pdcd11	63	40.905	ENSIPUG00000015102	pdcd11	99	42.457	Ictalurus_punctatus
ENSJJAG00000015523	Pdcd11	100	83.923	ENSSTOG00000014553	PDCD11	100	83.871	Ictidomys_tridecemlineatus
ENSJJAG00000015523	Pdcd11	50	41.164	ENSKMAG00000021182	pdcd11	98	41.272	Kryptolebias_marmoratus
ENSJJAG00000015523	Pdcd11	99	49.223	ENSLOCG00000011818	pdcd11	99	49.518	Lepisosteus_oculatus
ENSJJAG00000015523	Pdcd11	100	81.344	ENSLAFG00000008398	PDCD11	100	81.237	Loxodonta_africana
ENSJJAG00000015523	Pdcd11	100	84.241	ENSMFAG00000044058	PDCD11	100	84.295	Macaca_fascicularis
ENSJJAG00000015523	Pdcd11	100	84.241	ENSMMUG00000007058	PDCD11	100	84.295	Macaca_mulatta
ENSJJAG00000015523	Pdcd11	100	84.402	ENSMNEG00000040726	PDCD11	99	84.295	Macaca_nemestrina
ENSJJAG00000015523	Pdcd11	100	83.226	ENSMLEG00000040978	PDCD11	100	82.906	Mandrillus_leucophaeus
ENSJJAG00000015523	Pdcd11	99	44.581	ENSMAMG00000009572	pdcd11	99	44.474	Mastacembelus_armatus
ENSJJAG00000015523	Pdcd11	99	45.134	ENSMZEG00005008949	pdcd11	99	45.187	Maylandia_zebra
ENSJJAG00000015523	Pdcd11	99	55.885	ENSMGAG00000010482	PDCD11	99	55.690	Meleagris_gallopavo
ENSJJAG00000015523	Pdcd11	94	83.965	ENSMAUG00000014924	Pdcd11	97	83.965	Mesocricetus_auratus
ENSJJAG00000015523	Pdcd11	100	83.547	ENSMICG00000012421	PDCD11	100	82.968	Microcebus_murinus
ENSJJAG00000015523	Pdcd11	100	82.525	ENSMOCG00000021792	Pdcd11	100	82.312	Microtus_ochrogaster
ENSJJAG00000015523	Pdcd11	99	40.424	ENSMMOG00000007572	pdcd11	99	40.287	Mola_mola
ENSJJAG00000015523	Pdcd11	99	62.407	ENSMODG00000011077	PDCD11	99	62.527	Monodelphis_domestica
ENSJJAG00000015523	Pdcd11	94	46.680	ENSMALG00000003859	pdcd11	98	44.742	Monopterus_albus
ENSJJAG00000015523	Pdcd11	100	80.815	MGP_CAROLIEiJ_G0023050	Pdcd11	100	80.600	Mus_caroli
ENSJJAG00000015523	Pdcd11	100	80.942	ENSMUSG00000025047	Pdcd11	100	80.942	Mus_musculus
ENSJJAG00000015523	Pdcd11	100	81.383	MGP_PahariEiJ_G0014540	Pdcd11	100	81.277	Mus_pahari
ENSJJAG00000015523	Pdcd11	100	81.029	MGP_SPRETEiJ_G0023971	Pdcd11	100	81.029	Mus_spretus
ENSJJAG00000015523	Pdcd11	99	82.381	ENSMPUG00000016829	PDCD11	100	82.648	Mustela_putorius_furo
ENSJJAG00000015523	Pdcd11	100	83.449	ENSMLUG00000004997	PDCD11	100	83.449	Myotis_lucifugus
ENSJJAG00000015523	Pdcd11	100	86.172	ENSNGAG00000018143	Pdcd11	100	85.958	Nannospalax_galili
ENSJJAG00000015523	Pdcd11	85	55.490	ENSNBRG00000021596	pdcd11	97	52.877	Neolamprologus_brichardi
ENSJJAG00000015523	Pdcd11	100	80.876	ENSNLEG00000026700	PDCD11	100	80.769	Nomascus_leucogenys
ENSJJAG00000015523	Pdcd11	71	80.349	ENSMEUG00000013719	-	71	80.349	Notamacropus_eugenii
ENSJJAG00000015523	Pdcd11	100	80.339	ENSOPRG00000010593	PDCD11	100	77.837	Ochotona_princeps
ENSJJAG00000015523	Pdcd11	100	79.638	ENSODEG00000008079	PDCD11	99	79.301	Octodon_degus
ENSJJAG00000015523	Pdcd11	99	45.455	ENSONIG00000018835	pdcd11	99	45.566	Oreochromis_niloticus
ENSJJAG00000015523	Pdcd11	99	58.994	ENSOANG00000001636	-	99	58.994	Ornithorhynchus_anatinus
ENSJJAG00000015523	Pdcd11	100	82.632	ENSOCUG00000006312	PDCD11	100	82.419	Oryctolagus_cuniculus
ENSJJAG00000015523	Pdcd11	99	43.985	ENSORLG00020003642	pdcd11	99	44.176	Oryzias_latipes_hni
ENSJJAG00000015523	Pdcd11	99	43.938	ENSORLG00015001618	pdcd11	99	44.189	Oryzias_latipes_hsok
ENSJJAG00000015523	Pdcd11	73	45.209	ENSOMEG00000010904	pdcd11	98	44.861	Oryzias_melastigma
ENSJJAG00000015523	Pdcd11	100	82.444	ENSOGAG00000008683	PDCD11	100	82.231	Otolemur_garnettii
ENSJJAG00000015523	Pdcd11	99	80.181	ENSOARG00000003719	PDCD11	100	79.915	Ovis_aries
ENSJJAG00000015523	Pdcd11	100	84.146	ENSPPAG00000024593	PDCD11	100	84.146	Pan_paniscus
ENSJJAG00000015523	Pdcd11	99	83.262	ENSPPRG00000015133	PDCD11	99	83.262	Panthera_pardus
ENSJJAG00000015523	Pdcd11	99	83.262	ENSPTIG00000011433	PDCD11	99	83.262	Panthera_tigris_altaica
ENSJJAG00000015523	Pdcd11	100	83.707	ENSPTRG00000002911	PDCD11	100	83.707	Pan_troglodytes
ENSJJAG00000015523	Pdcd11	100	84.188	ENSPANG00000020959	PDCD11	100	84.188	Papio_anubis
ENSJJAG00000015523	Pdcd11	99	46.303	ENSPKIG00000000973	pdcd11	99	45.856	Paramormyrops_kingsleyae
ENSJJAG00000015523	Pdcd11	78	57.390	ENSPSIG00000005102	PDCD11	93	58.069	Pelodiscus_sinensis
ENSJJAG00000015523	Pdcd11	82	41.943	ENSPMGG00000007289	pdcd11	81	65.357	Periophthalmus_magnuspinnatus
ENSJJAG00000015523	Pdcd11	100	82.657	ENSPEMG00000010315	Pdcd11	100	82.764	Peromyscus_maniculatus_bairdii
ENSJJAG00000015523	Pdcd11	99	42.479	ENSPMAG00000003098	pdcd11	99	42.281	Petromyzon_marinus
ENSJJAG00000015523	Pdcd11	100	66.086	ENSPCIG00000001118	PDCD11	100	66.102	Phascolarctos_cinereus
ENSJJAG00000015523	Pdcd11	99	44.992	ENSPFOG00000006012	pdcd11	99	44.480	Poecilia_formosa
ENSJJAG00000015523	Pdcd11	99	42.523	ENSPLAG00000014494	pdcd11	99	42.485	Poecilia_latipinna
ENSJJAG00000015523	Pdcd11	94	55.741	ENSPMEG00000018177	pdcd11	98	53.846	Poecilia_mexicana
ENSJJAG00000015523	Pdcd11	99	44.789	ENSPREG00000000475	pdcd11	99	44.456	Poecilia_reticulata
ENSJJAG00000015523	Pdcd11	100	83.249	ENSPPYG00000002621	PDCD11	100	83.106	Pongo_abelii
ENSJJAG00000015523	Pdcd11	87	82.659	ENSPCAG00000011663	PDCD11	66	82.659	Procavia_capensis
ENSJJAG00000015523	Pdcd11	100	73.498	ENSPCOG00000023327	PDCD11	100	73.498	Propithecus_coquereli
ENSJJAG00000015523	Pdcd11	100	81.620	ENSPVAG00000004176	PDCD11	100	81.620	Pteropus_vampyrus
ENSJJAG00000015523	Pdcd11	99	45.294	ENSPNYG00000003979	pdcd11	99	45.348	Pundamilia_nyererei
ENSJJAG00000015523	Pdcd11	95	45.490	ENSPNAG00000017225	pdcd11	99	45.302	Pygocentrus_nattereri
ENSJJAG00000015523	Pdcd11	100	80.714	ENSRNOG00000020304	Pdcd11	99	80.490	Rattus_norvegicus
ENSJJAG00000015523	Pdcd11	100	84.135	ENSRBIG00000011889	PDCD11	100	84.241	Rhinopithecus_bieti
ENSJJAG00000015523	Pdcd11	100	84.188	ENSRROG00000030483	PDCD11	100	84.295	Rhinopithecus_roxellana
ENSJJAG00000015523	Pdcd11	85	48.327	YMR229C	-	98	42.183	Saccharomyces_cerevisiae
ENSJJAG00000015523	Pdcd11	99	79.924	ENSSBOG00000030308	PDCD11	99	79.924	Saimiri_boliviensis_boliviensis
ENSJJAG00000015523	Pdcd11	99	65.035	ENSSHAG00000018258	PDCD11	99	65.035	Sarcophilus_harrisii
ENSJJAG00000015523	Pdcd11	99	46.771	ENSSFOG00015003881	pdcd11	99	46.373	Scleropages_formosus
ENSJJAG00000015523	Pdcd11	99	45.396	ENSSMAG00000006612	pdcd11	99	44.861	Scophthalmus_maximus
ENSJJAG00000015523	Pdcd11	95	49.846	ENSSDUG00000021302	pdcd11	99	50.153	Seriola_dumerili
ENSJJAG00000015523	Pdcd11	80	91.071	ENSSARG00000002540	PDCD11	74	91.071	Sorex_araneus
ENSJJAG00000015523	Pdcd11	97	43.416	ENSSPAG00000017558	pdcd11	100	43.022	Stegastes_partitus
ENSJJAG00000015523	Pdcd11	100	81.842	ENSSSCG00000010599	PDCD11	100	82.051	Sus_scrofa
ENSJJAG00000015523	Pdcd11	70	41.463	ENSTRUG00000014291	pdcd11	99	41.369	Takifugu_rubripes
ENSJJAG00000015523	Pdcd11	99	44.124	ENSTNIG00000012085	pdcd11	99	43.733	Tetraodon_nigroviridis
ENSJJAG00000015523	Pdcd11	100	78.263	ENSTBEG00000001893	PDCD11	100	78.050	Tupaia_belangeri
ENSJJAG00000015523	Pdcd11	99	77.701	ENSTTRG00000003356	PDCD11	99	77.754	Tursiops_truncatus
ENSJJAG00000015523	Pdcd11	99	82.961	ENSUAMG00000018015	PDCD11	100	82.907	Ursus_americanus
ENSJJAG00000015523	Pdcd11	100	81.360	ENSUMAG00000023567	PDCD11	100	81.306	Ursus_maritimus
ENSJJAG00000015523	Pdcd11	76	78.519	ENSVPAG00000007405	PDCD11	83	78.519	Vicugna_pacos
ENSJJAG00000015523	Pdcd11	99	83.182	ENSVVUG00000004457	PDCD11	100	82.968	Vulpes_vulpes
ENSJJAG00000015523	Pdcd11	99	48.842	ENSXETG00000009482	pdcd11	99	49.100	Xenopus_tropicalis
ENSJJAG00000015523	Pdcd11	99	39.247	ENSXCOG00000012420	pdcd11	99	39.247	Xiphophorus_couchianus
ENSJJAG00000015523	Pdcd11	99	45.303	ENSXMAG00000004638	pdcd11	99	44.879	Xiphophorus_maculatus