EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000015696 (Gene tree)
Gene ID: 101613977
Gene Symbol: Rpusd1
Alias: 2310051D06Rik
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 3541 bases
Position: chrJH725443.1:1127834-1131374
Accession: 101613977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000012748	PseudoU_synth_2	PF00849.22	2.1e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000019232	-	915	XM_004652134	ENSJJAP00000012748	304 (aa)	XP_004652191	UPI000332F35E

Gene Model

Click here to download ENSJJAG00000015696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000015696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000015696	Rpusd1	100	83.013	ENSG00000007376	RPUSD1	100	89.881	Homo_sapiens
ENSJJAG00000015696	Rpusd1	98	56.623	ENSAPOG00000022221	rpusd1	98	56.623	Acanthochromis_polyacanthus
ENSJJAG00000015696	Rpusd1	100	83.553	ENSAMEG00000007461	RPUSD1	100	83.224	Ailuropoda_melanoleuca
ENSJJAG00000015696	Rpusd1	98	57.516	ENSACIG00000015863	rpusd1	98	56.863	Amphilophus_citrinellus
ENSJJAG00000015696	Rpusd1	98	56.721	ENSAOCG00000021975	rpusd1	95	56.721	Amphiprion_ocellaris
ENSJJAG00000015696	Rpusd1	98	56.393	ENSAPEG00000001316	rpusd1	95	56.393	Amphiprion_percula
ENSJJAG00000015696	Rpusd1	79	66.527	ENSATEG00000002984	rpusd1	98	57.705	Anabas_testudineus
ENSJJAG00000015696	Rpusd1	78	58.537	ENSAPLG00000012316	RPUSD1	99	58.025	Anas_platyrhynchos
ENSJJAG00000015696	Rpusd1	99	67.219	ENSACAG00000008953	RPUSD1	100	67.219	Anolis_carolinensis
ENSJJAG00000015696	Rpusd1	100	80.938	ENSANAG00000024709	RPUSD1	100	84.936	Aotus_nancymaae
ENSJJAG00000015696	Rpusd1	98	58.306	ENSACLG00000013692	rpusd1	98	58.958	Astatotilapia_calliptera
ENSJJAG00000015696	Rpusd1	99	59.136	ENSAMXG00000019802	rpusd1	100	59.136	Astyanax_mexicanus
ENSJJAG00000015696	Rpusd1	100	85.390	ENSBTAG00000000179	RPUSD1	100	86.688	Bos_taurus
ENSJJAG00000015696	Rpusd1	100	83.974	ENSCJAG00000012253	RPUSD1	100	84.615	Callithrix_jacchus
ENSJJAG00000015696	Rpusd1	100	83.660	ENSCAFG00000019614	RPUSD1	100	83.987	Canis_familiaris
ENSJJAG00000015696	Rpusd1	100	83.660	ENSCAFG00020008891	RPUSD1	100	83.987	Canis_lupus_dingo
ENSJJAG00000015696	Rpusd1	100	85.390	ENSCHIG00000012872	RPUSD1	100	86.688	Capra_hircus
ENSJJAG00000015696	Rpusd1	100	84.194	ENSTSYG00000036934	RPUSD1	100	84.466	Carlito_syrichta
ENSJJAG00000015696	Rpusd1	100	88.562	ENSCAPG00000014219	RPUSD1	100	88.562	Cavia_aperea
ENSJJAG00000015696	Rpusd1	100	88.562	ENSCPOG00000034604	RPUSD1	100	88.562	Cavia_porcellus
ENSJJAG00000015696	Rpusd1	100	80.938	ENSCCAG00000034385	RPUSD1	100	84.936	Cebus_capucinus
ENSJJAG00000015696	Rpusd1	100	84.615	ENSCATG00000042983	RPUSD1	100	85.256	Cercocebus_atys
ENSJJAG00000015696	Rpusd1	100	88.235	ENSCLAG00000013966	RPUSD1	100	88.235	Chinchilla_lanigera
ENSJJAG00000015696	Rpusd1	100	84.615	ENSCSAG00000012121	RPUSD1	100	84.295	Chlorocebus_sabaeus
ENSJJAG00000015696	Rpusd1	99	65.461	ENSCPBG00000021101	RPUSD1	99	65.132	Chrysemys_picta_bellii
ENSJJAG00000015696	Rpusd1	92	87.900	ENSCANG00000028576	RPUSD1	97	88.278	Colobus_angolensis_palliatus
ENSJJAG00000015696	Rpusd1	100	89.869	ENSCGRG00001014253	Rpusd1	100	89.869	Cricetulus_griseus_chok1gshd
ENSJJAG00000015696	Rpusd1	100	89.869	ENSCGRG00000017995	Rpusd1	100	89.869	Cricetulus_griseus_crigri
ENSJJAG00000015696	Rpusd1	99	56.250	ENSCSEG00000018512	rpusd1	100	56.250	Cynoglossus_semilaevis
ENSJJAG00000015696	Rpusd1	98	57.000	ENSCVAG00000022746	rpusd1	98	57.000	Cyprinodon_variegatus
ENSJJAG00000015696	Rpusd1	99	61.462	ENSDARG00000060192	rpusd1	100	61.462	Danio_rerio
ENSJJAG00000015696	Rpusd1	100	83.226	ENSDNOG00000003721	RPUSD1	100	82.903	Dasypus_novemcinctus
ENSJJAG00000015696	Rpusd1	100	89.869	ENSDORG00000026656	Rpusd1	100	90.132	Dipodomys_ordii
ENSJJAG00000015696	Rpusd1	99	45.886	ENSEBUG00000008767	rpusd1	94	45.886	Eptatretus_burgeri
ENSJJAG00000015696	Rpusd1	100	83.544	ENSEASG00005018421	RPUSD1	76	83.861	Equus_asinus_asinus
ENSJJAG00000015696	Rpusd1	84	60.236	ENSELUG00000014307	rpusd1	88	53.770	Esox_lucius
ENSJJAG00000015696	Rpusd1	100	83.007	ENSFCAG00000010359	RPUSD1	100	83.007	Felis_catus
ENSJJAG00000015696	Rpusd1	99	66.230	ENSFALG00000003211	RPUSD1	100	66.007	Ficedula_albicollis
ENSJJAG00000015696	Rpusd1	100	88.562	ENSFDAG00000013398	RPUSD1	100	88.562	Fukomys_damarensis
ENSJJAG00000015696	Rpusd1	98	55.776	ENSFHEG00000004736	rpusd1	98	57.096	Fundulus_heteroclitus
ENSJJAG00000015696	Rpusd1	83	63.241	ENSGMOG00000010756	rpusd1	99	55.375	Gadus_morhua
ENSJJAG00000015696	Rpusd1	99	64.286	ENSGALG00000005315	RPUSD1	100	64.262	Gallus_gallus
ENSJJAG00000015696	Rpusd1	98	58.140	ENSGAFG00000009886	rpusd1	98	57.807	Gambusia_affinis
ENSJJAG00000015696	Rpusd1	83	64.542	ENSGACG00000014276	rpusd1	97	57.756	Gasterosteus_aculeatus
ENSJJAG00000015696	Rpusd1	99	65.902	ENSGAGG00000004181	RPUSD1	99	65.132	Gopherus_agassizii
ENSJJAG00000015696	Rpusd1	100	82.692	ENSGGOG00000013997	RPUSD1	100	83.333	Gorilla_gorilla
ENSJJAG00000015696	Rpusd1	98	57.980	ENSHBUG00000023728	rpusd1	98	58.632	Haplochromis_burtoni
ENSJJAG00000015696	Rpusd1	100	87.908	ENSHGLG00000002595	RPUSD1	100	87.908	Heterocephalus_glaber_female
ENSJJAG00000015696	Rpusd1	100	87.908	ENSHGLG00100014303	RPUSD1	100	87.908	Heterocephalus_glaber_male
ENSJJAG00000015696	Rpusd1	98	57.895	ENSHCOG00000002390	rpusd1	99	57.525	Hippocampus_comes
ENSJJAG00000015696	Rpusd1	99	60.726	ENSIPUG00000001570	rpusd1	99	60.726	Ictalurus_punctatus
ENSJJAG00000015696	Rpusd1	100	89.542	ENSSTOG00000004276	RPUSD1	100	89.542	Ictidomys_tridecemlineatus
ENSJJAG00000015696	Rpusd1	98	56.333	ENSKMAG00000017287	rpusd1	98	56.333	Kryptolebias_marmoratus
ENSJJAG00000015696	Rpusd1	98	57.049	ENSLBEG00000022502	rpusd1	98	57.705	Labrus_bergylta
ENSJJAG00000015696	Rpusd1	98	57.049	ENSLBEG00000013354	RPUSD1	98	57.705	Labrus_bergylta
ENSJJAG00000015696	Rpusd1	99	61.921	ENSLACG00000008869	RPUSD1	99	61.921	Latimeria_chalumnae
ENSJJAG00000015696	Rpusd1	71	74.074	ENSLOCG00000005682	rpusd1	99	74.074	Lepisosteus_oculatus
ENSJJAG00000015696	Rpusd1	100	82.680	ENSLAFG00000002115	RPUSD1	100	82.680	Loxodonta_africana
ENSJJAG00000015696	Rpusd1	100	84.936	ENSMFAG00000003961	RPUSD1	100	85.577	Macaca_fascicularis
ENSJJAG00000015696	Rpusd1	100	84.936	ENSMMUG00000000842	RPUSD1	100	85.577	Macaca_mulatta
ENSJJAG00000015696	Rpusd1	100	84.936	ENSMNEG00000042712	RPUSD1	100	85.577	Macaca_nemestrina
ENSJJAG00000015696	Rpusd1	100	84.936	ENSMLEG00000030591	RPUSD1	100	85.577	Mandrillus_leucophaeus
ENSJJAG00000015696	Rpusd1	83	64.427	ENSMAMG00000004735	rpusd1	98	57.516	Mastacembelus_armatus
ENSJJAG00000015696	Rpusd1	98	58.306	ENSMZEG00005003214	rpusd1	98	58.958	Maylandia_zebra
ENSJJAG00000015696	Rpusd1	97	63.696	ENSMGAG00000005447	RPUSD1	100	63.455	Meleagris_gallopavo
ENSJJAG00000015696	Rpusd1	86	82.642	ENSMAUG00000019998	Rpusd1	99	82.642	Mesocricetus_auratus
ENSJJAG00000015696	Rpusd1	100	86.218	ENSMICG00000017561	RPUSD1	100	84.076	Microcebus_murinus
ENSJJAG00000015696	Rpusd1	100	91.503	ENSMOCG00000014082	Rpusd1	100	91.176	Microtus_ochrogaster
ENSJJAG00000015696	Rpusd1	81	64.898	ENSMMOG00000012569	rpusd1	99	57.383	Mola_mola
ENSJJAG00000015696	Rpusd1	100	69.182	ENSMODG00000016882	RPUSD1	100	69.032	Monodelphis_domestica
ENSJJAG00000015696	Rpusd1	98	58.170	ENSMALG00000017818	rpusd1	98	58.170	Monopterus_albus
ENSJJAG00000015696	Rpusd1	100	91.503	MGP_CAROLIEiJ_G0021244	Rpusd1	100	91.503	Mus_caroli
ENSJJAG00000015696	Rpusd1	100	91.830	ENSMUSG00000041199	Rpusd1	100	91.830	Mus_musculus
ENSJJAG00000015696	Rpusd1	100	89.935	MGP_PahariEiJ_G0023562	Rpusd1	100	89.935	Mus_pahari
ENSJJAG00000015696	Rpusd1	100	91.830	MGP_SPRETEiJ_G0022155	Rpusd1	100	91.830	Mus_spretus
ENSJJAG00000015696	Rpusd1	100	84.262	ENSMPUG00000015897	RPUSD1	100	84.641	Mustela_putorius_furo
ENSJJAG00000015696	Rpusd1	100	86.174	ENSMLUG00000001089	RPUSD1	100	87.138	Myotis_lucifugus
ENSJJAG00000015696	Rpusd1	100	91.503	ENSNGAG00000003595	Rpusd1	100	91.503	Nannospalax_galili
ENSJJAG00000015696	Rpusd1	98	58.140	ENSNBRG00000006457	rpusd1	98	58.140	Neolamprologus_brichardi
ENSJJAG00000015696	Rpusd1	55	78.286	ENSNLEG00000008424	-	100	77.714	Nomascus_leucogenys
ENSJJAG00000015696	Rpusd1	100	69.579	ENSMEUG00000016049	RPUSD1	100	69.079	Notamacropus_eugenii
ENSJJAG00000015696	Rpusd1	99	79.470	ENSOPRG00000008340	RPUSD1	99	78.477	Ochotona_princeps
ENSJJAG00000015696	Rpusd1	100	86.928	ENSODEG00000016945	RPUSD1	100	86.928	Octodon_degus
ENSJJAG00000015696	Rpusd1	98	57.003	ENSONIG00000015672	rpusd1	99	57.655	Oreochromis_niloticus
ENSJJAG00000015696	Rpusd1	99	57.947	ENSORLG00000013009	rpusd1	99	57.947	Oryzias_latipes
ENSJJAG00000015696	Rpusd1	99	57.616	ENSORLG00020010382	rpusd1	99	57.616	Oryzias_latipes_hni
ENSJJAG00000015696	Rpusd1	99	56.954	ENSORLG00015021354	rpusd1	99	56.954	Oryzias_latipes_hsok
ENSJJAG00000015696	Rpusd1	98	57.576	ENSOMEG00000021426	rpusd1	98	57.576	Oryzias_melastigma
ENSJJAG00000015696	Rpusd1	100	88.782	ENSOGAG00000003795	RPUSD1	100	88.141	Otolemur_garnettii
ENSJJAG00000015696	Rpusd1	100	85.065	ENSOARG00000014254	RPUSD1	100	86.364	Ovis_aries
ENSJJAG00000015696	Rpusd1	100	82.692	ENSPPAG00000034797	RPUSD1	100	83.333	Pan_paniscus
ENSJJAG00000015696	Rpusd1	100	82.680	ENSPPRG00000012389	RPUSD1	100	82.201	Panthera_pardus
ENSJJAG00000015696	Rpusd1	100	82.353	ENSPTIG00000008545	RPUSD1	92	81.877	Panthera_tigris_altaica
ENSJJAG00000015696	Rpusd1	100	82.692	ENSPTRG00000007565	RPUSD1	100	83.333	Pan_troglodytes
ENSJJAG00000015696	Rpusd1	100	84.295	ENSPANG00000024401	RPUSD1	100	84.936	Papio_anubis
ENSJJAG00000015696	Rpusd1	99	60.645	ENSPKIG00000018890	rpusd1	91	60.855	Paramormyrops_kingsleyae
ENSJJAG00000015696	Rpusd1	99	66.993	ENSPSIG00000013945	RPUSD1	100	66.885	Pelodiscus_sinensis
ENSJJAG00000015696	Rpusd1	98	57.426	ENSPMGG00000014950	rpusd1	99	56.436	Periophthalmus_magnuspinnatus
ENSJJAG00000015696	Rpusd1	100	91.176	ENSPEMG00000000497	Rpusd1	100	91.176	Peromyscus_maniculatus_bairdii
ENSJJAG00000015696	Rpusd1	84	57.588	ENSPMAG00000001563	rpusd1	84	57.588	Petromyzon_marinus
ENSJJAG00000015696	Rpusd1	100	69.132	ENSPCIG00000021216	-	94	69.508	Phascolarctos_cinereus
ENSJJAG00000015696	Rpusd1	98	58.416	ENSPFOG00000007946	rpusd1	98	58.333	Poecilia_formosa
ENSJJAG00000015696	Rpusd1	98	58.416	ENSPLAG00000011925	rpusd1	98	58.333	Poecilia_latipinna
ENSJJAG00000015696	Rpusd1	98	58.086	ENSPMEG00000002910	rpusd1	98	58.000	Poecilia_mexicana
ENSJJAG00000015696	Rpusd1	98	58.804	ENSPREG00000019851	rpusd1	98	58.472	Poecilia_reticulata
ENSJJAG00000015696	Rpusd1	100	67.320	ENSPCAG00000002258	RPUSD1	100	67.320	Procavia_capensis
ENSJJAG00000015696	Rpusd1	100	87.500	ENSPCOG00000022582	RPUSD1	100	87.500	Propithecus_coquereli
ENSJJAG00000015696	Rpusd1	100	82.051	ENSPVAG00000013104	RPUSD1	100	82.692	Pteropus_vampyrus
ENSJJAG00000015696	Rpusd1	98	58.586	ENSPNYG00000024076	rpusd1	98	58.632	Pundamilia_nyererei
ENSJJAG00000015696	Rpusd1	99	57.947	ENSPNAG00000013806	rpusd1	100	57.947	Pygocentrus_nattereri
ENSJJAG00000015696	Rpusd1	100	91.176	ENSRNOG00000023639	Rpusd1	100	91.176	Rattus_norvegicus
ENSJJAG00000015696	Rpusd1	100	84.295	ENSRBIG00000030238	RPUSD1	100	84.936	Rhinopithecus_bieti
ENSJJAG00000015696	Rpusd1	100	84.295	ENSRROG00000036663	RPUSD1	100	84.936	Rhinopithecus_roxellana
ENSJJAG00000015696	Rpusd1	100	84.539	ENSSBOG00000033063	RPUSD1	100	83.819	Saimiri_boliviensis_boliviensis
ENSJJAG00000015696	Rpusd1	100	68.489	ENSSHAG00000013500	RPUSD1	100	68.525	Sarcophilus_harrisii
ENSJJAG00000015696	Rpusd1	99	61.462	ENSSFOG00015014394	rpusd1	99	61.462	Scleropages_formosus
ENSJJAG00000015696	Rpusd1	98	57.377	ENSSMAG00000008045	rpusd1	91	57.377	Scophthalmus_maximus
ENSJJAG00000015696	Rpusd1	83	67.589	ENSSDUG00000001829	rpusd1	95	60.328	Seriola_dumerili
ENSJJAG00000015696	Rpusd1	83	67.589	ENSSLDG00000020853	rpusd1	95	60.328	Seriola_lalandi_dorsalis
ENSJJAG00000015696	Rpusd1	55	88.024	ENSSARG00000011187	-	100	88.024	Sorex_araneus
ENSJJAG00000015696	Rpusd1	63	56.250	ENSSPUG00000005119	-	100	55.729	Sphenodon_punctatus
ENSJJAG00000015696	Rpusd1	98	58.689	ENSSPAG00000012708	rpusd1	98	58.689	Stegastes_partitus
ENSJJAG00000015696	Rpusd1	100	84.615	ENSSSCG00000008000	RPUSD1	98	89.370	Sus_scrofa
ENSJJAG00000015696	Rpusd1	84	72.941	ENSTGUG00000015375	RPUSD1	100	72.941	Taeniopygia_guttata
ENSJJAG00000015696	Rpusd1	98	55.882	ENSTRUG00000003041	rpusd1	98	55.882	Takifugu_rubripes
ENSJJAG00000015696	Rpusd1	98	54.362	ENSTNIG00000002660	rpusd1	99	54.362	Tetraodon_nigroviridis
ENSJJAG00000015696	Rpusd1	100	86.218	ENSTTRG00000010167	RPUSD1	100	85.256	Tursiops_truncatus
ENSJJAG00000015696	Rpusd1	100	83.333	ENSUAMG00000012736	RPUSD1	100	83.660	Ursus_americanus
ENSJJAG00000015696	Rpusd1	100	83.333	ENSUMAG00000021174	RPUSD1	100	83.660	Ursus_maritimus
ENSJJAG00000015696	Rpusd1	100	83.607	ENSVVUG00000012357	RPUSD1	100	83.333	Vulpes_vulpes
ENSJJAG00000015696	Rpusd1	100	61.842	ENSXETG00000007184	rpusd1	100	61.842	Xenopus_tropicalis
ENSJJAG00000015696	Rpusd1	98	57.475	ENSXCOG00000017930	rpusd1	98	57.475	Xiphophorus_couchianus
ENSJJAG00000015696	Rpusd1	98	57.807	ENSXMAG00000024084	rpusd1	98	57.475	Xiphophorus_maculatus