EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000015779 (Gene tree)
Gene ID: 101604215
Gene Symbol: Tnrc6b
Alias: 2700090M07Rik|A730065C02Rik|D230019K20Rik
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 206066 bases
Position: chrJH725438.1:65680792-65886857
Accession: 101604215
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000012873	Ago_hook	PF10427.9	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000019357	-	5418	XM_012948743	ENSJJAP00000012873	1805 (aa)	XP_012804197	-

Gene Model

Click here to download ENSJJAG00000015779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000015779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000015779	Tnrc6b	96	34.236	ENSJJAG00000017055	Tnrc6c	98	35.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000015779	Tnrc6b	97	92.251	ENSG00000100354	TNRC6B	100	97.297	Homo_sapiens
ENSJJAG00000015779	Tnrc6b	99	90.703	ENSAMEG00000011025	TNRC6B	100	90.340	Ailuropoda_melanoleuca
ENSJJAG00000015779	Tnrc6b	96	84.180	ENSAPLG00000009347	TNRC6B	100	84.066	Anas_platyrhynchos
ENSJJAG00000015779	Tnrc6b	97	72.932	ENSACAG00000007281	TNRC6B	99	73.270	Anolis_carolinensis
ENSJJAG00000015779	Tnrc6b	97	94.018	ENSANAG00000035042	TNRC6B	100	95.868	Aotus_nancymaae
ENSJJAG00000015779	Tnrc6b	51	47.913	ENSAMXG00000008707	tnrc6b	91	44.885	Astyanax_mexicanus
ENSJJAG00000015779	Tnrc6b	98	94.323	ENSBTAG00000021076	TNRC6B	99	94.178	Bos_taurus
ENSJJAG00000015779	Tnrc6b	96	95.175	ENSCJAG00000002732	TNRC6B	99	98.028	Callithrix_jacchus
ENSJJAG00000015779	Tnrc6b	96	95.543	ENSCAFG00000001255	TNRC6B	99	92.482	Canis_familiaris
ENSJJAG00000015779	Tnrc6b	99	95.161	ENSCAFG00020002189	TNRC6B	99	95.259	Canis_lupus_dingo
ENSJJAG00000015779	Tnrc6b	99	94.091	ENSCHIG00000003491	TNRC6B	100	94.259	Capra_hircus
ENSJJAG00000015779	Tnrc6b	97	93.874	ENSTSYG00000011836	TNRC6B	100	95.041	Carlito_syrichta
ENSJJAG00000015779	Tnrc6b	100	95.094	ENSCPOG00000005705	TNRC6B	100	95.314	Cavia_porcellus
ENSJJAG00000015779	Tnrc6b	96	94.209	ENSCCAG00000019912	TNRC6B	100	93.034	Cebus_capucinus
ENSJJAG00000015779	Tnrc6b	96	95.293	ENSCATG00000029291	TNRC6B	100	94.575	Cercocebus_atys
ENSJJAG00000015779	Tnrc6b	100	94.923	ENSCLAG00000016942	TNRC6B	100	95.033	Chinchilla_lanigera
ENSJJAG00000015779	Tnrc6b	97	91.464	ENSCSAG00000006021	TNRC6B	99	91.238	Chlorocebus_sabaeus
ENSJJAG00000015779	Tnrc6b	89	84.836	ENSCPBG00000022932	TNRC6B	99	84.597	Chrysemys_picta_bellii
ENSJJAG00000015779	Tnrc6b	96	95.178	ENSCANG00000030776	TNRC6B	100	95.401	Colobus_angolensis_palliatus
ENSJJAG00000015779	Tnrc6b	96	95.642	ENSCGRG00001020166	Tnrc6b	99	95.757	Cricetulus_griseus_chok1gshd
ENSJJAG00000015779	Tnrc6b	100	95.638	ENSCGRG00000016696	Tnrc6b	99	95.805	Cricetulus_griseus_crigri
ENSJJAG00000015779	Tnrc6b	100	93.726	ENSDNOG00000012744	TNRC6B	100	93.816	Dasypus_novemcinctus
ENSJJAG00000015779	Tnrc6b	100	95.859	ENSDORG00000003386	Tnrc6b	100	95.859	Dipodomys_ordii
ENSJJAG00000015779	Tnrc6b	97	83.597	ENSETEG00000006570	TNRC6B	99	83.824	Echinops_telfairi
ENSJJAG00000015779	Tnrc6b	99	95.752	ENSEASG00005005306	TNRC6B	99	95.647	Equus_asinus_asinus
ENSJJAG00000015779	Tnrc6b	100	95.923	ENSECAG00000009759	TNRC6B	99	97.000	Equus_caballus
ENSJJAG00000015779	Tnrc6b	56	95.604	ENSEEUG00000008690	-	59	95.604	Erinaceus_europaeus
ENSJJAG00000015779	Tnrc6b	100	95.382	ENSFCAG00000004791	TNRC6B	100	95.272	Felis_catus
ENSJJAG00000015779	Tnrc6b	93	87.139	ENSFALG00000012195	TNRC6B	100	87.080	Ficedula_albicollis
ENSJJAG00000015779	Tnrc6b	100	95.306	ENSFDAG00000021368	TNRC6B	100	95.417	Fukomys_damarensis
ENSJJAG00000015779	Tnrc6b	97	87.733	ENSGALG00000012050	TNRC6B	97	87.507	Gallus_gallus
ENSJJAG00000015779	Tnrc6b	97	86.922	ENSGAGG00000025188	TNRC6B	98	86.922	Gopherus_agassizii
ENSJJAG00000015779	Tnrc6b	97	94.761	ENSGGOG00000008444	TNRC6B	100	95.986	Gorilla_gorilla
ENSJJAG00000015779	Tnrc6b	100	95.262	ENSHGLG00000009306	TNRC6B	100	95.207	Heterocephalus_glaber_female
ENSJJAG00000015779	Tnrc6b	100	95.193	ENSHGLG00100018108	TNRC6B	100	95.138	Heterocephalus_glaber_male
ENSJJAG00000015779	Tnrc6b	80	44.231	ENSIPUG00000001515	tnrc6b	95	45.725	Ictalurus_punctatus
ENSJJAG00000015779	Tnrc6b	100	95.914	ENSSTOG00000008927	TNRC6B	100	95.914	Ictidomys_tridecemlineatus
ENSJJAG00000015779	Tnrc6b	98	61.821	ENSLACG00000000628	-	99	62.073	Latimeria_chalumnae
ENSJJAG00000015779	Tnrc6b	76	93.605	ENSLAFG00000014473	TNRC6B	100	93.465	Loxodonta_africana
ENSJJAG00000015779	Tnrc6b	96	95.512	ENSMFAG00000003862	TNRC6B	100	94.693	Macaca_fascicularis
ENSJJAG00000015779	Tnrc6b	100	95.485	ENSMMUG00000021345	TNRC6B	100	95.755	Macaca_mulatta
ENSJJAG00000015779	Tnrc6b	97	95.322	ENSMNEG00000042745	TNRC6B	99	95.094	Macaca_nemestrina
ENSJJAG00000015779	Tnrc6b	96	95.350	ENSMLEG00000041780	TNRC6B	100	95.755	Mandrillus_leucophaeus
ENSJJAG00000015779	Tnrc6b	98	83.978	ENSMGAG00000012333	TNRC6B	99	82.330	Meleagris_gallopavo
ENSJJAG00000015779	Tnrc6b	100	94.638	ENSMAUG00000016123	Tnrc6b	98	95.630	Mesocricetus_auratus
ENSJJAG00000015779	Tnrc6b	99	92.584	ENSMICG00000014056	TNRC6B	100	95.047	Microcebus_murinus
ENSJJAG00000015779	Tnrc6b	97	95.500	ENSMOCG00000020334	Tnrc6b	100	95.500	Microtus_ochrogaster
ENSJJAG00000015779	Tnrc6b	100	95.856	MGP_CAROLIEiJ_G0020043	Tnrc6b	100	95.856	Mus_caroli
ENSJJAG00000015779	Tnrc6b	100	95.359	ENSMUSG00000047888	Tnrc6b	100	95.580	Mus_musculus
ENSJJAG00000015779	Tnrc6b	100	94.914	MGP_PahariEiJ_G0020045	Tnrc6b	100	95.135	Mus_pahari
ENSJJAG00000015779	Tnrc6b	100	96.022	MGP_SPRETEiJ_G0020941	Tnrc6b	100	96.022	Mus_spretus
ENSJJAG00000015779	Tnrc6b	95	96.952	ENSMPUG00000016442	TNRC6B	99	87.285	Mustela_putorius_furo
ENSJJAG00000015779	Tnrc6b	97	90.176	ENSMLUG00000008765	TNRC6B	99	89.863	Myotis_lucifugus
ENSJJAG00000015779	Tnrc6b	100	95.645	ENSNGAG00000021294	Tnrc6b	100	95.480	Nannospalax_galili
ENSJJAG00000015779	Tnrc6b	86	93.078	ENSNLEG00000015311	TNRC6B	100	96.222	Nomascus_leucogenys
ENSJJAG00000015779	Tnrc6b	91	85.196	ENSOPRG00000012054	TNRC6B	88	91.266	Ochotona_princeps
ENSJJAG00000015779	Tnrc6b	100	95.422	ENSODEG00000013146	TNRC6B	100	95.422	Octodon_degus
ENSJJAG00000015779	Tnrc6b	100	94.766	ENSOCUG00000016128	TNRC6B	100	94.656	Oryctolagus_cuniculus
ENSJJAG00000015779	Tnrc6b	97	90.581	ENSOGAG00000011096	TNRC6B	99	90.049	Otolemur_garnettii
ENSJJAG00000015779	Tnrc6b	100	94.243	ENSOARG00000017238	TNRC6B	100	94.079	Ovis_aries
ENSJJAG00000015779	Tnrc6b	96	95.740	ENSPPAG00000028514	TNRC6B	100	96.217	Pan_paniscus
ENSJJAG00000015779	Tnrc6b	97	92.025	ENSPPRG00000017741	TNRC6B	100	95.760	Panthera_pardus
ENSJJAG00000015779	Tnrc6b	97	87.310	ENSPTIG00000022064	TNRC6B	98	89.282	Panthera_tigris_altaica
ENSJJAG00000015779	Tnrc6b	96	95.089	ENSPTRG00000047826	TNRC6B	100	95.986	Pan_troglodytes
ENSJJAG00000015779	Tnrc6b	96	86.962	ENSPANG00000009271	TNRC6B	99	92.742	Papio_anubis
ENSJJAG00000015779	Tnrc6b	97	86.858	ENSPSIG00000005318	TNRC6B	99	87.028	Pelodiscus_sinensis
ENSJJAG00000015779	Tnrc6b	100	94.870	ENSPEMG00000011403	Tnrc6b	100	95.091	Peromyscus_maniculatus_bairdii
ENSJJAG00000015779	Tnrc6b	97	85.731	ENSPCIG00000020347	TNRC6B	99	85.731	Phascolarctos_cinereus
ENSJJAG00000015779	Tnrc6b	68	49.700	ENSPFOG00000006033	-	80	42.326	Poecilia_formosa
ENSJJAG00000015779	Tnrc6b	97	90.904	ENSPPYG00000011849	TNRC6B	99	92.081	Pongo_abelii
ENSJJAG00000015779	Tnrc6b	77	87.706	ENSPCAG00000008739	TNRC6B	77	88.355	Procavia_capensis
ENSJJAG00000015779	Tnrc6b	99	93.211	ENSPCOG00000020790	TNRC6B	100	95.873	Propithecus_coquereli
ENSJJAG00000015779	Tnrc6b	93	94.512	ENSPVAG00000004975	TNRC6B	94	94.512	Pteropus_vampyrus
ENSJJAG00000015779	Tnrc6b	74	43.530	ENSPNAG00000011713	tnrc6b	93	43.399	Pygocentrus_nattereri
ENSJJAG00000015779	Tnrc6b	100	94.829	ENSRNOG00000024907	Tnrc6b	100	94.939	Rattus_norvegicus
ENSJJAG00000015779	Tnrc6b	95	95.329	ENSRBIG00000035576	TNRC6B	99	95.519	Rhinopithecus_bieti
ENSJJAG00000015779	Tnrc6b	97	95.379	ENSRROG00000031135	TNRC6B	100	95.519	Rhinopithecus_roxellana
ENSJJAG00000015779	Tnrc6b	97	92.071	ENSSBOG00000029743	TNRC6B	96	95.868	Saimiri_boliviensis_boliviensis
ENSJJAG00000015779	Tnrc6b	97	80.950	ENSSHAG00000009692	TNRC6B	99	80.065	Sarcophilus_harrisii
ENSJJAG00000015779	Tnrc6b	65	84.061	ENSSARG00000007971	-	70	84.327	Sorex_araneus
ENSJJAG00000015779	Tnrc6b	100	94.928	ENSSSCG00000000078	TNRC6B	99	94.624	Sus_scrofa
ENSJJAG00000015779	Tnrc6b	100	89.366	ENSTTRG00000011465	TNRC6B	100	89.311	Tursiops_truncatus
ENSJJAG00000015779	Tnrc6b	100	93.650	ENSUAMG00000007174	TNRC6B	98	95.118	Ursus_americanus
ENSJJAG00000015779	Tnrc6b	97	95.263	ENSUMAG00000014336	TNRC6B	100	94.979	Ursus_maritimus
ENSJJAG00000015779	Tnrc6b	68	89.697	ENSVPAG00000001467	TNRC6B	75	88.485	Vicugna_pacos
ENSJJAG00000015779	Tnrc6b	100	95.595	ENSVVUG00000007064	TNRC6B	100	95.429	Vulpes_vulpes