EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000015811 (Gene tree)
Gene ID: 101598165
Gene Symbol: Prpf38a
Alias: 2410002M20Rik
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 11942 bases
Position: chrJH725670.1:283284-295225
Accession: 101598165
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000012901	PRP38	PF03371.15	1.1e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000019385	-	939	XM_004672879	ENSJJAP00000012901	312 (aa)	XP_004672936	UPI0003330081

Gene Model

Click here to download ENSJJAG00000015811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000015811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000015811	Prpf38a	100	98.718	ENSG00000134748	PRPF38A	100	98.718	Homo_sapiens
ENSJJAG00000015811	Prpf38a	71	87.783	ENSAPOG00000011652	prpf38a	100	81.150	Acanthochromis_polyacanthus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSAMEG00000009319	PRPF38A	100	98.718	Ailuropoda_melanoleuca
ENSJJAG00000015811	Prpf38a	71	85.973	ENSACIG00000012292	prpf38a	76	85.281	Amphilophus_citrinellus
ENSJJAG00000015811	Prpf38a	71	87.783	ENSAOCG00000018004	prpf38a	100	81.150	Amphiprion_ocellaris
ENSJJAG00000015811	Prpf38a	71	87.783	ENSAPEG00000021414	prpf38a	100	81.150	Amphiprion_percula
ENSJJAG00000015811	Prpf38a	71	88.235	ENSATEG00000004608	prpf38a	100	81.150	Anabas_testudineus
ENSJJAG00000015811	Prpf38a	79	97.571	ENSAPLG00000005827	PRPF38A	99	97.571	Anas_platyrhynchos
ENSJJAG00000015811	Prpf38a	100	95.513	ENSACAG00000008249	PRPF38A	100	95.513	Anolis_carolinensis
ENSJJAG00000015811	Prpf38a	100	98.718	ENSANAG00000027839	PRPF38A	100	98.718	Aotus_nancymaae
ENSJJAG00000015811	Prpf38a	100	67.405	ENSANAG00000029204	-	100	62.342	Aotus_nancymaae
ENSJJAG00000015811	Prpf38a	71	85.973	ENSACLG00000021595	prpf38a	100	79.872	Astatotilapia_calliptera
ENSJJAG00000015811	Prpf38a	100	81.789	ENSAMXG00000029274	prpf38a	100	81.789	Astyanax_mexicanus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSBTAG00000002720	PRPF38A	100	98.718	Bos_taurus
ENSJJAG00000015811	Prpf38a	63	62.564	WBGene00008380	prp-38	67	61.574	Caenorhabditis_elegans
ENSJJAG00000015811	Prpf38a	100	98.718	ENSCJAG00000021594	PRPF38A	100	98.718	Callithrix_jacchus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSCAFG00000003740	PRPF38A	100	98.718	Canis_familiaris
ENSJJAG00000015811	Prpf38a	100	98.718	ENSCAFG00020010939	PRPF38A	100	98.718	Canis_lupus_dingo
ENSJJAG00000015811	Prpf38a	100	98.718	ENSCHIG00000024730	PRPF38A	100	98.718	Capra_hircus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSTSYG00000009868	-	100	98.718	Carlito_syrichta
ENSJJAG00000015811	Prpf38a	86	97.398	ENSTSYG00000031994	-	95	97.398	Carlito_syrichta
ENSJJAG00000015811	Prpf38a	100	98.718	ENSCPOG00000005079	PRPF38A	100	98.718	Cavia_porcellus
ENSJJAG00000015811	Prpf38a	100	98.397	ENSCCAG00000026502	PRPF38A	100	98.397	Cebus_capucinus
ENSJJAG00000015811	Prpf38a	100	63.782	ENSCATG00000044190	-	100	62.500	Cercocebus_atys
ENSJJAG00000015811	Prpf38a	100	98.718	ENSCATG00000032296	PRPF38A	100	98.718	Cercocebus_atys
ENSJJAG00000015811	Prpf38a	100	98.718	ENSCLAG00000005816	PRPF38A	100	98.718	Chinchilla_lanigera
ENSJJAG00000015811	Prpf38a	78	97.917	ENSCHOG00000008388	PRPF38A	77	97.917	Choloepus_hoffmanni
ENSJJAG00000015811	Prpf38a	100	98.077	ENSCPBG00000014791	PRPF38A	100	98.077	Chrysemys_picta_bellii
ENSJJAG00000015811	Prpf38a	67	71.429	ENSCSAVG00000009580	-	78	65.678	Ciona_savignyi
ENSJJAG00000015811	Prpf38a	96	98.662	ENSCANG00000032608	PRPF38A	100	98.662	Colobus_angolensis_palliatus
ENSJJAG00000015811	Prpf38a	74	84.848	ENSCGRG00001002557	-	78	84.848	Cricetulus_griseus_chok1gshd
ENSJJAG00000015811	Prpf38a	100	99.038	ENSCGRG00001018502	-	100	99.038	Cricetulus_griseus_chok1gshd
ENSJJAG00000015811	Prpf38a	100	99.038	ENSCGRG00000014868	Prpf38a	100	99.038	Cricetulus_griseus_crigri
ENSJJAG00000015811	Prpf38a	71	87.330	ENSCSEG00000001269	prpf38a	79	86.580	Cynoglossus_semilaevis
ENSJJAG00000015811	Prpf38a	71	89.593	ENSCVAG00000012305	prpf38a	100	81.789	Cyprinodon_variegatus
ENSJJAG00000015811	Prpf38a	100	81.150	ENSDARG00000039213	prpf38a	100	81.150	Danio_rerio
ENSJJAG00000015811	Prpf38a	100	98.718	ENSDNOG00000042326	PRPF38A	100	98.718	Dasypus_novemcinctus
ENSJJAG00000015811	Prpf38a	84	82.890	ENSDORG00000025371	-	78	87.225	Dipodomys_ordii
ENSJJAG00000015811	Prpf38a	84	82.890	ENSDORG00000023691	-	78	87.225	Dipodomys_ordii
ENSJJAG00000015811	Prpf38a	100	85.256	ENSDORG00000023857	-	100	85.256	Dipodomys_ordii
ENSJJAG00000015811	Prpf38a	63	75.127	FBgn0050342	Prp38	57	76.064	Drosophila_melanogaster
ENSJJAG00000015811	Prpf38a	76	80.672	ENSEBUG00000012588	prpf38a	75	80.687	Eptatretus_burgeri
ENSJJAG00000015811	Prpf38a	100	98.718	ENSEASG00005014427	PRPF38A	100	98.718	Equus_asinus_asinus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSECAG00000022628	PRPF38A	100	98.718	Equus_caballus
ENSJJAG00000015811	Prpf38a	71	86.425	ENSELUG00000021094	prpf38a	100	80.192	Esox_lucius
ENSJJAG00000015811	Prpf38a	100	98.718	ENSFCAG00000002518	PRPF38A	100	98.718	Felis_catus
ENSJJAG00000015811	Prpf38a	87	96.310	ENSFALG00000005598	-	100	96.310	Ficedula_albicollis
ENSJJAG00000015811	Prpf38a	99	84.244	ENSFALG00000003612	-	77	89.177	Ficedula_albicollis
ENSJJAG00000015811	Prpf38a	100	98.397	ENSFDAG00000011287	PRPF38A	100	98.397	Fukomys_damarensis
ENSJJAG00000015811	Prpf38a	84	78.030	ENSFHEG00000014317	prpf38a	78	87.879	Fundulus_heteroclitus
ENSJJAG00000015811	Prpf38a	53	93.373	ENSGMOG00000011384	prpf38a	54	93.373	Gadus_morhua
ENSJJAG00000015811	Prpf38a	100	97.756	ENSGALG00000010627	PRPF38A	100	97.756	Gallus_gallus
ENSJJAG00000015811	Prpf38a	71	89.593	ENSGAFG00000012422	prpf38a	100	81.789	Gambusia_affinis
ENSJJAG00000015811	Prpf38a	71	85.202	ENSGACG00000005423	prpf38a	100	79.048	Gasterosteus_aculeatus
ENSJJAG00000015811	Prpf38a	100	98.397	ENSGAGG00000020547	PRPF38A	100	98.397	Gopherus_agassizii
ENSJJAG00000015811	Prpf38a	100	98.718	ENSGGOG00000003940	PRPF38A	100	98.718	Gorilla_gorilla
ENSJJAG00000015811	Prpf38a	61	90.476	ENSHBUG00000020572	prpf38a	80	90.426	Haplochromis_burtoni
ENSJJAG00000015811	Prpf38a	100	98.718	ENSHGLG00000000475	PRPF38A	100	98.718	Heterocephalus_glaber_female
ENSJJAG00000015811	Prpf38a	100	82.692	ENSHGLG00000007918	-	100	82.372	Heterocephalus_glaber_female
ENSJJAG00000015811	Prpf38a	100	98.718	ENSHGLG00100008935	PRPF38A	100	98.718	Heterocephalus_glaber_male
ENSJJAG00000015811	Prpf38a	100	82.692	ENSHGLG00100003928	-	100	82.372	Heterocephalus_glaber_male
ENSJJAG00000015811	Prpf38a	87	68.635	ENSHCOG00000020781	prpf38a	59	89.894	Hippocampus_comes
ENSJJAG00000015811	Prpf38a	74	86.638	ENSIPUG00000005757	prpf38a	75	86.638	Ictalurus_punctatus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSSTOG00000015610	PRPF38A	100	98.718	Ictidomys_tridecemlineatus
ENSJJAG00000015811	Prpf38a	71	89.140	ENSKMAG00000006588	prpf38a	100	81.470	Kryptolebias_marmoratus
ENSJJAG00000015811	Prpf38a	96	78.523	ENSLBEG00000020585	prpf38a	100	78.914	Labrus_bergylta
ENSJJAG00000015811	Prpf38a	100	92.308	ENSLACG00000011495	PRPF38A	100	92.308	Latimeria_chalumnae
ENSJJAG00000015811	Prpf38a	100	79.553	ENSLOCG00000006262	prpf38a	100	80.831	Lepisosteus_oculatus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSLAFG00000025862	PRPF38A	100	98.718	Loxodonta_africana
ENSJJAG00000015811	Prpf38a	100	98.718	ENSMFAG00000039449	PRPF38A	100	98.718	Macaca_fascicularis
ENSJJAG00000015811	Prpf38a	87	97.794	ENSMMUG00000014333	PRPF38A	98	97.794	Macaca_mulatta
ENSJJAG00000015811	Prpf38a	100	64.103	ENSMNEG00000040242	-	100	63.141	Macaca_nemestrina
ENSJJAG00000015811	Prpf38a	100	98.718	ENSMNEG00000031221	PRPF38A	100	98.718	Macaca_nemestrina
ENSJJAG00000015811	Prpf38a	100	98.718	ENSMLEG00000041105	PRPF38A	100	98.718	Mandrillus_leucophaeus
ENSJJAG00000015811	Prpf38a	71	88.235	ENSMAMG00000015431	prpf38a	100	81.470	Mastacembelus_armatus
ENSJJAG00000015811	Prpf38a	71	85.973	ENSMZEG00005017838	prpf38a	100	79.872	Maylandia_zebra
ENSJJAG00000015811	Prpf38a	96	97.659	ENSMGAG00000011176	PRPF38A	100	97.659	Meleagris_gallopavo
ENSJJAG00000015811	Prpf38a	85	94.318	ENSMAUG00000018029	-	87	94.372	Mesocricetus_auratus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSMICG00000014193	PRPF38A	100	98.718	Microcebus_murinus
ENSJJAG00000015811	Prpf38a	100	99.038	ENSMOCG00000013080	Prpf38a	100	99.038	Microtus_ochrogaster
ENSJJAG00000015811	Prpf38a	83	81.008	ENSMMOG00000016972	prpf38a	81	86.580	Mola_mola
ENSJJAG00000015811	Prpf38a	100	97.764	ENSMODG00000000644	PRPF38A	100	97.764	Monodelphis_domestica
ENSJJAG00000015811	Prpf38a	71	88.235	ENSMALG00000019363	prpf38a	97	81.470	Monopterus_albus
ENSJJAG00000015811	Prpf38a	100	98.077	MGP_CAROLIEiJ_G0026269	Prpf38a	100	98.077	Mus_caroli
ENSJJAG00000015811	Prpf38a	100	98.077	ENSMUSG00000063800	Prpf38a	100	98.077	Mus_musculus
ENSJJAG00000015811	Prpf38a	100	98.077	MGP_PahariEiJ_G0028602	Prpf38a	100	98.077	Mus_pahari
ENSJJAG00000015811	Prpf38a	100	97.756	MGP_SPRETEiJ_G0027238	Prpf38a	100	97.756	Mus_spretus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSMPUG00000006896	PRPF38A	100	98.718	Mustela_putorius_furo
ENSJJAG00000015811	Prpf38a	100	99.038	ENSNGAG00000011884	Prpf38a	100	99.038	Nannospalax_galili
ENSJJAG00000015811	Prpf38a	71	84.615	ENSNBRG00000004013	prpf38a	74	83.983	Neolamprologus_brichardi
ENSJJAG00000015811	Prpf38a	100	66.346	ENSNLEG00000033398	-	94	66.346	Nomascus_leucogenys
ENSJJAG00000015811	Prpf38a	97	72.517	ENSNLEG00000012592	-	99	72.517	Nomascus_leucogenys
ENSJJAG00000015811	Prpf38a	93	98.616	ENSNLEG00000017999	PRPF38A	93	98.616	Nomascus_leucogenys
ENSJJAG00000015811	Prpf38a	100	94.872	ENSMEUG00000003860	PRPF38A	100	94.872	Notamacropus_eugenii
ENSJJAG00000015811	Prpf38a	77	99.167	ENSOPRG00000008985	PRPF38A	100	99.167	Ochotona_princeps
ENSJJAG00000015811	Prpf38a	100	98.718	ENSODEG00000005869	PRPF38A	100	98.718	Octodon_degus
ENSJJAG00000015811	Prpf38a	71	86.425	ENSONIG00000007816	prpf38a	100	80.192	Oreochromis_niloticus
ENSJJAG00000015811	Prpf38a	100	65.605	ENSOANG00000009541	-	100	65.605	Ornithorhynchus_anatinus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSOCUG00000000963	PRPF38A	100	98.718	Oryctolagus_cuniculus
ENSJJAG00000015811	Prpf38a	96	81.667	ENSORLG00000013485	prpf38a	99	81.731	Oryzias_latipes
ENSJJAG00000015811	Prpf38a	96	81.667	ENSORLG00020002130	prpf38a	99	81.731	Oryzias_latipes_hni
ENSJJAG00000015811	Prpf38a	96	81.333	ENSORLG00015021393	prpf38a	99	81.410	Oryzias_latipes_hsok
ENSJJAG00000015811	Prpf38a	96	81.208	ENSOMEG00000016333	prpf38a	100	81.150	Oryzias_melastigma
ENSJJAG00000015811	Prpf38a	100	98.718	ENSOGAG00000005423	PRPF38A	100	98.718	Otolemur_garnettii
ENSJJAG00000015811	Prpf38a	100	98.718	ENSOARG00000005373	PRPF38A	100	98.718	Ovis_aries
ENSJJAG00000015811	Prpf38a	100	98.718	ENSPPAG00000030905	PRPF38A	100	98.718	Pan_paniscus
ENSJJAG00000015811	Prpf38a	100	76.603	ENSPPAG00000033867	-	100	76.603	Pan_paniscus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSPPRG00000013268	PRPF38A	100	98.718	Panthera_pardus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSPTIG00000015419	PRPF38A	100	98.718	Panthera_tigris_altaica
ENSJJAG00000015811	Prpf38a	100	98.718	ENSPTRG00000000739	PRPF38A	100	98.718	Pan_troglodytes
ENSJJAG00000015811	Prpf38a	100	98.718	ENSPANG00000015483	PRPF38A	100	98.718	Papio_anubis
ENSJJAG00000015811	Prpf38a	100	78.846	ENSPKIG00000011439	prpf38a	100	80.128	Paramormyrops_kingsleyae
ENSJJAG00000015811	Prpf38a	100	97.756	ENSPSIG00000017487	PRPF38A	100	97.756	Pelodiscus_sinensis
ENSJJAG00000015811	Prpf38a	81	81.890	ENSPMGG00000021352	prpf38a	99	77.994	Periophthalmus_magnuspinnatus
ENSJJAG00000015811	Prpf38a	100	92.063	ENSPEMG00000011212	-	100	91.111	Peromyscus_maniculatus_bairdii
ENSJJAG00000015811	Prpf38a	100	99.038	ENSPEMG00000023277	-	100	99.038	Peromyscus_maniculatus_bairdii
ENSJJAG00000015811	Prpf38a	100	97.444	ENSPCIG00000022369	-	100	97.444	Phascolarctos_cinereus
ENSJJAG00000015811	Prpf38a	83	80.695	ENSPFOG00000004248	prpf38a	100	81.789	Poecilia_formosa
ENSJJAG00000015811	Prpf38a	92	76.109	ENSPLAG00000010328	prpf38a	100	81.789	Poecilia_latipinna
ENSJJAG00000015811	Prpf38a	84	78.571	ENSPMEG00000011804	prpf38a	100	81.789	Poecilia_mexicana
ENSJJAG00000015811	Prpf38a	95	73.000	ENSPREG00000002835	prpf38a	58	93.085	Poecilia_reticulata
ENSJJAG00000015811	Prpf38a	100	90.221	ENSPPYG00000001348	PRPF38A	100	90.221	Pongo_abelii
ENSJJAG00000015811	Prpf38a	100	98.077	ENSPCAG00000013328	PRPF38A	100	98.077	Procavia_capensis
ENSJJAG00000015811	Prpf38a	100	98.718	ENSPCOG00000016387	-	100	98.718	Propithecus_coquereli
ENSJJAG00000015811	Prpf38a	100	75.641	ENSPCOG00000020709	-	76	80.087	Propithecus_coquereli
ENSJJAG00000015811	Prpf38a	100	98.718	ENSPVAG00000009803	PRPF38A	100	98.718	Pteropus_vampyrus
ENSJJAG00000015811	Prpf38a	71	85.973	ENSPNYG00000005571	prpf38a	100	79.872	Pundamilia_nyererei
ENSJJAG00000015811	Prpf38a	100	81.789	ENSPNAG00000010399	prpf38a	100	81.789	Pygocentrus_nattereri
ENSJJAG00000015811	Prpf38a	100	98.718	ENSRNOG00000009451	Prpf38a	100	98.718	Rattus_norvegicus
ENSJJAG00000015811	Prpf38a	100	62.179	ENSRBIG00000034053	-	100	58.974	Rhinopithecus_bieti
ENSJJAG00000015811	Prpf38a	100	98.718	ENSRBIG00000036442	PRPF38A	100	98.718	Rhinopithecus_bieti
ENSJJAG00000015811	Prpf38a	100	98.718	ENSRROG00000032788	PRPF38A	100	98.718	Rhinopithecus_roxellana
ENSJJAG00000015811	Prpf38a	98	77.451	ENSRROG00000040003	-	99	77.451	Rhinopithecus_roxellana
ENSJJAG00000015811	Prpf38a	100	98.718	ENSSBOG00000019515	PRPF38A	100	98.718	Saimiri_boliviensis_boliviensis
ENSJJAG00000015811	Prpf38a	87	97.048	ENSSHAG00000006906	-	100	97.048	Sarcophilus_harrisii
ENSJJAG00000015811	Prpf38a	96	71.053	ENSSHAG00000006029	-	74	81.900	Sarcophilus_harrisii
ENSJJAG00000015811	Prpf38a	100	78.275	ENSSFOG00015013572	prpf38a	100	78.914	Scleropages_formosus
ENSJJAG00000015811	Prpf38a	71	88.688	ENSSMAG00000015379	prpf38a	75	87.879	Scophthalmus_maximus
ENSJJAG00000015811	Prpf38a	71	88.235	ENSSDUG00000001324	prpf38a	100	81.470	Seriola_dumerili
ENSJJAG00000015811	Prpf38a	71	88.235	ENSSLDG00000014803	prpf38a	100	81.470	Seriola_lalandi_dorsalis
ENSJJAG00000015811	Prpf38a	100	81.410	ENSSARG00000014458	PRPF38A	100	81.410	Sorex_araneus
ENSJJAG00000015811	Prpf38a	100	95.513	ENSSPUG00000013259	PRPF38A	100	95.513	Sphenodon_punctatus
ENSJJAG00000015811	Prpf38a	71	69.683	ENSSPAG00000010449	prpf38a	72	69.697	Stegastes_partitus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSSSCG00000028288	PRPF38A	100	98.718	Sus_scrofa
ENSJJAG00000015811	Prpf38a	100	93.269	ENSTGUG00000008995	PRPF38A	100	93.269	Taeniopygia_guttata
ENSJJAG00000015811	Prpf38a	71	87.330	ENSTRUG00000003374	prpf38a	71	86.580	Takifugu_rubripes
ENSJJAG00000015811	Prpf38a	71	86.099	ENSTNIG00000005533	prpf38a	100	79.683	Tetraodon_nigroviridis
ENSJJAG00000015811	Prpf38a	100	98.077	ENSTBEG00000000725	PRPF38A	100	98.077	Tupaia_belangeri
ENSJJAG00000015811	Prpf38a	100	98.718	ENSTTRG00000016139	PRPF38A	100	98.718	Tursiops_truncatus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSUAMG00000000625	PRPF38A	100	98.718	Ursus_americanus
ENSJJAG00000015811	Prpf38a	100	98.718	ENSUMAG00000022674	PRPF38A	100	98.718	Ursus_maritimus
ENSJJAG00000015811	Prpf38a	74	98.268	ENSVPAG00000000907	PRPF38A	100	92.949	Vicugna_pacos
ENSJJAG00000015811	Prpf38a	100	98.718	ENSVVUG00000004475	PRPF38A	100	98.718	Vulpes_vulpes
ENSJJAG00000015811	Prpf38a	100	84.345	ENSXETG00000008060	prpf38a	100	88.179	Xenopus_tropicalis
ENSJJAG00000015811	Prpf38a	71	87.444	ENSXCOG00000007393	prpf38a	77	86.695	Xiphophorus_couchianus
ENSJJAG00000015811	Prpf38a	71	89.593	ENSXMAG00000026143	prpf38a	100	81.789	Xiphophorus_maculatus