EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000016178 (Gene tree)
Gene ID: -
Gene Symbol: Rtca
Alias: 2310009A18Rik|Rtcd1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 22128 bases
Position: chrJH725465.1:12225620-12247747
Accession: 101614101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000013408	RTC	PF01137.21	3.4e-59	1	2
ENSJJAP00000013408	RTC	PF01137.21	3.4e-59	2	2
ENSJJAP00000013408	RTC_insert	PF05189.13	6.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000019898	-	885	XM_004658926	ENSJJAP00000013408	294 (aa)	XP_004658983	-

Gene Model

Click here to download ENSJJAG00000016178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000016178's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000016178	Rtca	100	66.393	ENSG00000137996	RTCA	100	95.918	Homo_sapiens
ENSJJAG00000016178	Rtca	98	51.944	ENSAPOG00000001345	rtca	98	51.944	Acanthochromis_polyacanthus
ENSJJAG00000016178	Rtca	73	65.476	ENSAMEG00000008855	RTCA	94	65.476	Ailuropoda_melanoleuca
ENSJJAG00000016178	Rtca	98	51.667	ENSACIG00000019643	rtca	99	51.667	Amphilophus_citrinellus
ENSJJAG00000016178	Rtca	100	50.959	ENSAOCG00000014979	rtca	99	50.959	Amphiprion_ocellaris
ENSJJAG00000016178	Rtca	100	50.959	ENSAPEG00000006945	rtca	99	50.959	Amphiprion_percula
ENSJJAG00000016178	Rtca	100	50.685	ENSATEG00000006315	rtca	100	50.685	Anabas_testudineus
ENSJJAG00000016178	Rtca	95	57.062	ENSAPLG00000015430	RTCA	100	57.062	Anas_platyrhynchos
ENSJJAG00000016178	Rtca	100	65.847	ENSANAG00000025446	RTCA	100	65.847	Aotus_nancymaae
ENSJJAG00000016178	Rtca	100	51.233	ENSACLG00000020770	rtca	99	51.233	Astatotilapia_calliptera
ENSJJAG00000016178	Rtca	100	52.877	ENSAMXG00000043271	rtca	100	52.877	Astyanax_mexicanus
ENSJJAG00000016178	Rtca	100	68.033	ENSBTAG00000006321	RTCA	100	68.033	Bos_taurus
ENSJJAG00000016178	Rtca	100	66.393	ENSCJAG00000003398	RTCA	100	66.393	Callithrix_jacchus
ENSJJAG00000016178	Rtca	100	66.667	ENSCAFG00000020010	RTCA	68	66.667	Canis_familiaris
ENSJJAG00000016178	Rtca	100	66.667	ENSCAFG00020011528	RTCA	57	66.667	Canis_lupus_dingo
ENSJJAG00000016178	Rtca	100	67.760	ENSCHIG00000018937	RTCA	100	67.760	Capra_hircus
ENSJJAG00000016178	Rtca	100	68.033	ENSTSYG00000011305	RTCA	100	68.033	Carlito_syrichta
ENSJJAG00000016178	Rtca	100	66.393	ENSCCAG00000021844	RTCA	100	66.393	Cebus_capucinus
ENSJJAG00000016178	Rtca	100	64.380	ENSCATG00000019364	RTCA	100	64.380	Cercocebus_atys
ENSJJAG00000016178	Rtca	83	63.091	ENSCLAG00000006125	RTCA	100	63.091	Chinchilla_lanigera
ENSJJAG00000016178	Rtca	100	66.940	ENSCSAG00000001509	RTCA	100	66.940	Chlorocebus_sabaeus
ENSJJAG00000016178	Rtca	100	67.760	ENSCHOG00000005211	RTCA	100	67.760	Choloepus_hoffmanni
ENSJJAG00000016178	Rtca	100	60.656	ENSCPBG00000026658	RTCA	100	60.656	Chrysemys_picta_bellii
ENSJJAG00000016178	Rtca	98	44.444	ENSCING00000007875	-	98	44.444	Ciona_intestinalis
ENSJJAG00000016178	Rtca	97	44.413	ENSCSAVG00000007269	-	98	44.413	Ciona_savignyi
ENSJJAG00000016178	Rtca	100	66.940	ENSCANG00000040106	RTCA	100	66.940	Colobus_angolensis_palliatus
ENSJJAG00000016178	Rtca	73	64.683	ENSCGRG00001013163	Rtca	80	64.683	Cricetulus_griseus_chok1gshd
ENSJJAG00000016178	Rtca	99	50.275	ENSCSEG00000000530	rtca	98	50.275	Cynoglossus_semilaevis
ENSJJAG00000016178	Rtca	100	49.422	ENSCVAG00000021809	rtca	100	49.422	Cyprinodon_variegatus
ENSJJAG00000016178	Rtca	100	53.151	ENSDARG00000002215	rtca	100	53.151	Danio_rerio
ENSJJAG00000016178	Rtca	100	67.486	ENSDNOG00000000456	RTCA	100	67.486	Dasypus_novemcinctus
ENSJJAG00000016178	Rtca	100	66.940	ENSDORG00000005448	Rtca	100	66.940	Dipodomys_ordii
ENSJJAG00000016178	Rtca	97	30.726	FBgn0025630	Rtca	98	30.726	Drosophila_melanogaster
ENSJJAG00000016178	Rtca	94	47.385	ENSEBUG00000008556	rtca	97	47.385	Eptatretus_burgeri
ENSJJAG00000016178	Rtca	100	66.393	ENSEASG00005015926	RTCA	100	66.393	Equus_asinus_asinus
ENSJJAG00000016178	Rtca	100	66.393	ENSECAG00000019831	RTCA	100	66.393	Equus_caballus
ENSJJAG00000016178	Rtca	89	58.092	ENSEEUG00000001165	RTCA	100	58.092	Erinaceus_europaeus
ENSJJAG00000016178	Rtca	98	53.333	ENSELUG00000003741	rtca	99	53.333	Esox_lucius
ENSJJAG00000016178	Rtca	100	66.940	ENSFCAG00000024460	RTCA	100	66.940	Felis_catus
ENSJJAG00000016178	Rtca	91	59.118	ENSFALG00000002443	RTCA	91	59.118	Ficedula_albicollis
ENSJJAG00000016178	Rtca	100	67.213	ENSFDAG00000012070	-	100	67.213	Fukomys_damarensis
ENSJJAG00000016178	Rtca	98	50.552	ENSFDAG00000016084	-	100	50.552	Fukomys_damarensis
ENSJJAG00000016178	Rtca	62	53.456	ENSFHEG00000002868	rtca	89	53.883	Fundulus_heteroclitus
ENSJJAG00000016178	Rtca	100	50.137	ENSGMOG00000013264	rtca	100	50.137	Gadus_morhua
ENSJJAG00000016178	Rtca	100	60.656	ENSGALG00000005277	RTCA	100	60.656	Gallus_gallus
ENSJJAG00000016178	Rtca	100	52.877	ENSGAFG00000011853	rtca	99	52.877	Gambusia_affinis
ENSJJAG00000016178	Rtca	100	51.781	ENSGACG00000013497	rtca	100	51.781	Gasterosteus_aculeatus
ENSJJAG00000016178	Rtca	75	56.655	ENSGAGG00000023306	RTCA	100	56.655	Gopherus_agassizii
ENSJJAG00000016178	Rtca	100	66.393	ENSGGOG00000009546	-	100	66.393	Gorilla_gorilla
ENSJJAG00000016178	Rtca	100	66.120	ENSGGOG00000044018	-	100	66.120	Gorilla_gorilla
ENSJJAG00000016178	Rtca	100	50.959	ENSHBUG00000002114	rtca	99	50.959	Haplochromis_burtoni
ENSJJAG00000016178	Rtca	100	67.213	ENSHGLG00000002617	RTCA	100	67.213	Heterocephalus_glaber_female
ENSJJAG00000016178	Rtca	100	67.213	ENSHGLG00100006056	RTCA	100	67.213	Heterocephalus_glaber_male
ENSJJAG00000016178	Rtca	100	46.849	ENSHCOG00000020628	rtca	89	46.849	Hippocampus_comes
ENSJJAG00000016178	Rtca	100	53.151	ENSIPUG00000024803	rtca	100	53.151	Ictalurus_punctatus
ENSJJAG00000016178	Rtca	100	60.109	ENSSTOG00000013528	-	100	60.109	Ictidomys_tridecemlineatus
ENSJJAG00000016178	Rtca	100	59.280	ENSSTOG00000033099	-	100	59.280	Ictidomys_tridecemlineatus
ENSJJAG00000016178	Rtca	98	52.778	ENSKMAG00000006651	rtca	98	52.778	Kryptolebias_marmoratus
ENSJJAG00000016178	Rtca	98	52.222	ENSLBEG00000028971	rtca	99	52.222	Labrus_bergylta
ENSJJAG00000016178	Rtca	85	50.000	ENSLBEG00000002448	-	99	50.000	Labrus_bergylta
ENSJJAG00000016178	Rtca	100	55.738	ENSLACG00000013666	RTCA	100	55.738	Latimeria_chalumnae
ENSJJAG00000016178	Rtca	100	51.913	ENSLOCG00000000093	rtca	99	51.913	Lepisosteus_oculatus
ENSJJAG00000016178	Rtca	100	67.213	ENSLAFG00000001473	RTCA	100	67.213	Loxodonta_africana
ENSJJAG00000016178	Rtca	100	66.940	ENSMFAG00000034132	RTCA	100	66.940	Macaca_fascicularis
ENSJJAG00000016178	Rtca	100	66.393	ENSMMUG00000019105	RTCA	100	66.393	Macaca_mulatta
ENSJJAG00000016178	Rtca	81	61.489	ENSMNEG00000037163	RTCA	100	61.489	Macaca_nemestrina
ENSJJAG00000016178	Rtca	100	57.186	ENSMLEG00000042151	RTCA	100	57.186	Mandrillus_leucophaeus
ENSJJAG00000016178	Rtca	100	52.329	ENSMAMG00000016536	rtca	100	52.329	Mastacembelus_armatus
ENSJJAG00000016178	Rtca	100	51.233	ENSMZEG00005017945	rtca	99	51.233	Maylandia_zebra
ENSJJAG00000016178	Rtca	84	56.426	ENSMGAG00000006892	RTCA	99	56.426	Meleagris_gallopavo
ENSJJAG00000016178	Rtca	100	67.213	ENSMAUG00000008488	Rtca	100	67.213	Mesocricetus_auratus
ENSJJAG00000016178	Rtca	81	62.460	ENSMICG00000008643	RTCA	100	62.460	Microcebus_murinus
ENSJJAG00000016178	Rtca	100	67.486	ENSMOCG00000016660	Rtca	100	67.486	Microtus_ochrogaster
ENSJJAG00000016178	Rtca	81	49.026	ENSMMOG00000007750	rtca	100	49.026	Mola_mola
ENSJJAG00000016178	Rtca	100	63.661	ENSMODG00000003557	RTCA	100	63.661	Monodelphis_domestica
ENSJJAG00000016178	Rtca	100	53.425	ENSMALG00000020844	rtca	100	53.425	Monopterus_albus
ENSJJAG00000016178	Rtca	100	67.486	MGP_CAROLIEiJ_G0025565	Rtca	92	93.750	Mus_caroli
ENSJJAG00000016178	Rtca	100	67.486	ENSMUSG00000000339	Rtca	92	93.750	Mus_musculus
ENSJJAG00000016178	Rtca	100	67.213	MGP_PahariEiJ_G0027011	Rtca	92	93.750	Mus_pahari
ENSJJAG00000016178	Rtca	100	67.486	MGP_SPRETEiJ_G0026515	Rtca	92	93.750	Mus_spretus
ENSJJAG00000016178	Rtca	100	66.940	ENSMPUG00000012119	RTCA	100	66.940	Mustela_putorius_furo
ENSJJAG00000016178	Rtca	100	64.033	ENSMLUG00000009922	RTCA	100	64.033	Myotis_lucifugus
ENSJJAG00000016178	Rtca	100	66.667	ENSNGAG00000011540	Rtca	99	66.667	Nannospalax_galili
ENSJJAG00000016178	Rtca	100	50.959	ENSNBRG00000003062	rtca	99	50.959	Neolamprologus_brichardi
ENSJJAG00000016178	Rtca	100	66.393	ENSNLEG00000031426	RTCA	100	66.393	Nomascus_leucogenys
ENSJJAG00000016178	Rtca	60	82.609	ENSMEUG00000010030	-	51	84.615	Notamacropus_eugenii
ENSJJAG00000016178	Rtca	73	59.127	ENSOPRG00000012092	RTCA	66	59.127	Ochotona_princeps
ENSJJAG00000016178	Rtca	94	66.379	ENSODEG00000006990	RTCA	96	66.667	Octodon_degus
ENSJJAG00000016178	Rtca	100	50.959	ENSONIG00000007753	rtca	99	50.959	Oreochromis_niloticus
ENSJJAG00000016178	Rtca	83	58.991	ENSOANG00000012055	RTCA	98	58.991	Ornithorhynchus_anatinus
ENSJJAG00000016178	Rtca	100	67.213	ENSOCUG00000014247	RTCA	100	67.213	Oryctolagus_cuniculus
ENSJJAG00000016178	Rtca	100	51.781	ENSORLG00000013605	rtca	100	51.781	Oryzias_latipes
ENSJJAG00000016178	Rtca	100	52.055	ENSORLG00020001904	rtca	100	52.055	Oryzias_latipes_hni
ENSJJAG00000016178	Rtca	100	52.055	ENSORLG00015021064	rtca	100	52.055	Oryzias_latipes_hsok
ENSJJAG00000016178	Rtca	100	51.781	ENSOMEG00000000756	rtca	100	51.781	Oryzias_melastigma
ENSJJAG00000016178	Rtca	100	59.563	ENSOGAG00000005627	RTCA	100	59.563	Otolemur_garnettii
ENSJJAG00000016178	Rtca	84	63.608	ENSOARG00000018122	RTCA	100	63.608	Ovis_aries
ENSJJAG00000016178	Rtca	100	64.380	ENSPPAG00000035119	RTCA	100	64.380	Pan_paniscus
ENSJJAG00000016178	Rtca	100	66.940	ENSPPRG00000000350	RTCA	100	66.940	Panthera_pardus
ENSJJAG00000016178	Rtca	100	66.667	ENSPTIG00000012816	RTCA	100	66.667	Panthera_tigris_altaica
ENSJJAG00000016178	Rtca	100	63.852	ENSPTRG00000001004	RTCA	100	63.852	Pan_troglodytes
ENSJJAG00000016178	Rtca	100	66.667	ENSPANG00000000346	RTCA	100	66.667	Papio_anubis
ENSJJAG00000016178	Rtca	100	53.151	ENSPKIG00000001653	rtca	100	53.151	Paramormyrops_kingsleyae
ENSJJAG00000016178	Rtca	100	60.656	ENSPSIG00000011408	RTCA	100	60.656	Pelodiscus_sinensis
ENSJJAG00000016178	Rtca	100	67.760	ENSPEMG00000018582	Rtca	100	67.760	Peromyscus_maniculatus_bairdii
ENSJJAG00000016178	Rtca	100	43.597	ENSPMAG00000009110	rtca	100	43.597	Petromyzon_marinus
ENSJJAG00000016178	Rtca	100	64.754	ENSPCIG00000007684	RTCA	100	64.754	Phascolarctos_cinereus
ENSJJAG00000016178	Rtca	100	52.186	ENSPFOG00000004824	rtca	100	52.186	Poecilia_formosa
ENSJJAG00000016178	Rtca	100	52.329	ENSPLAG00000011753	rtca	99	52.329	Poecilia_latipinna
ENSJJAG00000016178	Rtca	100	52.329	ENSPMEG00000020469	rtca	99	52.329	Poecilia_mexicana
ENSJJAG00000016178	Rtca	100	53.151	ENSPREG00000001365	rtca	99	53.151	Poecilia_reticulata
ENSJJAG00000016178	Rtca	100	66.393	ENSPPYG00000001115	RTCA	100	66.393	Pongo_abelii
ENSJJAG00000016178	Rtca	100	64.481	ENSPCAG00000005076	RTCA	100	64.481	Procavia_capensis
ENSJJAG00000016178	Rtca	100	67.486	ENSPCOG00000005603	RTCA	92	95.833	Propithecus_coquereli
ENSJJAG00000016178	Rtca	100	64.644	ENSPVAG00000009478	RTCA	100	64.644	Pteropus_vampyrus
ENSJJAG00000016178	Rtca	100	51.233	ENSPNYG00000004722	rtca	99	51.233	Pundamilia_nyererei
ENSJJAG00000016178	Rtca	100	51.781	ENSPNAG00000022270	rtca	100	51.781	Pygocentrus_nattereri
ENSJJAG00000016178	Rtca	100	67.760	ENSRNOG00000014575	Rtca	100	67.760	Rattus_norvegicus
ENSJJAG00000016178	Rtca	100	64.116	ENSRBIG00000041180	RTCA	100	64.116	Rhinopithecus_bieti
ENSJJAG00000016178	Rtca	100	66.393	ENSRROG00000024929	RTCA	100	66.393	Rhinopithecus_roxellana
ENSJJAG00000016178	Rtca	100	65.301	ENSSBOG00000028626	RTCA	100	65.301	Saimiri_boliviensis_boliviensis
ENSJJAG00000016178	Rtca	100	64.754	ENSSHAG00000001758	RTCA	100	64.754	Sarcophilus_harrisii
ENSJJAG00000016178	Rtca	98	50.696	ENSSMAG00000014680	rtca	97	50.696	Scophthalmus_maximus
ENSJJAG00000016178	Rtca	98	50.696	ENSSDUG00000015585	rtca	97	50.696	Seriola_dumerili
ENSJJAG00000016178	Rtca	95	51.143	ENSSLDG00000018985	rtca	95	51.143	Seriola_lalandi_dorsalis
ENSJJAG00000016178	Rtca	83	60.252	ENSSARG00000013993	RTCA	100	60.883	Sorex_araneus
ENSJJAG00000016178	Rtca	100	50.959	ENSSPAG00000011938	rtca	99	50.959	Stegastes_partitus
ENSJJAG00000016178	Rtca	100	67.760	ENSSSCG00000006865	RTCA	100	67.760	Sus_scrofa
ENSJJAG00000016178	Rtca	100	59.836	ENSTGUG00000005154	RTCA	100	59.836	Taeniopygia_guttata
ENSJJAG00000016178	Rtca	100	51.781	ENSTRUG00000008799	rtca	100	51.781	Takifugu_rubripes
ENSJJAG00000016178	Rtca	100	52.603	ENSTNIG00000004725	rtca	100	52.603	Tetraodon_nigroviridis
ENSJJAG00000016178	Rtca	73	76.364	ENSTBEG00000000943	RTCA	61	76.364	Tupaia_belangeri
ENSJJAG00000016178	Rtca	100	64.908	ENSTTRG00000015327	RTCA	100	64.908	Tursiops_truncatus
ENSJJAG00000016178	Rtca	92	64.140	ENSUAMG00000017265	RTCA	96	64.140	Ursus_americanus
ENSJJAG00000016178	Rtca	100	66.393	ENSUMAG00000007881	RTCA	100	66.393	Ursus_maritimus
ENSJJAG00000016178	Rtca	83	52.532	ENSVPAG00000001039	RTCA	84	52.532	Vicugna_pacos
ENSJJAG00000016178	Rtca	100	66.393	ENSVVUG00000022041	RTCA	68	66.393	Vulpes_vulpes
ENSJJAG00000016178	Rtca	98	47.397	ENSXETG00000031661	RTCA	99	50.000	Xenopus_tropicalis
ENSJJAG00000016178	Rtca	100	45.299	ENSXCOG00000008002	rtca	100	45.299	Xiphophorus_couchianus
ENSJJAG00000016178	Rtca	100	52.603	ENSXMAG00000005482	rtca	99	52.603	Xiphophorus_maculatus