EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000016355 (Gene tree)
Gene ID: 101617886
Gene Symbol: Gfi1b
Alias: Gfi-1B
Full Name: growth factor independent 1B transcriptional repressor
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 4034 bases
Position: chrJH725449.1:29054580-29058613
Accession: 101617886
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000013683	zf-C2H2	PF00096.26	1.7e-27	1	5
ENSJJAP00000013683	zf-C2H2	PF00096.26	1.7e-27	2	5
ENSJJAP00000013683	zf-C2H2	PF00096.26	1.7e-27	3	5
ENSJJAP00000013683	zf-C2H2	PF00096.26	1.7e-27	4	5
ENSJJAP00000013683	zf-C2H2	PF00096.26	1.7e-27	5	5
ENSJJAP00000013683	zf-met	PF12874.7	9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000020176	-	1101	XM_004654042	ENSJJAP00000013683	365 (aa)	XP_004654099	-

Gene Model

Click here to download ENSJJAG00000016355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000016355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000016355	Gfi1b	60	41.333	ENSJJAG00000021785	Zfp574	54	36.239
ENSJJAG00000016355	Gfi1b	54	45.570	ENSJJAG00000011934	Zfp865	75	41.379
ENSJJAG00000016355	Gfi1b	57	40.196	ENSJJAG00000024260	-	67	40.196
ENSJJAG00000016355	Gfi1b	53	41.935	ENSJJAG00000015468	-	68	41.935
ENSJJAG00000016355	Gfi1b	64	36.893	ENSJJAG00000000816	Zfp319	83	36.893
ENSJJAG00000016355	Gfi1b	53	32.308	ENSJJAG00000018599	Zfp784	64	31.841
ENSJJAG00000016355	Gfi1b	61	36.364	ENSJJAG00000018925	Zfp39	60	36.364
ENSJJAG00000016355	Gfi1b	56	39.815	ENSJJAG00000019934	Snai3	59	39.815
ENSJJAG00000016355	Gfi1b	57	50.000	ENSJJAG00000003567	Zfp768	50	50.588
ENSJJAG00000016355	Gfi1b	55	37.647	ENSJJAG00000017317	Snai1	73	37.037
ENSJJAG00000016355	Gfi1b	65	38.596	ENSJJAG00000021900	-	74	38.596
ENSJJAG00000016355	Gfi1b	59	44.578	ENSJJAG00000000983	Zfp628	63	44.578
ENSJJAG00000016355	Gfi1b	69	38.462	ENSJJAG00000019328	Zfp423	68	39.474
ENSJJAG00000016355	Gfi1b	57	35.519	ENSJJAG00000004576	-	50	35.519
ENSJJAG00000016355	Gfi1b	56	35.849	ENSJJAG00000023435	Zfp597	64	35.849
ENSJJAG00000016355	Gfi1b	55	90.351	ENSJJAG00000022622	-	100	90.351
ENSJJAG00000016355	Gfi1b	57	36.747	ENSJJAG00000023633	Zfp672	92	35.784
ENSJJAG00000016355	Gfi1b	60	44.860	ENSJJAG00000011464	Prdm5	88	35.567
ENSJJAG00000016355	Gfi1b	60	37.705	ENSJJAG00000020082	-	78	38.974
ENSJJAG00000016355	Gfi1b	60	46.154	ENSJJAG00000019878	Zfp1	68	46.154
ENSJJAG00000016355	Gfi1b	53	34.959	ENSJJAG00000017495	-	54	34.959
ENSJJAG00000016355	Gfi1b	61	42.857	ENSJJAG00000017493	Zfp236	59	42.857
ENSJJAG00000016355	Gfi1b	55	42.342	ENSJJAG00000020922	-	77	42.342
ENSJJAG00000016355	Gfi1b	66	36.158	ENSJJAG00000012972	Zfp709	75	36.158
ENSJJAG00000016355	Gfi1b	56	41.026	ENSJJAG00000014350	Zfp961	72	41.026
ENSJJAG00000016355	Gfi1b	56	37.113	ENSJJAG00000014531	Zfp661	58	37.113
ENSJJAG00000016355	Gfi1b	60	40.625	ENSJJAG00000013954	Zfp64	70	40.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000016355	Gfi1b	100	52.861	ENSAPOG00000001296	gfi1b	99	52.861	Acanthochromis_polyacanthus
ENSJJAG00000016355	Gfi1b	100	50.954	ENSACIG00000002190	gfi1b	99	50.954	Amphilophus_citrinellus
ENSJJAG00000016355	Gfi1b	100	53.388	ENSAOCG00000021187	gfi1b	99	53.388	Amphiprion_ocellaris
ENSJJAG00000016355	Gfi1b	100	52.632	ENSAPEG00000016196	gfi1b	99	52.632	Amphiprion_percula
ENSJJAG00000016355	Gfi1b	100	54.301	ENSATEG00000002534	gfi1b	99	54.301	Anabas_testudineus
ENSJJAG00000016355	Gfi1b	100	62.834	ENSAPLG00000003373	GFI1B	99	62.834	Anas_platyrhynchos
ENSJJAG00000016355	Gfi1b	100	49.867	ENSACLG00000027053	gfi1b	99	49.867	Astatotilapia_calliptera
ENSJJAG00000016355	Gfi1b	100	56.649	ENSAMXG00000037544	GFI1B	99	56.649	Astyanax_mexicanus
ENSJJAG00000016355	Gfi1b	100	81.370	ENSCAPG00000010404	GFI1B	99	81.370	Cavia_aperea
ENSJJAG00000016355	Gfi1b	100	64.567	ENSCPBG00000021186	GFI1B	99	64.567	Chrysemys_picta_bellii
ENSJJAG00000016355	Gfi1b	100	50.529	ENSCSEG00000001315	gfi1b	99	50.529	Cynoglossus_semilaevis
ENSJJAG00000016355	Gfi1b	100	51.872	ENSCVAG00000017168	gfi1b	99	51.872	Cyprinodon_variegatus
ENSJJAG00000016355	Gfi1b	100	55.759	ENSDARG00000079947	gfi1b	99	66.296	Danio_rerio
ENSJJAG00000016355	Gfi1b	61	98.276	ENSEEUG00000012609	-	75	98.276	Erinaceus_europaeus
ENSJJAG00000016355	Gfi1b	100	53.806	ENSELUG00000016933	gfi1b	99	53.806	Esox_lucius
ENSJJAG00000016355	Gfi1b	100	65.867	ENSFALG00000001479	GFI1B	99	65.867	Ficedula_albicollis
ENSJJAG00000016355	Gfi1b	100	53.457	ENSFHEG00000015138	gfi1b	99	53.457	Fundulus_heteroclitus
ENSJJAG00000016355	Gfi1b	74	64.130	ENSGMOG00000019123	gfi1b	88	64.130	Gadus_morhua
ENSJJAG00000016355	Gfi1b	100	63.200	ENSGALG00000003478	GFI1B	99	63.200	Gallus_gallus
ENSJJAG00000016355	Gfi1b	74	61.993	ENSGAFG00000003059	gfi1b	100	61.993	Gambusia_affinis
ENSJJAG00000016355	Gfi1b	100	51.680	ENSGACG00000018134	gfi1b	99	51.680	Gasterosteus_aculeatus
ENSJJAG00000016355	Gfi1b	100	65.768	ENSGAGG00000021327	GFI1B	99	65.768	Gopherus_agassizii
ENSJJAG00000016355	Gfi1b	100	49.867	ENSHBUG00000005451	gfi1b	99	49.867	Haplochromis_burtoni
ENSJJAG00000016355	Gfi1b	100	53.723	ENSHCOG00000013713	gfi1b	99	55.041	Hippocampus_comes
ENSJJAG00000016355	Gfi1b	100	55.291	ENSIPUG00000012769	gfi1b	99	55.291	Ictalurus_punctatus
ENSJJAG00000016355	Gfi1b	100	53.619	ENSKMAG00000016047	gfi1b	99	53.619	Kryptolebias_marmoratus
ENSJJAG00000016355	Gfi1b	100	53.261	ENSLBEG00000020297	gfi1b	99	53.261	Labrus_bergylta
ENSJJAG00000016355	Gfi1b	100	55.707	ENSLACG00000012207	GFI1B	99	55.707	Latimeria_chalumnae
ENSJJAG00000016355	Gfi1b	100	56.383	ENSLOCG00000005750	gfi1b	99	56.383	Lepisosteus_oculatus
ENSJJAG00000016355	Gfi1b	100	78.356	ENSLAFG00000022367	GFI1B	99	78.356	Loxodonta_africana
ENSJJAG00000016355	Gfi1b	100	53.243	ENSMAMG00000003040	gfi1b	99	53.243	Mastacembelus_armatus
ENSJJAG00000016355	Gfi1b	99	50.000	ENSMZEG00005015594	gfi1b	99	50.000	Maylandia_zebra
ENSJJAG00000016355	Gfi1b	100	62.667	ENSMGAG00000006129	GFI1B	99	62.667	Meleagris_gallopavo
ENSJJAG00000016355	Gfi1b	100	54.496	ENSMMOG00000011764	gfi1b	99	54.496	Mola_mola
ENSJJAG00000016355	Gfi1b	100	70.765	ENSMODG00000012600	GFI1B	99	70.765	Monodelphis_domestica
ENSJJAG00000016355	Gfi1b	100	53.158	ENSMALG00000004034	gfi1b	99	53.158	Monopterus_albus
ENSJJAG00000016355	Gfi1b	100	86.575	ENSNGAG00000003333	Gfi1b	100	86.575	Nannospalax_galili
ENSJJAG00000016355	Gfi1b	100	50.663	ENSNBRG00000012391	gfi1b	99	50.663	Neolamprologus_brichardi
ENSJJAG00000016355	Gfi1b	100	50.398	ENSONIG00000013011	gfi1b	100	69.340	Oreochromis_niloticus
ENSJJAG00000016355	Gfi1b	100	64.384	ENSOANG00000014723	GFI1B	99	64.384	Ornithorhynchus_anatinus
ENSJJAG00000016355	Gfi1b	100	90.265	ENSORLG00000014390	GFI1B	95	45.652	Oryzias_latipes
ENSJJAG00000016355	Gfi1b	100	52.973	ENSORLG00020003719	GFI1B	99	52.973	Oryzias_latipes_hni
ENSJJAG00000016355	Gfi1b	100	52.973	ENSORLG00015017142	gfi1b	99	52.973	Oryzias_latipes_hsok
ENSJJAG00000016355	Gfi1b	100	54.076	ENSOMEG00000015149	GFI1B	99	54.076	Oryzias_melastigma
ENSJJAG00000016355	Gfi1b	100	75.890	ENSOGAG00000008879	GFI1B	99	75.890	Otolemur_garnettii
ENSJJAG00000016355	Gfi1b	100	55.438	ENSPKIG00000007643	gfi1b	99	55.438	Paramormyrops_kingsleyae
ENSJJAG00000016355	Gfi1b	100	65.092	ENSPSIG00000012112	GFI1B	99	65.092	Pelodiscus_sinensis
ENSJJAG00000016355	Gfi1b	99	52.151	ENSPMGG00000006021	gfi1b	99	52.688	Periophthalmus_magnuspinnatus
ENSJJAG00000016355	Gfi1b	100	72.087	ENSPCIG00000019724	GFI1B	99	72.087	Phascolarctos_cinereus
ENSJJAG00000016355	Gfi1b	100	52.368	ENSPFOG00000003460	gfi1b	99	52.368	Poecilia_formosa
ENSJJAG00000016355	Gfi1b	100	52.785	ENSPLAG00000021960	GFI1B	99	52.785	Poecilia_latipinna
ENSJJAG00000016355	Gfi1b	100	52.368	ENSPLAG00000017181	GFI1B	99	52.368	Poecilia_latipinna
ENSJJAG00000016355	Gfi1b	100	52.785	ENSPMEG00000001556	GFI1B	99	52.785	Poecilia_mexicana
ENSJJAG00000016355	Gfi1b	100	52.785	ENSPMEG00000019220	gfi1b	99	52.785	Poecilia_mexicana
ENSJJAG00000016355	Gfi1b	100	53.050	ENSPREG00000021718	gfi1b	99	53.050	Poecilia_reticulata
ENSJJAG00000016355	Gfi1b	74	59.140	ENSPNYG00000018422	gfi1b	76	59.140	Pundamilia_nyererei
ENSJJAG00000016355	Gfi1b	100	55.291	ENSPNAG00000021118	gfi1b	99	55.291	Pygocentrus_nattereri
ENSJJAG00000016355	Gfi1b	100	67.030	ENSSHAG00000006462	GFI1B	99	67.030	Sarcophilus_harrisii
ENSJJAG00000016355	Gfi1b	98	48.765	ENSSFOG00015011566	gfi1b	89	48.765	Scleropages_formosus
ENSJJAG00000016355	Gfi1b	100	52.231	ENSSMAG00000015181	gfi1b	99	51.451	Scophthalmus_maximus
ENSJJAG00000016355	Gfi1b	100	53.226	ENSSDUG00000011604	gfi1b	99	53.226	Seriola_dumerili
ENSJJAG00000016355	Gfi1b	100	54.032	ENSSLDG00000013823	gfi1b	99	54.032	Seriola_lalandi_dorsalis
ENSJJAG00000016355	Gfi1b	100	55.733	ENSSPUG00000016039	GFI1B	99	55.733	Sphenodon_punctatus
ENSJJAG00000016355	Gfi1b	100	51.571	ENSSPAG00000022914	gfi1b	99	51.571	Stegastes_partitus
ENSJJAG00000016355	Gfi1b	58	62.651	ENSTGUG00000015953	-	86	62.651	Taeniopygia_guttata
ENSJJAG00000016355	Gfi1b	55	94.737	ENSTGUG00000005282	-	100	94.737	Taeniopygia_guttata
ENSJJAG00000016355	Gfi1b	100	54.324	ENSTRUG00000004525	gfi1b	99	54.324	Takifugu_rubripes
ENSJJAG00000016355	Gfi1b	100	53.908	ENSTNIG00000003834	gfi1b	99	53.908	Tetraodon_nigroviridis
ENSJJAG00000016355	Gfi1b	89	96.552	ENSTBEG00000014459	GFI1B	83	96.552	Tupaia_belangeri
ENSJJAG00000016355	Gfi1b	100	57.527	ENSXETG00000006263	gfi1b	99	58.556	Xenopus_tropicalis
ENSJJAG00000016355	Gfi1b	100	53.316	ENSXMAG00000027589	gfi1b	99	53.316	Xiphophorus_maculatus