EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000016400 (Gene tree)
Gene ID: -
Gene Symbol: Srl
Alias: 9830004M20Rik|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 57736 bases
Position: chrJH725443.1:4303484-4361219
Accession: 2146620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000013745	MMR_HSR1	PF01926.23	8.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000020238	-	1419	-	ENSJJAP00000013745	472 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000016400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000016400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000016400	Srl	79	32.708	ENSJJAG00000013415	Ehd3	67	33.875
ENSJJAG00000016400	Srl	82	32.391	ENSJJAG00000008621	Ehd2	65	33.978
ENSJJAG00000016400	Srl	77	33.973	ENSJJAG00000022299	Ehd1	67	33.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000016400	Srl	100	95.349	ENSG00000185739	SRL	100	97.448	Homo_sapiens
ENSJJAG00000016400	Srl	94	76.018	ENSAPOG00000012432	SRL	98	74.887	Acanthochromis_polyacanthus
ENSJJAG00000016400	Srl	100	81.780	ENSAPOG00000018093	srl	100	84.009	Acanthochromis_polyacanthus
ENSJJAG00000016400	Srl	98	96.104	ENSAMEG00000010862	SRL	52	96.104	Ailuropoda_melanoleuca
ENSJJAG00000016400	Srl	94	74.775	ENSACIG00000015419	SRL	99	74.775	Amphilophus_citrinellus
ENSJJAG00000016400	Srl	96	83.407	ENSACIG00000015799	srl	99	83.407	Amphilophus_citrinellus
ENSJJAG00000016400	Srl	92	84.758	ENSAOCG00000007574	srl	99	84.758	Amphiprion_ocellaris
ENSJJAG00000016400	Srl	96	74.342	ENSAOCG00000017049	SRL	99	73.913	Amphiprion_ocellaris
ENSJJAG00000016400	Srl	96	70.330	ENSAPEG00000006533	SRL	99	69.481	Amphiprion_percula
ENSJJAG00000016400	Srl	100	81.992	ENSAPEG00000006911	srl	100	81.992	Amphiprion_percula
ENSJJAG00000016400	Srl	100	81.780	ENSATEG00000024315	srl	100	81.780	Anabas_testudineus
ENSJJAG00000016400	Srl	94	73.626	ENSATEG00000009643	SRL	52	72.967	Anabas_testudineus
ENSJJAG00000016400	Srl	100	86.475	ENSACAG00000016380	SRL	89	86.885	Anolis_carolinensis
ENSJJAG00000016400	Srl	94	72.747	ENSACLG00000024674	SRL	57	72.967	Astatotilapia_calliptera
ENSJJAG00000016400	Srl	98	82.581	ENSACLG00000027685	srl	99	82.581	Astatotilapia_calliptera
ENSJJAG00000016400	Srl	99	80.042	ENSAMXG00000018789	srl	92	80.042	Astyanax_mexicanus
ENSJJAG00000016400	Srl	88	78.313	ENSAMXG00000038693	SRL	100	73.510	Astyanax_mexicanus
ENSJJAG00000016400	Srl	96	96.468	ENSBTAG00000001078	SRL	57	96.468	Bos_taurus
ENSJJAG00000016400	Srl	94	97.065	ENSCJAG00000019750	SRL	100	95.349	Callithrix_jacchus
ENSJJAG00000016400	Srl	97	96.304	ENSCAFG00000019233	SRL	84	97.124	Canis_familiaris
ENSJJAG00000016400	Srl	96	96.703	ENSCAFG00020025024	SRL	56	96.703	Canis_lupus_dingo
ENSJJAG00000016400	Srl	99	95.269	ENSCHIG00000017927	SRL	57	96.468	Capra_hircus
ENSJJAG00000016400	Srl	100	96.195	ENSTSYG00000007919	SRL	100	98.376	Carlito_syrichta
ENSJJAG00000016400	Srl	100	97.669	ENSCPOG00000012643	SRL	100	97.669	Cavia_porcellus
ENSJJAG00000016400	Srl	94	90.745	ENSCCAG00000032646	SRL	100	97.361	Cebus_capucinus
ENSJJAG00000016400	Srl	96	96.681	ENSCATG00000032227	-	100	95.560	Cercocebus_atys
ENSJJAG00000016400	Srl	100	97.458	ENSCLAG00000016242	SRL	100	97.458	Chinchilla_lanigera
ENSJJAG00000016400	Srl	82	96.364	ENSCHOG00000001618	SRL	52	96.364	Choloepus_hoffmanni
ENSJJAG00000016400	Srl	96	92.746	ENSCPBG00000026371	SRL	99	87.397	Chrysemys_picta_bellii
ENSJJAG00000016400	Srl	88	60.337	ENSCING00000005231	-	91	60.591	Ciona_intestinalis
ENSJJAG00000016400	Srl	96	96.681	ENSCANG00000035872	SRL	100	97.448	Colobus_angolensis_palliatus
ENSJJAG00000016400	Srl	100	97.881	ENSCGRG00001016630	Srl	100	97.881	Cricetulus_griseus_chok1gshd
ENSJJAG00000016400	Srl	100	97.881	ENSCGRG00000005458	Srl	100	97.881	Cricetulus_griseus_crigri
ENSJJAG00000016400	Srl	99	70.190	ENSCSEG00000011866	SRL	94	70.236	Cynoglossus_semilaevis
ENSJJAG00000016400	Srl	100	81.992	ENSCSEG00000016151	srl	100	81.992	Cynoglossus_semilaevis
ENSJJAG00000016400	Srl	100	81.568	ENSCVAG00000003513	srl	100	81.568	Cyprinodon_variegatus
ENSJJAG00000016400	Srl	94	75.442	ENSCVAG00000022465	SRL	60	74.558	Cyprinodon_variegatus
ENSJJAG00000016400	Srl	100	82.203	ENSDARG00000104587	srl	100	82.203	Danio_rerio
ENSJJAG00000016400	Srl	80	76.823	ENSDARG00000112959	CABZ01072309.1	90	82.849	Danio_rerio
ENSJJAG00000016400	Srl	96	96.009	ENSDNOG00000011643	SRL	54	95.815	Dasypus_novemcinctus
ENSJJAG00000016400	Srl	100	97.458	ENSDORG00000014807	Srl	100	97.458	Dipodomys_ordii
ENSJJAG00000016400	Srl	75	67.787	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSJJAG00000016400	Srl	96	96.026	ENSEASG00005000942	SRL	55	96.026	Equus_asinus_asinus
ENSJJAG00000016400	Srl	99	95.127	ENSECAG00000024219	SRL	99	95.127	Equus_caballus
ENSJJAG00000016400	Srl	100	77.823	ENSELUG00000015616	srl	100	77.823	Esox_lucius
ENSJJAG00000016400	Srl	100	94.503	ENSFCAG00000022075	SRL	100	95.560	Felis_catus
ENSJJAG00000016400	Srl	96	90.066	ENSFALG00000004328	SRL	64	90.466	Ficedula_albicollis
ENSJJAG00000016400	Srl	100	97.669	ENSFDAG00000006199	SRL	100	97.669	Fukomys_damarensis
ENSJJAG00000016400	Srl	94	75.792	ENSFHEG00000011854	SRL	98	76.471	Fundulus_heteroclitus
ENSJJAG00000016400	Srl	100	81.144	ENSFHEG00000011239	srl	100	81.144	Fundulus_heteroclitus
ENSJJAG00000016400	Srl	93	81.015	ENSGMOG00000014954	srl	99	81.015	Gadus_morhua
ENSJJAG00000016400	Srl	99	88.747	ENSGALG00000038884	SRL	99	88.747	Gallus_gallus
ENSJJAG00000016400	Srl	100	81.144	ENSGAFG00000000010	srl	100	81.144	Gambusia_affinis
ENSJJAG00000016400	Srl	94	77.149	ENSGAFG00000016984	SRL	98	76.018	Gambusia_affinis
ENSJJAG00000016400	Srl	93	82.119	ENSGACG00000011332	srl	99	82.119	Gasterosteus_aculeatus
ENSJJAG00000016400	Srl	100	95.137	ENSGGOG00000011312	-	100	95.137	Gorilla_gorilla
ENSJJAG00000016400	Srl	94	72.527	ENSHBUG00000015710	SRL	57	72.747	Haplochromis_burtoni
ENSJJAG00000016400	Srl	98	82.581	ENSHBUG00000007581	srl	99	82.581	Haplochromis_burtoni
ENSJJAG00000016400	Srl	100	97.881	ENSHGLG00000015271	SRL	100	97.881	Heterocephalus_glaber_female
ENSJJAG00000016400	Srl	100	97.881	ENSHGLG00100019378	SRL	100	97.881	Heterocephalus_glaber_male
ENSJJAG00000016400	Srl	94	72.627	ENSHCOG00000001012	SRL	50	71.523	Hippocampus_comes
ENSJJAG00000016400	Srl	100	80.127	ENSHCOG00000008687	srl	98	83.258	Hippocampus_comes
ENSJJAG00000016400	Srl	100	79.873	ENSIPUG00000012513	srl	100	79.873	Ictalurus_punctatus
ENSJJAG00000016400	Srl	92	70.872	ENSIPUG00000011609	SRL	95	69.725	Ictalurus_punctatus
ENSJJAG00000016400	Srl	100	97.669	ENSSTOG00000021151	-	100	97.669	Ictidomys_tridecemlineatus
ENSJJAG00000016400	Srl	93	75.964	ENSKMAG00000019537	SRL	100	75.964	Kryptolebias_marmoratus
ENSJJAG00000016400	Srl	98	81.818	ENSKMAG00000014115	srl	93	85.511	Kryptolebias_marmoratus
ENSJJAG00000016400	Srl	96	74.123	ENSLBEG00000013811	SRL	98	74.123	Labrus_bergylta
ENSJJAG00000016400	Srl	100	81.780	ENSLBEG00000026643	srl	100	81.780	Labrus_bergylta
ENSJJAG00000016400	Srl	96	86.283	ENSLACG00000002825	SRL	99	86.283	Latimeria_chalumnae
ENSJJAG00000016400	Srl	99	82.833	ENSLOCG00000002644	srl	99	82.833	Lepisosteus_oculatus
ENSJJAG00000016400	Srl	96	96.460	ENSLAFG00000006329	SRL	51	96.460	Loxodonta_africana
ENSJJAG00000016400	Srl	91	97.448	ENSMFAG00000037383	SRL	100	97.448	Macaca_fascicularis
ENSJJAG00000016400	Srl	98	95.445	ENSMNEG00000019236	-	97	95.445	Macaca_nemestrina
ENSJJAG00000016400	Srl	96	88.496	ENSMLEG00000032156	SRL	100	87.738	Mandrillus_leucophaeus
ENSJJAG00000016400	Srl	94	84.389	ENSMAMG00000023322	srl	99	80.556	Mastacembelus_armatus
ENSJJAG00000016400	Srl	93	73.568	ENSMAMG00000013756	SRL	53	73.568	Mastacembelus_armatus
ENSJJAG00000016400	Srl	98	82.581	ENSMZEG00005004548	srl	99	82.581	Maylandia_zebra
ENSJJAG00000016400	Srl	94	72.747	ENSMZEG00005004010	SRL	57	72.967	Maylandia_zebra
ENSJJAG00000016400	Srl	96	90.466	ENSMGAG00000009342	SRL	95	92.287	Meleagris_gallopavo
ENSJJAG00000016400	Srl	100	94.715	ENSMICG00000032307	SRL	100	94.715	Microcebus_murinus
ENSJJAG00000016400	Srl	100	97.458	ENSMOCG00000008208	Srl	100	97.458	Microtus_ochrogaster
ENSJJAG00000016400	Srl	93	72.807	ENSMMOG00000021572	SRL	99	72.747	Mola_mola
ENSJJAG00000016400	Srl	94	84.163	ENSMMOG00000013970	srl	98	84.163	Mola_mola
ENSJJAG00000016400	Srl	96	96.026	ENSMODG00000016380	-	51	96.026	Monodelphis_domestica
ENSJJAG00000016400	Srl	89	75.895	ENSMALG00000000670	SRL	98	74.702	Monopterus_albus
ENSJJAG00000016400	Srl	100	81.395	ENSMALG00000005039	srl	98	83.484	Monopterus_albus
ENSJJAG00000016400	Srl	100	98.517	MGP_CAROLIEiJ_G0020400	Srl	100	98.517	Mus_caroli
ENSJJAG00000016400	Srl	100	98.517	ENSMUSG00000022519	Srl	100	98.517	Mus_musculus
ENSJJAG00000016400	Srl	100	98.517	MGP_SPRETEiJ_G0021294	Srl	100	98.517	Mus_spretus
ENSJJAG00000016400	Srl	96	96.903	ENSMPUG00000015025	SRL	55	96.903	Mustela_putorius_furo
ENSJJAG00000016400	Srl	98	95.228	ENSMLUG00000030733	SRL	58	95.228	Myotis_lucifugus
ENSJJAG00000016400	Srl	100	98.305	ENSNGAG00000019741	Srl	100	98.305	Nannospalax_galili
ENSJJAG00000016400	Srl	94	72.747	ENSNBRG00000002422	SRL	62	69.474	Neolamprologus_brichardi
ENSJJAG00000016400	Srl	98	82.581	ENSNBRG00000023775	srl	99	82.581	Neolamprologus_brichardi
ENSJJAG00000016400	Srl	100	88.795	ENSNLEG00000029051	SRL	100	88.795	Nomascus_leucogenys
ENSJJAG00000016400	Srl	97	90.000	ENSOPRG00000000477	-	54	90.000	Ochotona_princeps
ENSJJAG00000016400	Srl	100	97.034	ENSODEG00000013256	SRL	100	97.034	Octodon_degus
ENSJJAG00000016400	Srl	99	81.104	ENSONIG00000005192	srl	99	81.104	Oreochromis_niloticus
ENSJJAG00000016400	Srl	97	95.870	ENSOCUG00000025140	SRL	51	95.870	Oryctolagus_cuniculus
ENSJJAG00000016400	Srl	96	74.723	ENSORLG00000015064	SRL	98	74.723	Oryzias_latipes
ENSJJAG00000016400	Srl	100	80.720	ENSORLG00000008291	srl	97	80.720	Oryzias_latipes
ENSJJAG00000016400	Srl	96	74.945	ENSORLG00020018173	SRL	98	74.945	Oryzias_latipes_hni
ENSJJAG00000016400	Srl	100	80.932	ENSORLG00020019784	srl	85	80.932	Oryzias_latipes_hni
ENSJJAG00000016400	Srl	96	74.945	ENSORLG00015019063	SRL	98	74.945	Oryzias_latipes_hsok
ENSJJAG00000016400	Srl	100	80.508	ENSORLG00015009342	srl	97	80.508	Oryzias_latipes_hsok
ENSJJAG00000016400	Srl	94	73.304	ENSOMEG00000005682	SRL	53	73.626	Oryzias_melastigma
ENSJJAG00000016400	Srl	100	80.720	ENSOMEG00000010006	srl	98	83.409	Oryzias_melastigma
ENSJJAG00000016400	Srl	96	95.815	ENSOGAG00000029266	SRL	55	95.815	Otolemur_garnettii
ENSJJAG00000016400	Srl	99	95.269	ENSOARG00000003074	SRL	58	95.269	Ovis_aries
ENSJJAG00000016400	Srl	97	96.288	ENSPPAG00000024919	-	100	97.448	Pan_paniscus
ENSJJAG00000016400	Srl	100	94.715	ENSPPRG00000010274	SRL	100	98.144	Panthera_pardus
ENSJJAG00000016400	Srl	100	94.715	ENSPTIG00000015162	SRL	100	98.144	Panthera_tigris_altaica
ENSJJAG00000016400	Srl	100	95.349	ENSPTRG00000007712	SRL	100	97.448	Pan_troglodytes
ENSJJAG00000016400	Srl	98	95.662	ENSPANG00000013804	SRL	99	95.662	Papio_anubis
ENSJJAG00000016400	Srl	100	80.973	ENSPKIG00000006405	srl	100	80.973	Paramormyrops_kingsleyae
ENSJJAG00000016400	Srl	100	73.729	ENSPKIG00000024974	SRL	94	73.729	Paramormyrops_kingsleyae
ENSJJAG00000016400	Srl	96	90.529	ENSPSIG00000008586	SRL	51	90.529	Pelodiscus_sinensis
ENSJJAG00000016400	Srl	96	83.444	ENSPMGG00000021081	srl	97	83.444	Periophthalmus_magnuspinnatus
ENSJJAG00000016400	Srl	94	73.077	ENSPMGG00000023505	-	99	72.851	Periophthalmus_magnuspinnatus
ENSJJAG00000016400	Srl	100	97.881	ENSPEMG00000015842	Srl	100	97.881	Peromyscus_maniculatus_bairdii
ENSJJAG00000016400	Srl	89	67.890	ENSPMAG00000004786	srl	99	67.661	Petromyzon_marinus
ENSJJAG00000016400	Srl	96	95.344	ENSPCIG00000012128	SRL	98	95.344	Phascolarctos_cinereus
ENSJJAG00000016400	Srl	100	79.545	ENSPFOG00000011408	srl	98	79.332	Poecilia_formosa
ENSJJAG00000016400	Srl	97	82.135	ENSPLAG00000008017	srl	99	82.135	Poecilia_latipinna
ENSJJAG00000016400	Srl	94	76.244	ENSPLAG00000002932	SRL	98	75.113	Poecilia_latipinna
ENSJJAG00000016400	Srl	94	73.961	ENSPMEG00000005890	SRL	59	72.867	Poecilia_mexicana
ENSJJAG00000016400	Srl	100	81.356	ENSPMEG00000006745	srl	99	82.135	Poecilia_mexicana
ENSJJAG00000016400	Srl	100	80.932	ENSPREG00000007751	srl	99	83.596	Poecilia_reticulata
ENSJJAG00000016400	Srl	94	77.376	ENSPREG00000000315	SRL	98	76.244	Poecilia_reticulata
ENSJJAG00000016400	Srl	89	97.613	ENSPPYG00000007053	SRL	98	97.613	Pongo_abelii
ENSJJAG00000016400	Srl	96	94.923	ENSPCAG00000003378	-	51	94.923	Procavia_capensis
ENSJJAG00000016400	Srl	100	94.715	ENSPCOG00000023135	SRL	100	97.216	Propithecus_coquereli
ENSJJAG00000016400	Srl	96	97.566	ENSPVAG00000006586	SRL	56	97.566	Pteropus_vampyrus
ENSJJAG00000016400	Srl	94	72.747	ENSPNYG00000003423	SRL	57	72.967	Pundamilia_nyererei
ENSJJAG00000016400	Srl	98	82.581	ENSPNYG00000001200	srl	99	82.581	Pundamilia_nyererei
ENSJJAG00000016400	Srl	99	72.458	ENSPNAG00000007361	-	97	72.458	Pygocentrus_nattereri
ENSJJAG00000016400	Srl	100	78.814	ENSPNAG00000023106	srl	100	78.814	Pygocentrus_nattereri
ENSJJAG00000016400	Srl	97	97.162	ENSRNOG00000005269	Srl	51	97.162	Rattus_norvegicus
ENSJJAG00000016400	Srl	97	95.435	ENSRBIG00000042358	SRL	51	95.435	Rhinopithecus_bieti
ENSJJAG00000016400	Srl	94	97.065	ENSSBOG00000029273	SRL	100	95.349	Saimiri_boliviensis_boliviensis
ENSJJAG00000016400	Srl	97	95.833	ENSSHAG00000011715	-	51	96.674	Sarcophilus_harrisii
ENSJJAG00000016400	Srl	100	78.926	ENSSFOG00015009773	srl	99	80.932	Scleropages_formosus
ENSJJAG00000016400	Srl	94	76.244	ENSSFOG00015021327	SRL	51	74.672	Scleropages_formosus
ENSJJAG00000016400	Srl	100	81.395	ENSSMAG00000016274	srl	100	81.395	Scophthalmus_maximus
ENSJJAG00000016400	Srl	93	73.085	ENSSMAG00000002232	SRL	50	71.868	Scophthalmus_maximus
ENSJJAG00000016400	Srl	94	84.842	ENSSDUG00000010808	srl	97	84.842	Seriola_dumerili
ENSJJAG00000016400	Srl	94	74.833	ENSSDUG00000009161	SRL	98	74.833	Seriola_dumerili
ENSJJAG00000016400	Srl	94	74.398	ENSSLDG00000014601	SRL	99	73.742	Seriola_lalandi_dorsalis
ENSJJAG00000016400	Srl	96	83.664	ENSSLDG00000022024	srl	100	82.203	Seriola_lalandi_dorsalis
ENSJJAG00000016400	Srl	96	90.929	ENSSPUG00000016859	SRL	99	90.929	Sphenodon_punctatus
ENSJJAG00000016400	Srl	100	82.203	ENSSPAG00000019105	srl	100	82.203	Stegastes_partitus
ENSJJAG00000016400	Srl	93	76.190	ENSSPAG00000014254	SRL	98	75.057	Stegastes_partitus
ENSJJAG00000016400	Srl	96	96.247	ENSSSCG00000007949	SRL	99	96.652	Sus_scrofa
ENSJJAG00000016400	Srl	96	89.670	ENSTGUG00000003951	-	99	89.670	Taeniopygia_guttata
ENSJJAG00000016400	Srl	77	92.541	ENSTGUG00000016121	-	96	93.391	Taeniopygia_guttata
ENSJJAG00000016400	Srl	89	75.656	ENSTRUG00000013310	SRL	55	75.418	Takifugu_rubripes
ENSJJAG00000016400	Srl	100	81.780	ENSTRUG00000006005	srl	100	81.780	Takifugu_rubripes
ENSJJAG00000016400	Srl	96	82.379	ENSTNIG00000009739	srl	100	81.568	Tetraodon_nigroviridis
ENSJJAG00000016400	Srl	96	97.566	ENSUAMG00000005701	SRL	56	97.566	Ursus_americanus
ENSJJAG00000016400	Srl	96	97.345	ENSUMAG00000002574	SRL	56	97.345	Ursus_maritimus
ENSJJAG00000016400	Srl	96	96.916	ENSVVUG00000016331	-	50	96.916	Vulpes_vulpes
ENSJJAG00000016400	Srl	96	89.381	ENSXETG00000017313	srl	100	89.381	Xenopus_tropicalis
ENSJJAG00000016400	Srl	96	75.831	ENSXCOG00000014584	SRL	100	74.723	Xiphophorus_couchianus
ENSJJAG00000016400	Srl	89	85.036	ENSXCOG00000010424	srl	97	85.036	Xiphophorus_couchianus
ENSJJAG00000016400	Srl	94	74.286	ENSXMAG00000027598	SRL	62	74.286	Xiphophorus_maculatus
ENSJJAG00000016400	Srl	100	81.144	ENSXMAG00000004625	srl	95	81.144	Xiphophorus_maculatus