EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000016447 (Gene tree)
Gene ID: 101614737
Gene Symbol: Gfm1
Alias: D3Wsu133e
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 43772 bases
Position: chrJH725443.1:46492390-46536161
Accession: 101614737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000013823	GTP_EFTU	PF00009.27	2.2e-63	1	1
ENSJJAP00000013823	GTP_EFTU_D2	PF03144.25	5.4e-17	1	1
ENSJJAP00000013823	EFG_IV	PF03764.18	9.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000020317	-	2270	XM_004652394	ENSJJAP00000013823	751 (aa)	XP_004652451	UPI0003331CE2

Gene Model

Click here to download ENSJJAG00000016447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000016447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000016447	Gfm1	73	38.926	ENSJJAG00000017122	Eef2	74	38.926
ENSJJAG00000016447	Gfm1	59	32.639	ENSJJAG00000018268	Eftud2	53	32.639
ENSJJAG00000016447	Gfm1	92	35.270	ENSJJAG00000024278	Gfm2	91	35.408
ENSJJAG00000016447	Gfm1	52	33.173	ENSJJAG00000005872	Guf1	66	33.173

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000016447	Gfm1	98	91.168	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSJJAG00000016447	Gfm1	93	76.934	ENSAPOG00000016489	gfm1	99	76.934	Acanthochromis_polyacanthus
ENSJJAG00000016447	Gfm1	98	92.152	ENSAMEG00000013542	GFM1	100	91.645	Ailuropoda_melanoleuca
ENSJJAG00000016447	Gfm1	96	75.310	ENSACIG00000014465	gfm1	94	75.310	Amphilophus_citrinellus
ENSJJAG00000016447	Gfm1	99	77.212	ENSAOCG00000006023	gfm1	99	77.212	Amphiprion_ocellaris
ENSJJAG00000016447	Gfm1	99	77.212	ENSAPEG00000024499	gfm1	99	79.190	Amphiprion_percula
ENSJJAG00000016447	Gfm1	100	77.630	ENSATEG00000013789	gfm1	100	77.630	Anabas_testudineus
ENSJJAG00000016447	Gfm1	96	83.310	ENSAPLG00000005022	GFM1	100	83.310	Anas_platyrhynchos
ENSJJAG00000016447	Gfm1	97	81.843	ENSACAG00000006829	GFM1	98	81.843	Anolis_carolinensis
ENSJJAG00000016447	Gfm1	100	90.186	ENSANAG00000035983	GFM1	100	90.186	Aotus_nancymaae
ENSJJAG00000016447	Gfm1	97	80.690	ENSACLG00000016586	gfm1	99	79.505	Astatotilapia_calliptera
ENSJJAG00000016447	Gfm1	100	78.562	ENSAMXG00000013435	gfm1	97	80.579	Astyanax_mexicanus
ENSJJAG00000016447	Gfm1	100	92.165	ENSBTAG00000027795	GFM1	100	92.165	Bos_taurus
ENSJJAG00000016447	Gfm1	97	55.571	WBGene00009246	gfm-1	99	55.422	Caenorhabditis_elegans
ENSJJAG00000016447	Gfm1	100	90.451	ENSCJAG00000000363	GFM1	100	90.451	Callithrix_jacchus
ENSJJAG00000016447	Gfm1	98	92.328	ENSCAFG00000009006	GFM1	100	94.083	Canis_familiaris
ENSJJAG00000016447	Gfm1	98	92.828	ENSCAFG00020005878	GFM1	99	93.776	Canis_lupus_dingo
ENSJJAG00000016447	Gfm1	100	92.297	ENSCHIG00000015220	GFM1	100	92.297	Capra_hircus
ENSJJAG00000016447	Gfm1	100	92.563	ENSTSYG00000002013	GFM1	100	92.563	Carlito_syrichta
ENSJJAG00000016447	Gfm1	98	79.919	ENSCAPG00000005699	GFM1	99	79.919	Cavia_aperea
ENSJJAG00000016447	Gfm1	100	91.512	ENSCPOG00000001194	GFM1	100	91.512	Cavia_porcellus
ENSJJAG00000016447	Gfm1	100	90.053	ENSCCAG00000025561	GFM1	100	90.053	Cebus_capucinus
ENSJJAG00000016447	Gfm1	100	90.716	ENSCATG00000037622	GFM1	100	90.716	Cercocebus_atys
ENSJJAG00000016447	Gfm1	99	90.970	ENSCLAG00000002503	GFM1	100	90.331	Chinchilla_lanigera
ENSJJAG00000016447	Gfm1	100	90.584	ENSCSAG00000012162	GFM1	100	90.584	Chlorocebus_sabaeus
ENSJJAG00000016447	Gfm1	100	82.095	ENSCHOG00000004867	GFM1	100	82.095	Choloepus_hoffmanni
ENSJJAG00000016447	Gfm1	98	82.282	ENSCPBG00000018367	GFM1	99	82.282	Chrysemys_picta_bellii
ENSJJAG00000016447	Gfm1	99	57.763	ENSCING00000011960	-	99	57.763	Ciona_intestinalis
ENSJJAG00000016447	Gfm1	95	59.639	ENSCSAVG00000008514	-	99	59.639	Ciona_savignyi
ENSJJAG00000016447	Gfm1	98	91.712	ENSCANG00000031714	GFM1	100	90.849	Colobus_angolensis_palliatus
ENSJJAG00000016447	Gfm1	100	92.943	ENSCGRG00001022095	GFM1	100	92.943	Cricetulus_griseus_chok1gshd
ENSJJAG00000016447	Gfm1	100	92.943	ENSCGRG00000012043	GFM1	100	92.943	Cricetulus_griseus_crigri
ENSJJAG00000016447	Gfm1	96	75.905	ENSCSEG00000017088	gfm1	98	75.905	Cynoglossus_semilaevis
ENSJJAG00000016447	Gfm1	99	79.759	ENSCVAG00000004126	gfm1	99	80.563	Cyprinodon_variegatus
ENSJJAG00000016447	Gfm1	100	77.291	ENSDARG00000063624	gfm1	100	77.291	Danio_rerio
ENSJJAG00000016447	Gfm1	54	90.954	ENSDNOG00000016385	-	100	90.954	Dasypus_novemcinctus
ENSJJAG00000016447	Gfm1	100	90.160	ENSDORG00000014165	Gfm1	100	90.160	Dipodomys_ordii
ENSJJAG00000016447	Gfm1	94	67.278	FBgn0263133	mEFG1	95	67.278	Drosophila_melanogaster
ENSJJAG00000016447	Gfm1	98	81.646	ENSETEG00000019197	GFM1	100	81.349	Echinops_telfairi
ENSJJAG00000016447	Gfm1	90	65.875	ENSEBUG00000012794	gfm1	99	65.875	Eptatretus_burgeri
ENSJJAG00000016447	Gfm1	96	68.276	ENSEEUG00000000429	GFM1	99	68.276	Erinaceus_europaeus
ENSJJAG00000016447	Gfm1	100	75.899	ENSELUG00000014728	gfm1	100	75.899	Esox_lucius
ENSJJAG00000016447	Gfm1	98	93.369	ENSFCAG00000013291	GFM1	100	92.971	Felis_catus
ENSJJAG00000016447	Gfm1	90	83.111	ENSFALG00000007619	GFM1	100	83.111	Ficedula_albicollis
ENSJJAG00000016447	Gfm1	100	91.114	ENSFDAG00000016559	GFM1	100	91.114	Fukomys_damarensis
ENSJJAG00000016447	Gfm1	100	78.029	ENSFHEG00000006091	gfm1	100	78.029	Fundulus_heteroclitus
ENSJJAG00000016447	Gfm1	96	78.700	ENSGMOG00000010161	gfm1	99	78.700	Gadus_morhua
ENSJJAG00000016447	Gfm1	98	81.818	ENSGALG00000009634	GFM1	99	81.818	Gallus_gallus
ENSJJAG00000016447	Gfm1	100	79.095	ENSGAFG00000012527	gfm1	100	79.095	Gambusia_affinis
ENSJJAG00000016447	Gfm1	99	76.831	ENSGACG00000009864	gfm1	99	76.831	Gasterosteus_aculeatus
ENSJJAG00000016447	Gfm1	98	91.440	ENSGGOG00000003085	GFM1	100	90.584	Gorilla_gorilla
ENSJJAG00000016447	Gfm1	97	80.828	ENSHBUG00000002120	gfm1	97	80.828	Haplochromis_burtoni
ENSJJAG00000016447	Gfm1	100	91.247	ENSHGLG00000016855	GFM1	100	91.247	Heterocephalus_glaber_female
ENSJJAG00000016447	Gfm1	100	91.247	ENSHGLG00100013049	GFM1	100	91.247	Heterocephalus_glaber_male
ENSJJAG00000016447	Gfm1	99	78.284	ENSHCOG00000007638	gfm1	99	78.284	Hippocampus_comes
ENSJJAG00000016447	Gfm1	97	79.586	ENSIPUG00000005873	gfm1	100	78.029	Ictalurus_punctatus
ENSJJAG00000016447	Gfm1	98	91.192	ENSSTOG00000010150	GFM1	99	91.192	Ictidomys_tridecemlineatus
ENSJJAG00000016447	Gfm1	97	78.483	ENSKMAG00000020768	gfm1	97	78.483	Kryptolebias_marmoratus
ENSJJAG00000016447	Gfm1	93	79.743	ENSLBEG00000021315	gfm1	100	79.743	Labrus_bergylta
ENSJJAG00000016447	Gfm1	98	78.571	ENSLACG00000012295	GFM1	99	78.571	Latimeria_chalumnae
ENSJJAG00000016447	Gfm1	96	74.621	ENSLOCG00000003778	gfm1	99	74.621	Lepisosteus_oculatus
ENSJJAG00000016447	Gfm1	98	90.244	ENSLAFG00000010945	GFM1	100	89.379	Loxodonta_africana
ENSJJAG00000016447	Gfm1	100	90.981	ENSMFAG00000035731	GFM1	100	90.981	Macaca_fascicularis
ENSJJAG00000016447	Gfm1	100	91.114	ENSMMUG00000004961	GFM1	100	91.114	Macaca_mulatta
ENSJJAG00000016447	Gfm1	100	90.981	ENSMNEG00000033245	GFM1	100	90.981	Macaca_nemestrina
ENSJJAG00000016447	Gfm1	96	90.345	ENSMLEG00000030908	GFM1	99	90.027	Mandrillus_leucophaeus
ENSJJAG00000016447	Gfm1	100	77.896	ENSMAMG00000011760	gfm1	100	77.896	Mastacembelus_armatus
ENSJJAG00000016447	Gfm1	97	80.828	ENSMZEG00005016639	gfm1	97	80.828	Maylandia_zebra
ENSJJAG00000016447	Gfm1	96	83.171	ENSMGAG00000010641	GFM1	97	83.171	Meleagris_gallopavo
ENSJJAG00000016447	Gfm1	100	92.943	ENSMAUG00000000611	Gfm1	100	92.943	Mesocricetus_auratus
ENSJJAG00000016447	Gfm1	98	92.663	ENSMICG00000049086	GFM1	100	91.910	Microcebus_murinus
ENSJJAG00000016447	Gfm1	100	92.676	ENSMOCG00000000465	Gfm1	100	92.676	Microtus_ochrogaster
ENSJJAG00000016447	Gfm1	96	79.277	ENSMMOG00000012538	gfm1	97	79.277	Mola_mola
ENSJJAG00000016447	Gfm1	98	85.560	ENSMODG00000015673	GFM1	99	85.560	Monodelphis_domestica
ENSJJAG00000016447	Gfm1	99	77.823	ENSMALG00000012508	gfm1	99	77.823	Monopterus_albus
ENSJJAG00000016447	Gfm1	100	91.345	MGP_CAROLIEiJ_G0025052	Gfm1	100	91.345	Mus_caroli
ENSJJAG00000016447	Gfm1	100	91.611	ENSMUSG00000027774	Gfm1	100	91.611	Mus_musculus
ENSJJAG00000016447	Gfm1	100	91.345	MGP_PahariEiJ_G0026495	Gfm1	100	91.345	Mus_pahari
ENSJJAG00000016447	Gfm1	100	91.611	MGP_SPRETEiJ_G0025994	Gfm1	100	91.611	Mus_spretus
ENSJJAG00000016447	Gfm1	100	91.645	ENSMPUG00000002859	GFM1	100	91.645	Mustela_putorius_furo
ENSJJAG00000016447	Gfm1	100	91.379	ENSMLUG00000000452	GFM1	100	91.379	Myotis_lucifugus
ENSJJAG00000016447	Gfm1	100	91.611	ENSNGAG00000012375	Gfm1	100	91.611	Nannospalax_galili
ENSJJAG00000016447	Gfm1	96	80.663	ENSNBRG00000004631	gfm1	99	80.663	Neolamprologus_brichardi
ENSJJAG00000016447	Gfm1	98	91.576	ENSNLEG00000004176	GFM1	100	90.716	Nomascus_leucogenys
ENSJJAG00000016447	Gfm1	91	78.038	ENSMEUG00000007784	GFM1	99	78.038	Notamacropus_eugenii
ENSJJAG00000016447	Gfm1	100	89.894	ENSOPRG00000009860	GFM1	100	89.894	Ochotona_princeps
ENSJJAG00000016447	Gfm1	98	91.757	ENSODEG00000004316	GFM1	100	91.114	Octodon_degus
ENSJJAG00000016447	Gfm1	97	80.828	ENSONIG00000003772	gfm1	97	80.828	Oreochromis_niloticus
ENSJJAG00000016447	Gfm1	98	92.828	ENSOCUG00000013561	GFM1	100	92.440	Oryctolagus_cuniculus
ENSJJAG00000016447	Gfm1	94	81.215	ENSORLG00000006487	gfm1	100	81.215	Oryzias_latipes
ENSJJAG00000016447	Gfm1	97	80.552	ENSORLG00020003362	gfm1	97	80.552	Oryzias_latipes_hni
ENSJJAG00000016447	Gfm1	97	80.138	ENSORLG00015005829	gfm1	97	80.138	Oryzias_latipes_hsok
ENSJJAG00000016447	Gfm1	97	81.103	ENSOMEG00000012894	gfm1	97	81.103	Oryzias_melastigma
ENSJJAG00000016447	Gfm1	100	90.849	ENSOGAG00000008298	GFM1	100	90.849	Otolemur_garnettii
ENSJJAG00000016447	Gfm1	96	92.710	ENSOARG00000002409	GFM1	100	92.710	Ovis_aries
ENSJJAG00000016447	Gfm1	98	91.440	ENSPPAG00000033881	GFM1	100	90.584	Pan_paniscus
ENSJJAG00000016447	Gfm1	98	93.234	ENSPPRG00000009281	GFM1	100	92.838	Panthera_pardus
ENSJJAG00000016447	Gfm1	98	93.099	ENSPTIG00000012416	GFM1	100	92.706	Panthera_tigris_altaica
ENSJJAG00000016447	Gfm1	98	91.440	ENSPTRG00000015570	GFM1	100	90.584	Pan_troglodytes
ENSJJAG00000016447	Gfm1	100	91.114	ENSPANG00000016512	GFM1	100	91.114	Papio_anubis
ENSJJAG00000016447	Gfm1	100	77.881	ENSPKIG00000004876	gfm1	100	77.881	Paramormyrops_kingsleyae
ENSJJAG00000016447	Gfm1	98	81.611	ENSPSIG00000012567	GFM1	99	81.611	Pelodiscus_sinensis
ENSJJAG00000016447	Gfm1	96	78.611	ENSPMGG00000014068	gfm1	99	78.611	Periophthalmus_magnuspinnatus
ENSJJAG00000016447	Gfm1	100	93.609	ENSPEMG00000008942	Gfm1	100	93.609	Peromyscus_maniculatus_bairdii
ENSJJAG00000016447	Gfm1	83	85.079	ENSPCIG00000020195	GFM1	98	85.079	Phascolarctos_cinereus
ENSJJAG00000016447	Gfm1	100	79.494	ENSPFOG00000011022	gfm1	100	79.494	Poecilia_formosa
ENSJJAG00000016447	Gfm1	97	80.880	ENSPLAG00000019585	gfm1	100	78.741	Poecilia_latipinna
ENSJJAG00000016447	Gfm1	100	79.361	ENSPMEG00000012376	gfm1	100	79.361	Poecilia_mexicana
ENSJJAG00000016447	Gfm1	100	79.228	ENSPREG00000001332	gfm1	95	79.228	Poecilia_reticulata
ENSJJAG00000016447	Gfm1	98	91.576	ENSPPYG00000014244	GFM1	100	90.716	Pongo_abelii
ENSJJAG00000016447	Gfm1	93	88.620	ENSPCAG00000008934	GFM1	100	88.620	Procavia_capensis
ENSJJAG00000016447	Gfm1	98	93.478	ENSPCOG00000022259	GFM1	100	92.838	Propithecus_coquereli
ENSJJAG00000016447	Gfm1	100	91.512	ENSPVAG00000013605	GFM1	100	91.512	Pteropus_vampyrus
ENSJJAG00000016447	Gfm1	97	80.552	ENSPNYG00000006037	gfm1	97	81.085	Pundamilia_nyererei
ENSJJAG00000016447	Gfm1	100	78.695	ENSPNAG00000001237	gfm1	100	78.695	Pygocentrus_nattereri
ENSJJAG00000016447	Gfm1	100	91.212	ENSRNOG00000012873	Gfm1	100	91.212	Rattus_norvegicus
ENSJJAG00000016447	Gfm1	98	91.576	ENSRBIG00000031363	GFM1	100	90.716	Rhinopithecus_bieti
ENSJJAG00000016447	Gfm1	98	91.712	ENSRROG00000031081	GFM1	100	90.849	Rhinopithecus_roxellana
ENSJJAG00000016447	Gfm1	92	56.484	YLR069C	-	90	56.484	Saccharomyces_cerevisiae
ENSJJAG00000016447	Gfm1	100	90.849	ENSSBOG00000023252	GFM1	100	90.849	Saimiri_boliviensis_boliviensis
ENSJJAG00000016447	Gfm1	99	84.718	ENSSHAG00000017772	GFM1	99	84.718	Sarcophilus_harrisii
ENSJJAG00000016447	Gfm1	100	77.763	ENSSFOG00015003117	gfm1	99	80.000	Scleropages_formosus
ENSJJAG00000016447	Gfm1	100	75.963	ENSSMAG00000013221	gfm1	100	75.632	Scophthalmus_maximus
ENSJJAG00000016447	Gfm1	100	77.497	ENSSDUG00000018665	gfm1	100	77.497	Seriola_dumerili
ENSJJAG00000016447	Gfm1	100	77.497	ENSSLDG00000020606	gfm1	100	77.497	Seriola_lalandi_dorsalis
ENSJJAG00000016447	Gfm1	98	79.296	ENSSPUG00000018686	GFM1	100	79.296	Sphenodon_punctatus
ENSJJAG00000016447	Gfm1	100	77.364	ENSSPAG00000008800	gfm1	100	77.364	Stegastes_partitus
ENSJJAG00000016447	Gfm1	100	91.512	ENSSSCG00000025651	GFM1	100	91.512	Sus_scrofa
ENSJJAG00000016447	Gfm1	100	76.964	ENSTRUG00000009244	gfm1	100	76.964	Takifugu_rubripes
ENSJJAG00000016447	Gfm1	100	78.029	ENSTNIG00000007729	gfm1	100	78.029	Tetraodon_nigroviridis
ENSJJAG00000016447	Gfm1	89	82.963	ENSTBEG00000017404	GFM1	100	76.323	Tupaia_belangeri
ENSJJAG00000016447	Gfm1	100	91.149	ENSTTRG00000001735	GFM1	100	91.149	Tursiops_truncatus
ENSJJAG00000016447	Gfm1	98	92.828	ENSUAMG00000026381	GFM1	100	92.308	Ursus_americanus
ENSJJAG00000016447	Gfm1	98	92.693	ENSUMAG00000011268	GFM1	100	92.175	Ursus_maritimus
ENSJJAG00000016447	Gfm1	100	88.181	ENSVPAG00000009444	GFM1	100	88.181	Vicugna_pacos
ENSJJAG00000016447	Gfm1	99	91.455	ENSVVUG00000020091	GFM1	100	93.935	Vulpes_vulpes
ENSJJAG00000016447	Gfm1	100	81.555	ENSXETG00000032551	GFM1	100	81.555	Xenopus_tropicalis
ENSJJAG00000016447	Gfm1	50	80.423	ENSXCOG00000012590	gfm1	87	80.423	Xiphophorus_couchianus
ENSJJAG00000016447	Gfm1	100	79.228	ENSXMAG00000000261	gfm1	100	79.228	Xiphophorus_maculatus