EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000016840 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 26431 bases
Position: chrJH725438.1:64602769-64629199
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000014377	APOBEC_N	PF08210.11	1.6e-72	1	2
ENSJJAP00000014377	APOBEC_N	PF08210.11	1.6e-72	2	2
ENSJJAP00000014377	APOBEC_C	PF05240.14	1.8e-40	1	2
ENSJJAP00000014377	APOBEC_C	PF05240.14	1.8e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000020875	-	1110	-	ENSJJAP00000014377	369 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000016840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000016840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000016840	-	83	39.855	ENSJJAG00000000908	Aicda	97	39.855
ENSJJAG00000016840	-	64	32.031	ENSJJAG00000022108	Apobec1	55	32.031
ENSJJAG00000016840	-	82	35.912	ENSJJAG00000009733	Apobec2	80	35.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000016840	-	73	48.529	ENSG00000100298	APOBEC3H	97	48.529	Homo_sapiens
ENSJJAG00000016840	-	85	42.063	ENSAMEG00000010818	-	94	42.063	Ailuropoda_melanoleuca
ENSJJAG00000016840	-	73	49.640	ENSANAG00000025410	APOBEC3H	74	49.640	Aotus_nancymaae
ENSJJAG00000016840	-	87	45.455	ENSBTAG00000007755	APOBEC3H	95	45.455	Bos_taurus
ENSJJAG00000016840	-	79	47.407	ENSCJAG00000012524	APOBEC3H	87	47.407	Callithrix_jacchus
ENSJJAG00000016840	-	84	48.227	ENSCAFG00000001361	APOBEC3Z3	92	48.227	Canis_familiaris
ENSJJAG00000016840	-	82	49.635	ENSCAFG00020002584	-	91	49.635	Canis_lupus_dingo
ENSJJAG00000016840	-	83	45.768	ENSCHIG00000026580	-	96	45.768	Capra_hircus
ENSJJAG00000016840	-	78	54.815	ENSTSYG00000032894	-	92	54.815	Carlito_syrichta
ENSJJAG00000016840	-	97	46.250	ENSCPOG00000009257	-	95	46.250	Cavia_porcellus
ENSJJAG00000016840	-	74	47.482	ENSCCAG00000008525	APOBEC3H	88	47.482	Cebus_capucinus
ENSJJAG00000016840	-	78	49.265	ENSCATG00000030302	APOBEC3H	92	49.265	Cercocebus_atys
ENSJJAG00000016840	-	88	44.670	ENSCLAG00000016615	-	97	44.670	Chinchilla_lanigera
ENSJJAG00000016840	-	82	51.471	ENSCSAG00000006371	APOBEC3H	83	51.471	Chlorocebus_sabaeus
ENSJJAG00000016840	-	99	50.971	ENSCGRG00001022976	Apobec3	99	50.971	Cricetulus_griseus_chok1gshd
ENSJJAG00000016840	-	99	50.971	ENSCGRG00000005621	Apobec3	99	50.971	Cricetulus_griseus_crigri
ENSJJAG00000016840	-	90	56.936	ENSDORG00000027271	-	100	55.102	Dipodomys_ordii
ENSJJAG00000016840	-	78	50.725	ENSECAG00000007726	APOBEC3H	77	50.725	Equus_caballus
ENSJJAG00000016840	-	74	52.239	ENSFCAG00000005251	APOBEC3Z3	83	52.239	Felis_catus
ENSJJAG00000016840	-	78	56.934	ENSSTOG00000007125	-	75	56.934	Ictidomys_tridecemlineatus
ENSJJAG00000016840	-	85	43.925	ENSLAFG00000027404	-	97	43.925	Loxodonta_africana
ENSJJAG00000016840	-	82	50.735	ENSMFAG00000031827	APOBEC3H	88	50.735	Macaca_fascicularis
ENSJJAG00000016840	-	82	50.735	ENSMMUG00000001016	APOBEC3H	88	50.735	Macaca_mulatta
ENSJJAG00000016840	-	82	50.735	ENSMNEG00000039259	APOBEC3H	88	50.735	Macaca_nemestrina
ENSJJAG00000016840	-	71	50.000	ENSMLEG00000033417	APOBEC3H	92	50.000	Mandrillus_leucophaeus
ENSJJAG00000016840	-	99	50.485	ENSMAUG00000011683	Apobec3	97	54.958	Mesocricetus_auratus
ENSJJAG00000016840	-	99	51.306	ENSMOCG00000021576	Apobec3	96	56.354	Microtus_ochrogaster
ENSJJAG00000016840	-	99	48.529	MGP_CAROLIEiJ_G0020029	Apobec3	99	53.009	Mus_caroli
ENSJJAG00000016840	-	99	48.522	ENSMUSG00000009585	Apobec3	97	55.789	Mus_musculus
ENSJJAG00000016840	-	99	47.677	MGP_PahariEiJ_G0020031	-	99	51.282	Mus_pahari
ENSJJAG00000016840	-	99	48.768	MGP_SPRETEiJ_G0020927	Apobec3	99	51.282	Mus_spretus
ENSJJAG00000016840	-	85	47.531	ENSMPUG00000013239	-	90	47.531	Mustela_putorius_furo
ENSJJAG00000016840	-	99	48.325	ENSNGAG00000018998	Apobec3	98	50.656	Nannospalax_galili
ENSJJAG00000016840	-	78	52.206	ENSNLEG00000015218	-	84	52.206	Nomascus_leucogenys
ENSJJAG00000016840	-	90	44.476	ENSOCUG00000023913	-	94	44.476	Oryctolagus_cuniculus
ENSJJAG00000016840	-	83	46.395	ENSOARG00000016290	APOBEC3F	97	46.395	Ovis_aries
ENSJJAG00000016840	-	73	50.000	ENSPPAG00000036522	APOBEC3H	99	50.000	Pan_paniscus
ENSJJAG00000016840	-	74	51.852	ENSPPRG00000003941	-	83	51.852	Panthera_pardus
ENSJJAG00000016840	-	86	44.560	ENSPPRG00000003675	-	100	44.560	Panthera_pardus
ENSJJAG00000016840	-	74	52.593	ENSPTIG00000010283	-	83	52.593	Panthera_tigris_altaica
ENSJJAG00000016840	-	73	50.000	ENSPTRG00000014390	APOBEC3H	99	50.000	Pan_troglodytes
ENSJJAG00000016840	-	79	52.459	ENSPANG00000010774	APOBEC3H	88	50.735	Papio_anubis
ENSJJAG00000016840	-	99	47.442	ENSPEMG00000000456	Apobec3	99	47.442	Peromyscus_maniculatus_bairdii
ENSJJAG00000016840	-	70	50.000	ENSPPYG00000011834	-	70	50.000	Pongo_abelii
ENSJJAG00000016840	-	78	42.647	ENSPCAG00000015655	-	99	42.647	Procavia_capensis
ENSJJAG00000016840	-	83	51.825	ENSPVAG00000009462	-	100	51.825	Pteropus_vampyrus
ENSJJAG00000016840	-	56	49.600	ENSPVAG00000024161	-	95	49.600	Pteropus_vampyrus
ENSJJAG00000016840	-	56	48.800	ENSPVAG00000024267	-	95	48.800	Pteropus_vampyrus
ENSJJAG00000016840	-	90	52.408	ENSRNOG00000016852	Apobec3	96	52.408	Rattus_norvegicus
ENSJJAG00000016840	-	74	51.471	ENSRBIG00000029088	APOBEC3H	92	50.694	Rhinopithecus_bieti
ENSJJAG00000016840	-	74	51.471	ENSRROG00000024699	APOBEC3H	92	50.694	Rhinopithecus_roxellana
ENSJJAG00000016840	-	74	50.000	ENSSBOG00000030005	APOBEC3H	97	50.000	Saimiri_boliviensis_boliviensis
ENSJJAG00000016840	-	89	46.821	ENSSSCG00000000091	APOBEC3B	91	46.821	Sus_scrofa
ENSJJAG00000016840	-	76	53.077	ENSTBEG00000001532	-	99	53.077	Tupaia_belangeri
ENSJJAG00000016840	-	79	50.000	ENSTTRG00000001266	-	99	50.000	Tursiops_truncatus
ENSJJAG00000016840	-	83	52.817	ENSUAMG00000004427	-	82	52.817	Ursus_americanus
ENSJJAG00000016840	-	88	55.556	ENSUMAG00000014435	-	90	55.556	Ursus_maritimus
ENSJJAG00000016840	-	53	52.326	ENSVPAG00000011108	-	87	52.326	Vicugna_pacos