EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000016926 (Gene tree)
Gene ID: 101601479
Gene Symbol: Crnkl1
Alias: 1200013P10Rik|5730590A01Rik|crn
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 15893 bases
Position: chrJH725555.1:3251630-3267522
Accession: 101601479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000014498	HAT	PF02184.16	1.5e-35	1	2
ENSJJAP00000014498	HAT	PF02184.16	1.5e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000021000	-	2112	XM_004668738	ENSJJAP00000014498	703 (aa)	XP_004668795	-

Gene Model

Click here to download ENSJJAG00000016926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000016926's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000016926	Crnkl1	100	94.452	ENSG00000101343	CRNKL1	100	94.452	Homo_sapiens
ENSJJAG00000016926	Crnkl1	99	84.165	ENSAPOG00000009705	crnkl1	97	84.660	Acanthochromis_polyacanthus
ENSJJAG00000016926	Crnkl1	100	96.302	ENSAMEG00000000270	CRNKL1	83	96.302	Ailuropoda_melanoleuca
ENSJJAG00000016926	Crnkl1	98	84.325	ENSACIG00000015267	crnkl1	89	84.325	Amphilophus_citrinellus
ENSJJAG00000016926	Crnkl1	99	84.308	ENSAOCG00000021964	crnkl1	91	84.308	Amphiprion_ocellaris
ENSJJAG00000016926	Crnkl1	99	84.165	ENSAPEG00000015041	crnkl1	91	84.165	Amphiprion_percula
ENSJJAG00000016926	Crnkl1	98	84.748	ENSATEG00000001068	crnkl1	89	84.748	Anabas_testudineus
ENSJJAG00000016926	Crnkl1	99	88.746	ENSAPLG00000013105	CRNKL1	99	88.746	Anas_platyrhynchos
ENSJJAG00000016926	Crnkl1	99	90.558	ENSACAG00000005284	CRNKL1	99	90.558	Anolis_carolinensis
ENSJJAG00000016926	Crnkl1	92	94.907	ENSANAG00000024889	CRNKL1	100	94.907	Aotus_nancymaae
ENSJJAG00000016926	Crnkl1	99	85.137	ENSACLG00000010813	crnkl1	90	85.137	Astatotilapia_calliptera
ENSJJAG00000016926	Crnkl1	97	85.441	ENSAMXG00000018334	crnkl1	92	83.595	Astyanax_mexicanus
ENSJJAG00000016926	Crnkl1	100	95.164	ENSBTAG00000008472	CRNKL1	99	95.164	Bos_taurus
ENSJJAG00000016926	Crnkl1	93	60.546	WBGene00019762	M03F8.3	91	59.657	Caenorhabditis_elegans
ENSJJAG00000016926	Crnkl1	100	94.452	ENSCJAG00000005393	CRNKL1	100	94.452	Callithrix_jacchus
ENSJJAG00000016926	Crnkl1	100	96.017	ENSCAFG00000005333	CRNKL1	94	96.017	Canis_familiaris
ENSJJAG00000016926	Crnkl1	100	96.017	ENSCAFG00020027488	CRNKL1	100	96.017	Canis_lupus_dingo
ENSJJAG00000016926	Crnkl1	100	95.021	ENSCHIG00000013171	CRNKL1	99	95.021	Capra_hircus
ENSJJAG00000016926	Crnkl1	100	95.021	ENSTSYG00000004197	CRNKL1	100	95.021	Carlito_syrichta
ENSJJAG00000016926	Crnkl1	96	94.488	ENSCAPG00000010501	CRNKL1	99	94.488	Cavia_aperea
ENSJJAG00000016926	Crnkl1	100	94.879	ENSCPOG00000004418	CRNKL1	100	94.879	Cavia_porcellus
ENSJJAG00000016926	Crnkl1	100	94.310	ENSCCAG00000027037	CRNKL1	100	94.310	Cebus_capucinus
ENSJJAG00000016926	Crnkl1	100	94.452	ENSCATG00000034247	CRNKL1	100	94.452	Cercocebus_atys
ENSJJAG00000016926	Crnkl1	100	95.733	ENSCLAG00000013859	CRNKL1	100	95.733	Chinchilla_lanigera
ENSJJAG00000016926	Crnkl1	100	94.452	ENSCSAG00000011434	CRNKL1	100	94.452	Chlorocebus_sabaeus
ENSJJAG00000016926	Crnkl1	100	95.448	ENSCHOG00000006371	CRNKL1	84	95.448	Choloepus_hoffmanni
ENSJJAG00000016926	Crnkl1	99	91.726	ENSCPBG00000023501	CRNKL1	99	91.726	Chrysemys_picta_bellii
ENSJJAG00000016926	Crnkl1	96	67.994	ENSCING00000002709	-	99	66.571	Ciona_intestinalis
ENSJJAG00000016926	Crnkl1	100	94.595	ENSCANG00000038789	CRNKL1	100	94.595	Colobus_angolensis_palliatus
ENSJJAG00000016926	Crnkl1	100	96.444	ENSCGRG00001001115	-	99	96.444	Cricetulus_griseus_chok1gshd
ENSJJAG00000016926	Crnkl1	100	96.444	ENSCGRG00001000687	-	99	96.444	Cricetulus_griseus_chok1gshd
ENSJJAG00000016926	Crnkl1	100	96.444	ENSCGRG00000007854	Crnkl1	99	96.444	Cricetulus_griseus_crigri
ENSJJAG00000016926	Crnkl1	98	84.257	ENSCSEG00000005594	crnkl1	85	84.257	Cynoglossus_semilaevis
ENSJJAG00000016926	Crnkl1	97	85.044	ENSCVAG00000015172	crnkl1	92	83.167	Cyprinodon_variegatus
ENSJJAG00000016926	Crnkl1	96	84.513	ENSDARG00000007901	crnkl1	90	83.286	Danio_rerio
ENSJJAG00000016926	Crnkl1	99	96.000	ENSDNOG00000016226	CRNKL1	95	96.000	Dasypus_novemcinctus
ENSJJAG00000016926	Crnkl1	97	86.443	ENSDORG00000030174	-	99	86.443	Dipodomys_ordii
ENSJJAG00000016926	Crnkl1	97	86.880	ENSDORG00000023724	-	99	86.880	Dipodomys_ordii
ENSJJAG00000016926	Crnkl1	100	96.028	ENSDORG00000000394	-	100	96.028	Dipodomys_ordii
ENSJJAG00000016926	Crnkl1	97	67.052	FBgn0000377	crn	96	67.052	Drosophila_melanogaster
ENSJJAG00000016926	Crnkl1	100	72.954	ENSETEG00000003711	CRNKL1	84	77.531	Echinops_telfairi
ENSJJAG00000016926	Crnkl1	99	59.381	ENSEBUG00000013461	crnkl1	96	55.301	Eptatretus_burgeri
ENSJJAG00000016926	Crnkl1	100	96.017	ENSEASG00005002072	CRNKL1	100	96.017	Equus_asinus_asinus
ENSJJAG00000016926	Crnkl1	100	96.017	ENSECAG00000022215	CRNKL1	100	96.017	Equus_caballus
ENSJJAG00000016926	Crnkl1	99	92.816	ENSEEUG00000000413	CRNKL1	92	92.888	Erinaceus_europaeus
ENSJJAG00000016926	Crnkl1	98	83.673	ENSELUG00000015424	crnkl1	97	82.646	Esox_lucius
ENSJJAG00000016926	Crnkl1	100	96.302	ENSFCAG00000000714	CRNKL1	100	96.302	Felis_catus
ENSJJAG00000016926	Crnkl1	98	89.665	ENSFALG00000004611	CRNKL1	100	89.665	Ficedula_albicollis
ENSJJAG00000016926	Crnkl1	100	95.590	ENSFDAG00000000604	CRNKL1	100	95.590	Fukomys_damarensis
ENSJJAG00000016926	Crnkl1	98	84.180	ENSFHEG00000013163	crnkl1	88	84.180	Fundulus_heteroclitus
ENSJJAG00000016926	Crnkl1	97	84.187	ENSGMOG00000007609	crnkl1	94	82.739	Gadus_morhua
ENSJJAG00000016926	Crnkl1	99	91.155	ENSGALG00000008429	CRNKL1	99	91.155	Gallus_gallus
ENSJJAG00000016926	Crnkl1	97	84.604	ENSGAFG00000014249	crnkl1	90	83.024	Gambusia_affinis
ENSJJAG00000016926	Crnkl1	99	83.548	ENSGACG00000011852	crnkl1	91	83.548	Gasterosteus_aculeatus
ENSJJAG00000016926	Crnkl1	96	90.923	ENSGAGG00000021233	CRNKL1	100	90.923	Gopherus_agassizii
ENSJJAG00000016926	Crnkl1	100	94.452	ENSGGOG00000014176	CRNKL1	100	94.452	Gorilla_gorilla
ENSJJAG00000016926	Crnkl1	99	84.993	ENSHBUG00000005246	crnkl1	90	84.993	Haplochromis_burtoni
ENSJJAG00000016926	Crnkl1	100	95.448	ENSHGLG00000010856	CRNKL1	100	95.448	Heterocephalus_glaber_female
ENSJJAG00000016926	Crnkl1	100	95.448	ENSHGLG00100011521	CRNKL1	100	95.448	Heterocephalus_glaber_male
ENSJJAG00000016926	Crnkl1	97	83.016	ENSHCOG00000006420	crnkl1	98	81.662	Hippocampus_comes
ENSJJAG00000016926	Crnkl1	94	85.693	ENSIPUG00000006751	crnkl1	92	84.683	Ictalurus_punctatus
ENSJJAG00000016926	Crnkl1	97	73.715	ENSIPUG00000006836	-	98	73.508	Ictalurus_punctatus
ENSJJAG00000016926	Crnkl1	93	66.769	ENSIPUG00000000315	-	100	67.945	Ictalurus_punctatus
ENSJJAG00000016926	Crnkl1	100	96.586	ENSSTOG00000014747	CRNKL1	100	96.586	Ictidomys_tridecemlineatus
ENSJJAG00000016926	Crnkl1	99	84.097	ENSKMAG00000003620	crnkl1	86	84.097	Kryptolebias_marmoratus
ENSJJAG00000016926	Crnkl1	97	69.086	ENSLBEG00000003543	crnkl1	92	69.286	Labrus_bergylta
ENSJJAG00000016926	Crnkl1	99	85.837	ENSLACG00000001129	CRNKL1	99	85.837	Latimeria_chalumnae
ENSJJAG00000016926	Crnkl1	97	86.912	ENSLOCG00000016889	crnkl1	95	85.429	Lepisosteus_oculatus
ENSJJAG00000016926	Crnkl1	100	95.739	ENSLAFG00000004512	CRNKL1	100	95.739	Loxodonta_africana
ENSJJAG00000016926	Crnkl1	100	94.452	ENSMFAG00000039893	CRNKL1	100	94.452	Macaca_fascicularis
ENSJJAG00000016926	Crnkl1	100	94.452	ENSMMUG00000007709	CRNKL1	100	94.452	Macaca_mulatta
ENSJJAG00000016926	Crnkl1	100	94.452	ENSMNEG00000037490	CRNKL1	100	94.452	Macaca_nemestrina
ENSJJAG00000016926	Crnkl1	100	94.452	ENSMLEG00000034885	CRNKL1	100	94.452	Mandrillus_leucophaeus
ENSJJAG00000016926	Crnkl1	99	83.880	ENSMAMG00000008757	crnkl1	90	83.880	Mastacembelus_armatus
ENSJJAG00000016926	Crnkl1	99	85.137	ENSMZEG00005022345	crnkl1	90	85.137	Maylandia_zebra
ENSJJAG00000016926	Crnkl1	99	90.870	ENSMGAG00000003452	CRNKL1	94	90.870	Meleagris_gallopavo
ENSJJAG00000016926	Crnkl1	100	96.302	ENSMAUG00000020764	Crnkl1	99	96.302	Mesocricetus_auratus
ENSJJAG00000016926	Crnkl1	100	95.448	ENSMICG00000006048	CRNKL1	100	95.448	Microcebus_murinus
ENSJJAG00000016926	Crnkl1	97	68.768	ENSMOCG00000004179	-	96	68.986	Microtus_ochrogaster
ENSJJAG00000016926	Crnkl1	100	90.896	ENSMOCG00000000681	-	99	90.896	Microtus_ochrogaster
ENSJJAG00000016926	Crnkl1	92	83.746	ENSMMOG00000017601	crnkl1	97	83.746	Mola_mola
ENSJJAG00000016926	Crnkl1	100	84.211	ENSMODG00000010857	-	99	84.211	Monodelphis_domestica
ENSJJAG00000016926	Crnkl1	100	91.750	ENSMODG00000005961	-	99	91.750	Monodelphis_domestica
ENSJJAG00000016926	Crnkl1	98	62.037	ENSMALG00000011211	crnkl1	88	62.409	Monopterus_albus
ENSJJAG00000016926	Crnkl1	100	96.586	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.586	Mus_caroli
ENSJJAG00000016926	Crnkl1	100	96.728	ENSMUSG00000001767	Crnkl1	99	96.728	Mus_musculus
ENSJJAG00000016926	Crnkl1	100	94.737	MGP_PahariEiJ_G0025838	Crnkl1	99	94.737	Mus_pahari
ENSJJAG00000016926	Crnkl1	100	96.586	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.586	Mus_spretus
ENSJJAG00000016926	Crnkl1	100	96.159	ENSMPUG00000001226	CRNKL1	100	96.159	Mustela_putorius_furo
ENSJJAG00000016926	Crnkl1	100	96.017	ENSMLUG00000016513	CRNKL1	89	96.017	Myotis_lucifugus
ENSJJAG00000016926	Crnkl1	100	97.017	ENSNGAG00000023097	Crnkl1	100	97.017	Nannospalax_galili
ENSJJAG00000016926	Crnkl1	99	85.281	ENSNBRG00000007867	crnkl1	89	85.281	Neolamprologus_brichardi
ENSJJAG00000016926	Crnkl1	100	91.323	ENSNLEG00000009862	CRNKL1	100	91.323	Nomascus_leucogenys
ENSJJAG00000016926	Crnkl1	100	83.807	ENSMEUG00000002361	-	99	83.807	Notamacropus_eugenii
ENSJJAG00000016926	Crnkl1	98	92.711	ENSMEUG00000012167	-	100	92.711	Notamacropus_eugenii
ENSJJAG00000016926	Crnkl1	86	65.730	ENSOPRG00000009242	-	61	65.730	Ochotona_princeps
ENSJJAG00000016926	Crnkl1	100	95.448	ENSODEG00000012175	CRNKL1	100	95.448	Octodon_degus
ENSJJAG00000016926	Crnkl1	99	85.570	ENSONIG00000018728	crnkl1	89	85.570	Oreochromis_niloticus
ENSJJAG00000016926	Crnkl1	99	96.011	ENSOCUG00000015484	CRNKL1	83	96.011	Oryctolagus_cuniculus
ENSJJAG00000016926	Crnkl1	99	81.598	ENSORLG00000017240	crnkl1	96	79.542	Oryzias_latipes
ENSJJAG00000016926	Crnkl1	98	82.734	ENSORLG00020001742	crnkl1	91	82.734	Oryzias_latipes_hni
ENSJJAG00000016926	Crnkl1	97	83.578	ENSORLG00015019564	crnkl1	89	83.578	Oryzias_latipes_hsok
ENSJJAG00000016926	Crnkl1	99	82.596	ENSOMEG00000019895	crnkl1	91	82.596	Oryzias_melastigma
ENSJJAG00000016926	Crnkl1	100	94.737	ENSOGAG00000011544	CRNKL1	100	94.737	Otolemur_garnettii
ENSJJAG00000016926	Crnkl1	100	95.448	ENSOARG00000002150	CRNKL1	89	95.448	Ovis_aries
ENSJJAG00000016926	Crnkl1	99	93.534	ENSPPAG00000027847	CRNKL1	83	93.599	Pan_paniscus
ENSJJAG00000016926	Crnkl1	100	96.302	ENSPPRG00000001955	CRNKL1	100	96.302	Panthera_pardus
ENSJJAG00000016926	Crnkl1	100	96.302	ENSPTIG00000007393	CRNKL1	100	96.302	Panthera_tigris_altaica
ENSJJAG00000016926	Crnkl1	100	94.310	ENSPTRG00000030609	CRNKL1	100	94.310	Pan_troglodytes
ENSJJAG00000016926	Crnkl1	100	94.452	ENSPANG00000017420	CRNKL1	100	94.452	Papio_anubis
ENSJJAG00000016926	Crnkl1	96	81.324	ENSPKIG00000017093	crnkl1	89	80.631	Paramormyrops_kingsleyae
ENSJJAG00000016926	Crnkl1	99	90.844	ENSPSIG00000012705	CRNKL1	99	90.844	Pelodiscus_sinensis
ENSJJAG00000016926	Crnkl1	99	77.698	ENSPMGG00000006263	crnkl1	96	77.698	Periophthalmus_magnuspinnatus
ENSJJAG00000016926	Crnkl1	100	96.444	ENSPEMG00000000073	-	99	96.444	Peromyscus_maniculatus_bairdii
ENSJJAG00000016926	Crnkl1	99	80.540	ENSPMAG00000002250	crnkl1	99	80.540	Petromyzon_marinus
ENSJJAG00000016926	Crnkl1	100	92.603	ENSPCIG00000025825	CRNKL1	96	92.603	Phascolarctos_cinereus
ENSJJAG00000016926	Crnkl1	97	84.457	ENSPFOG00000005102	crnkl1	93	82.670	Poecilia_formosa
ENSJJAG00000016926	Crnkl1	97	84.457	ENSPLAG00000007288	crnkl1	90	82.553	Poecilia_latipinna
ENSJJAG00000016926	Crnkl1	97	84.604	ENSPMEG00000008865	crnkl1	93	82.812	Poecilia_mexicana
ENSJJAG00000016926	Crnkl1	97	84.164	ENSPREG00000012615	crnkl1	92	82.429	Poecilia_reticulata
ENSJJAG00000016926	Crnkl1	100	94.452	ENSPPYG00000010747	CRNKL1	81	94.452	Pongo_abelii
ENSJJAG00000016926	Crnkl1	99	89.799	ENSPCAG00000003296	CRNKL1	85	89.900	Procavia_capensis
ENSJJAG00000016926	Crnkl1	100	94.737	ENSPCOG00000017608	CRNKL1	83	94.737	Propithecus_coquereli
ENSJJAG00000016926	Crnkl1	100	95.875	ENSPVAG00000006207	CRNKL1	83	95.875	Pteropus_vampyrus
ENSJJAG00000016926	Crnkl1	99	84.993	ENSPNYG00000001977	crnkl1	90	84.993	Pundamilia_nyererei
ENSJJAG00000016926	Crnkl1	98	86.297	ENSPNAG00000001507	crnkl1	98	82.739	Pygocentrus_nattereri
ENSJJAG00000016926	Crnkl1	100	96.728	ENSRNOG00000010587	Crnkl1	99	96.728	Rattus_norvegicus
ENSJJAG00000016926	Crnkl1	100	96.302	ENSRNOG00000040045	Crnkl1	99	96.302	Rattus_norvegicus
ENSJJAG00000016926	Crnkl1	100	94.310	ENSRBIG00000031770	CRNKL1	100	94.310	Rhinopithecus_bieti
ENSJJAG00000016926	Crnkl1	100	94.168	ENSRROG00000040450	CRNKL1	100	94.168	Rhinopithecus_roxellana
ENSJJAG00000016926	Crnkl1	94	36.827	YLR117C	CLF1	99	36.917	Saccharomyces_cerevisiae
ENSJJAG00000016926	Crnkl1	100	94.310	ENSSBOG00000029672	CRNKL1	100	94.310	Saimiri_boliviensis_boliviensis
ENSJJAG00000016926	Crnkl1	96	72.444	ENSSHAG00000011199	CRNKL1	99	72.444	Sarcophilus_harrisii
ENSJJAG00000016926	Crnkl1	96	85.546	ENSSFOG00015000946	crnkl1	89	84.000	Scleropages_formosus
ENSJJAG00000016926	Crnkl1	99	82.621	ENSSMAG00000007933	crnkl1	87	83.988	Scophthalmus_maximus
ENSJJAG00000016926	Crnkl1	99	78.818	ENSSDUG00000012625	crnkl1	87	78.818	Seriola_dumerili
ENSJJAG00000016926	Crnkl1	99	84.726	ENSSLDG00000021413	crnkl1	88	84.726	Seriola_lalandi_dorsalis
ENSJJAG00000016926	Crnkl1	100	94.879	ENSSARG00000006443	CRNKL1	82	94.879	Sorex_araneus
ENSJJAG00000016926	Crnkl1	99	91.130	ENSSPUG00000005254	CRNKL1	99	91.130	Sphenodon_punctatus
ENSJJAG00000016926	Crnkl1	99	83.784	ENSSPAG00000016150	crnkl1	88	83.784	Stegastes_partitus
ENSJJAG00000016926	Crnkl1	100	96.159	ENSSSCG00000038587	CRNKL1	99	96.159	Sus_scrofa
ENSJJAG00000016926	Crnkl1	99	90.300	ENSTGUG00000007645	CRNKL1	98	90.300	Taeniopygia_guttata
ENSJJAG00000016926	Crnkl1	98	78.717	ENSTRUG00000015417	crnkl1	90	77.986	Takifugu_rubripes
ENSJJAG00000016926	Crnkl1	97	83.578	ENSTNIG00000010710	crnkl1	99	82.168	Tetraodon_nigroviridis
ENSJJAG00000016926	Crnkl1	92	94.444	ENSTBEG00000001304	CRNKL1	82	94.444	Tupaia_belangeri
ENSJJAG00000016926	Crnkl1	92	92.130	ENSTTRG00000000484	CRNKL1	81	92.130	Tursiops_truncatus
ENSJJAG00000016926	Crnkl1	100	96.302	ENSUAMG00000018586	CRNKL1	100	96.302	Ursus_americanus
ENSJJAG00000016926	Crnkl1	100	96.302	ENSUMAG00000024957	CRNKL1	100	96.302	Ursus_maritimus
ENSJJAG00000016926	Crnkl1	100	96.017	ENSVVUG00000012559	CRNKL1	82	96.017	Vulpes_vulpes
ENSJJAG00000016926	Crnkl1	99	89.174	ENSXETG00000009698	crnkl1	99	89.174	Xenopus_tropicalis
ENSJJAG00000016926	Crnkl1	97	84.311	ENSXCOG00000000824	crnkl1	91	82.665	Xiphophorus_couchianus
ENSJJAG00000016926	Crnkl1	97	84.604	ENSXMAG00000006896	crnkl1	91	82.951	Xiphophorus_maculatus