EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000017055 (Gene tree)
Gene ID: 101602197
Gene Symbol: Tnrc6c
Alias: 9930033H14Rik
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 84098 bases
Position: chrJH725452.1:18132781-18216878
Accession: 101602197
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000014670	Ago_hook	PF10427.9	9.6e-20	1	1
ENSJJAP00000014670	RRM_1	PF00076.22	0.00022	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000021173	-	5688	XM_004655230	ENSJJAP00000014670	1895 (aa)	XP_004655287	-

Gene Model

Click here to download ENSJJAG00000017055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000017055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000017055	Tnrc6c	98	35.508	ENSJJAG00000015779	Tnrc6b	96	34.236

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000017055	Tnrc6c	99	86.947	ENSG00000078687	TNRC6C	100	88.869	Homo_sapiens
ENSJJAG00000017055	Tnrc6c	71	54.694	ENSAPOG00000019749	tnrc6c1	98	49.492	Acanthochromis_polyacanthus
ENSJJAG00000017055	Tnrc6c	93	83.270	ENSAMEG00000013756	TNRC6C	99	83.324	Ailuropoda_melanoleuca
ENSJJAG00000017055	Tnrc6c	88	50.823	ENSACIG00000008075	tnrc6c1	97	52.450	Amphilophus_citrinellus
ENSJJAG00000017055	Tnrc6c	67	69.579	ENSAOCG00000023968	tnrc6c1	99	48.816	Amphiprion_ocellaris
ENSJJAG00000017055	Tnrc6c	71	54.437	ENSAPEG00000009020	tnrc6c1	99	49.073	Amphiprion_percula
ENSJJAG00000017055	Tnrc6c	99	80.692	ENSAPLG00000005456	TNRC6C	100	80.712	Anas_platyrhynchos
ENSJJAG00000017055	Tnrc6c	99	80.433	ENSACAG00000016198	TNRC6C	98	81.165	Anolis_carolinensis
ENSJJAG00000017055	Tnrc6c	99	86.524	ENSANAG00000021554	TNRC6C	100	88.627	Aotus_nancymaae
ENSJJAG00000017055	Tnrc6c	89	50.712	ENSACLG00000000424	tnrc6c1	97	52.221	Astatotilapia_calliptera
ENSJJAG00000017055	Tnrc6c	99	83.100	ENSBTAG00000018658	TNRC6C	100	86.042	Bos_taurus
ENSJJAG00000017055	Tnrc6c	99	86.681	ENSCJAG00000019431	TNRC6C	100	88.686	Callithrix_jacchus
ENSJJAG00000017055	Tnrc6c	99	85.759	ENSCAFG00000005224	TNRC6C	99	85.707	Canis_familiaris
ENSJJAG00000017055	Tnrc6c	99	87.926	ENSCAFG00020006661	TNRC6C	100	87.205	Canis_lupus_dingo
ENSJJAG00000017055	Tnrc6c	99	84.141	ENSCHIG00000026004	TNRC6C	100	84.973	Capra_hircus
ENSJJAG00000017055	Tnrc6c	89	87.421	ENSTSYG00000005403	TNRC6C	100	87.536	Carlito_syrichta
ENSJJAG00000017055	Tnrc6c	98	84.267	ENSCAPG00000007307	TNRC6C	99	84.373	Cavia_aperea
ENSJJAG00000017055	Tnrc6c	99	88.104	ENSCPOG00000000467	TNRC6C	100	88.704	Cavia_porcellus
ENSJJAG00000017055	Tnrc6c	99	87.097	ENSCCAG00000030524	TNRC6C	100	88.981	Cebus_capucinus
ENSJJAG00000017055	Tnrc6c	99	86.993	ENSCATG00000033135	TNRC6C	100	88.863	Cercocebus_atys
ENSJJAG00000017055	Tnrc6c	99	89.708	ENSCLAG00000011139	TNRC6C	99	89.538	Chinchilla_lanigera
ENSJJAG00000017055	Tnrc6c	99	86.524	ENSCSAG00000005167	TNRC6C	99	86.576	Chlorocebus_sabaeus
ENSJJAG00000017055	Tnrc6c	69	89.606	ENSCHOG00000000088	TNRC6C	75	89.666	Choloepus_hoffmanni
ENSJJAG00000017055	Tnrc6c	92	83.494	ENSCPBG00000027960	TNRC6C	100	84.629	Chrysemys_picta_bellii
ENSJJAG00000017055	Tnrc6c	99	86.681	ENSCANG00000041771	TNRC6C	100	88.450	Colobus_angolensis_palliatus
ENSJJAG00000017055	Tnrc6c	99	89.516	ENSCGRG00001022686	Tnrc6c	100	90.118	Cricetulus_griseus_chok1gshd
ENSJJAG00000017055	Tnrc6c	99	89.516	ENSCGRG00000018041	Tnrc6c	100	90.118	Cricetulus_griseus_crigri
ENSJJAG00000017055	Tnrc6c	60	37.620	ENSCSEG00000012744	tnrc6c1	98	47.355	Cynoglossus_semilaevis
ENSJJAG00000017055	Tnrc6c	99	51.805	ENSDARG00000076847	tnrc6c1	84	58.222	Danio_rerio
ENSJJAG00000017055	Tnrc6c	99	82.503	ENSDNOG00000003247	TNRC6C	99	82.814	Dasypus_novemcinctus
ENSJJAG00000017055	Tnrc6c	98	85.981	ENSDORG00000004558	Tnrc6c	100	86.769	Dipodomys_ordii
ENSJJAG00000017055	Tnrc6c	82	80.397	ENSETEG00000005527	TNRC6C	90	80.484	Echinops_telfairi
ENSJJAG00000017055	Tnrc6c	89	87.729	ENSEASG00005004799	TNRC6C	100	87.847	Equus_asinus_asinus
ENSJJAG00000017055	Tnrc6c	99	86.961	ENSECAG00000012486	TNRC6C	99	86.961	Equus_caballus
ENSJJAG00000017055	Tnrc6c	88	84.602	ENSEEUG00000010008	TNRC6C	96	84.602	Erinaceus_europaeus
ENSJJAG00000017055	Tnrc6c	99	83.645	ENSFCAG00000028358	TNRC6C	100	86.126	Felis_catus
ENSJJAG00000017055	Tnrc6c	89	80.858	ENSFALG00000000848	TNRC6C	100	80.971	Ficedula_albicollis
ENSJJAG00000017055	Tnrc6c	91	88.819	ENSFDAG00000010368	TNRC6C	100	89.622	Fukomys_damarensis
ENSJJAG00000017055	Tnrc6c	96	45.623	ENSFHEG00000002936	tnrc6c1	99	46.985	Fundulus_heteroclitus
ENSJJAG00000017055	Tnrc6c	93	82.044	ENSGALG00000001725	TNRC6C	100	84.838	Gallus_gallus
ENSJJAG00000017055	Tnrc6c	99	47.265	ENSGAFG00000019019	tnrc6c1	99	48.567	Gambusia_affinis
ENSJJAG00000017055	Tnrc6c	71	53.248	ENSGACG00000012320	tnrc6c1	97	47.577	Gasterosteus_aculeatus
ENSJJAG00000017055	Tnrc6c	92	83.390	ENSGAGG00000022043	TNRC6C	99	83.268	Gopherus_agassizii
ENSJJAG00000017055	Tnrc6c	99	86.479	ENSGGOG00000011304	TNRC6C	100	88.104	Gorilla_gorilla
ENSJJAG00000017055	Tnrc6c	93	50.541	ENSHBUG00000010846	tnrc6c1	97	52.516	Haplochromis_burtoni
ENSJJAG00000017055	Tnrc6c	99	88.641	ENSHGLG00000004809	TNRC6C	99	88.747	Heterocephalus_glaber_female
ENSJJAG00000017055	Tnrc6c	99	88.747	ENSHGLG00100012597	TNRC6C	99	88.907	Heterocephalus_glaber_male
ENSJJAG00000017055	Tnrc6c	99	51.358	ENSIPUG00000000818	tnrc6c1	97	52.305	Ictalurus_punctatus
ENSJJAG00000017055	Tnrc6c	99	89.443	ENSSTOG00000009101	TNRC6C	100	89.404	Ictidomys_tridecemlineatus
ENSJJAG00000017055	Tnrc6c	99	45.350	ENSKMAG00000021023	tnrc6c1	97	50.593	Kryptolebias_marmoratus
ENSJJAG00000017055	Tnrc6c	91	72.320	ENSLACG00000015283	TNRC6C	100	72.547	Latimeria_chalumnae
ENSJJAG00000017055	Tnrc6c	99	68.694	ENSLOCG00000013377	tnrc6c1	99	55.938	Lepisosteus_oculatus
ENSJJAG00000017055	Tnrc6c	99	86.585	ENSLAFG00000011122	TNRC6C	99	87.361	Loxodonta_africana
ENSJJAG00000017055	Tnrc6c	99	87.018	ENSMFAG00000043943	TNRC6C	100	88.922	Macaca_fascicularis
ENSJJAG00000017055	Tnrc6c	99	86.694	ENSMMUG00000011924	TNRC6C	100	88.922	Macaca_mulatta
ENSJJAG00000017055	Tnrc6c	99	87.045	ENSMNEG00000030405	TNRC6C	100	88.863	Macaca_nemestrina
ENSJJAG00000017055	Tnrc6c	99	87.097	ENSMLEG00000033436	TNRC6C	100	88.922	Mandrillus_leucophaeus
ENSJJAG00000017055	Tnrc6c	95	52.331	ENSMAMG00000023613	tnrc6c1	99	47.657	Mastacembelus_armatus
ENSJJAG00000017055	Tnrc6c	93	50.916	ENSMZEG00005010920	tnrc6c1	97	52.221	Maylandia_zebra
ENSJJAG00000017055	Tnrc6c	93	83.012	ENSMGAG00000003906	TNRC6C	100	75.583	Meleagris_gallopavo
ENSJJAG00000017055	Tnrc6c	89	90.947	ENSMAUG00000021618	Tnrc6c	100	91.420	Mesocricetus_auratus
ENSJJAG00000017055	Tnrc6c	99	87.201	ENSMICG00000003952	TNRC6C	100	89.570	Microcebus_murinus
ENSJJAG00000017055	Tnrc6c	99	91.219	ENSMOCG00000015879	Tnrc6c	100	91.667	Microtus_ochrogaster
ENSJJAG00000017055	Tnrc6c	70	55.187	ENSMMOG00000005203	tnrc6c1	100	50.028	Mola_mola
ENSJJAG00000017055	Tnrc6c	99	82.599	ENSMODG00000001785	TNRC6C	99	82.440	Monodelphis_domestica
ENSJJAG00000017055	Tnrc6c	99	90.740	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	91.437	Mus_caroli
ENSJJAG00000017055	Tnrc6c	99	90.580	ENSMUSG00000025571	Tnrc6c	100	91.264	Mus_musculus
ENSJJAG00000017055	Tnrc6c	99	90.580	MGP_PahariEiJ_G0018593	Tnrc6c	100	91.264	Mus_pahari
ENSJJAG00000017055	Tnrc6c	99	90.633	MGP_SPRETEiJ_G0018309	Tnrc6c	100	91.322	Mus_spretus
ENSJJAG00000017055	Tnrc6c	99	84.320	ENSMPUG00000013348	TNRC6C	98	84.200	Mustela_putorius_furo
ENSJJAG00000017055	Tnrc6c	99	80.309	ENSMLUG00000014431	TNRC6C	98	80.392	Myotis_lucifugus
ENSJJAG00000017055	Tnrc6c	99	91.325	ENSNGAG00000012203	Tnrc6c	99	91.432	Nannospalax_galili
ENSJJAG00000017055	Tnrc6c	92	51.399	ENSNBRG00000005344	tnrc6c1	97	52.860	Neolamprologus_brichardi
ENSJJAG00000017055	Tnrc6c	98	84.439	ENSNLEG00000000047	TNRC6C	99	84.334	Nomascus_leucogenys
ENSJJAG00000017055	Tnrc6c	89	76.860	ENSMEUG00000005104	TNRC6C	100	77.036	Notamacropus_eugenii
ENSJJAG00000017055	Tnrc6c	89	89.374	ENSODEG00000012499	TNRC6C	100	90.083	Octodon_degus
ENSJJAG00000017055	Tnrc6c	80	52.848	ENSONIG00000002210	tnrc6c1	95	55.431	Oreochromis_niloticus
ENSJJAG00000017055	Tnrc6c	99	61.036	ENSOANG00000009758	-	100	61.338	Ornithorhynchus_anatinus
ENSJJAG00000017055	Tnrc6c	85	77.225	ENSOCUG00000006122	TNRC6C	96	76.523	Oryctolagus_cuniculus
ENSJJAG00000017055	Tnrc6c	93	46.968	ENSORLG00000009837	tnrc6c1	100	66.543	Oryzias_latipes
ENSJJAG00000017055	Tnrc6c	93	45.981	ENSORLG00020016510	tnrc6c1	100	48.554	Oryzias_latipes_hni
ENSJJAG00000017055	Tnrc6c	76	42.205	ENSORLG00015000171	tnrc6c1	98	43.975	Oryzias_latipes_hsok
ENSJJAG00000017055	Tnrc6c	93	47.218	ENSOMEG00000000357	tnrc6c1	99	47.838	Oryzias_melastigma
ENSJJAG00000017055	Tnrc6c	89	86.267	ENSOGAG00000007197	TNRC6C	100	86.613	Otolemur_garnettii
ENSJJAG00000017055	Tnrc6c	95	80.955	ENSOARG00000006041	TNRC6C	97	81.247	Ovis_aries
ENSJJAG00000017055	Tnrc6c	99	86.802	ENSPPAG00000027160	TNRC6C	100	88.627	Pan_paniscus
ENSJJAG00000017055	Tnrc6c	99	83.853	ENSPPRG00000018881	TNRC6C	100	86.361	Panthera_pardus
ENSJJAG00000017055	Tnrc6c	90	75.883	ENSPTIG00000008791	TNRC6C	90	78.610	Panthera_tigris_altaica
ENSJJAG00000017055	Tnrc6c	99	86.889	ENSPTRG00000009699	TNRC6C	100	88.627	Pan_troglodytes
ENSJJAG00000017055	Tnrc6c	99	87.097	ENSPANG00000019994	TNRC6C	100	89.079	Papio_anubis
ENSJJAG00000017055	Tnrc6c	52	61.379	ENSPKIG00000005428	tnrc6c1	100	50.472	Paramormyrops_kingsleyae
ENSJJAG00000017055	Tnrc6c	91	82.073	ENSPSIG00000018069	TNRC6C	100	82.245	Pelodiscus_sinensis
ENSJJAG00000017055	Tnrc6c	58	54.409	ENSPMGG00000022911	tnrc6c1	97	62.753	Periophthalmus_magnuspinnatus
ENSJJAG00000017055	Tnrc6c	99	91.006	ENSPEMG00000009785	Tnrc6c	99	91.219	Peromyscus_maniculatus_bairdii
ENSJJAG00000017055	Tnrc6c	51	81.050	ENSPCIG00000017421	-	99	81.050	Phascolarctos_cinereus
ENSJJAG00000017055	Tnrc6c	96	48.069	ENSPFOG00000012560	tnrc6c1	98	54.348	Poecilia_formosa
ENSJJAG00000017055	Tnrc6c	86	49.686	ENSPLAG00000021055	tnrc6c1	97	49.971	Poecilia_latipinna
ENSJJAG00000017055	Tnrc6c	99	86.642	ENSPPYG00000008679	TNRC6C	98	86.681	Pongo_abelii
ENSJJAG00000017055	Tnrc6c	85	91.943	ENSPCAG00000012510	TNRC6C	94	91.943	Procavia_capensis
ENSJJAG00000017055	Tnrc6c	89	89.452	ENSPCOG00000021451	TNRC6C	100	89.747	Propithecus_coquereli
ENSJJAG00000017055	Tnrc6c	88	86.027	ENSPVAG00000002008	TNRC6C	95	86.111	Pteropus_vampyrus
ENSJJAG00000017055	Tnrc6c	89	50.102	ENSPNYG00000014477	tnrc6c1	98	51.037	Pundamilia_nyererei
ENSJJAG00000017055	Tnrc6c	89	91.312	ENSRNOG00000022395	Tnrc6c	100	91.430	Rattus_norvegicus
ENSJJAG00000017055	Tnrc6c	99	86.750	ENSRBIG00000027777	TNRC6C	100	88.568	Rhinopithecus_bieti
ENSJJAG00000017055	Tnrc6c	99	86.837	ENSRROG00000042912	TNRC6C	100	88.627	Rhinopithecus_roxellana
ENSJJAG00000017055	Tnrc6c	99	86.841	ENSSBOG00000023981	TNRC6C	100	86.613	Saimiri_boliviensis_boliviensis
ENSJJAG00000017055	Tnrc6c	60	56.137	ENSSFOG00015004735	-	99	59.791	Scleropages_formosus
ENSJJAG00000017055	Tnrc6c	93	46.885	ENSSMAG00000012761	tnrc6c1	84	54.666	Scophthalmus_maximus
ENSJJAG00000017055	Tnrc6c	93	48.592	ENSSDUG00000002366	tnrc6c1	99	49.327	Seriola_dumerili
ENSJJAG00000017055	Tnrc6c	83	49.204	ENSSLDG00000025613	tnrc6c1	97	49.688	Seriola_lalandi_dorsalis
ENSJJAG00000017055	Tnrc6c	83	89.655	ENSSARG00000006816	TNRC6C	91	89.427	Sorex_araneus
ENSJJAG00000017055	Tnrc6c	80	81.458	ENSSPUG00000007341	TNRC6C	98	81.597	Sphenodon_punctatus
ENSJJAG00000017055	Tnrc6c	70	53.136	ENSSPAG00000014977	tnrc6c1	98	48.176	Stegastes_partitus
ENSJJAG00000017055	Tnrc6c	89	83.068	ENSSSCG00000034373	TNRC6C	100	83.540	Sus_scrofa
ENSJJAG00000017055	Tnrc6c	91	84.105	ENSTGUG00000007733	TNRC6C	100	84.277	Taeniopygia_guttata
ENSJJAG00000017055	Tnrc6c	87	52.698	ENSTRUG00000011685	tnrc6c1	82	52.888	Takifugu_rubripes
ENSJJAG00000017055	Tnrc6c	88	54.454	ENSTNIG00000005273	tnrc6c1	100	59.299	Tetraodon_nigroviridis
ENSJJAG00000017055	Tnrc6c	57	90.234	ENSTBEG00000005046	TNRC6C	99	81.190	Tupaia_belangeri
ENSJJAG00000017055	Tnrc6c	91	86.507	ENSTTRG00000010828	TNRC6C	99	86.907	Tursiops_truncatus
ENSJJAG00000017055	Tnrc6c	99	85.283	ENSUMAG00000013614	TNRC6C	99	85.927	Ursus_maritimus
ENSJJAG00000017055	Tnrc6c	89	88.502	ENSVVUG00000015268	TNRC6C	100	88.561	Vulpes_vulpes
ENSJJAG00000017055	Tnrc6c	89	73.099	ENSXETG00000019470	tnrc6c	100	72.749	Xenopus_tropicalis
ENSJJAG00000017055	Tnrc6c	99	47.114	ENSXMAG00000025971	tnrc6c1	99	49.974	Xiphophorus_maculatus