EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000017154 (Gene tree)
Gene ID: 101600124
Gene Symbol: Trmt1
Alias: 6720406L13Rik|D8Ertd812e
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 8826 bases
Position: chrJH725630.1:478774-487599
Accession: 101600124
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000014813	zf-CCCH	PF00642.24	6.1e-06	1	1
ENSJJAP00000014811	zf-CCCH	PF00642.24	6.3e-06	1	1
ENSJJAP00000014811	TRM	PF02005.16	4.4e-148	1	1
ENSJJAP00000014813	TRM	PF02005.16	4.8e-139	1	1
ENSJJAP00000014813	Met_10	PF02475.16	2.2e-05	1	1
ENSJJAP00000014811	Met_10	PF02475.16	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000021316	-	1878	-	ENSJJAP00000014813	625 (aa)	-	-
ENSJJAT00000021314	-	1965	XM_012952210	ENSJJAP00000014811	654 (aa)	XP_012807664	-

Gene Model

Click here to download ENSJJAG00000017154's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000017154's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000017154	Trmt1	97	84.268	ENSG00000104907	TRMT1	100	91.099	Homo_sapiens
ENSJJAG00000017154	Trmt1	100	80.873	ENSAMEG00000012598	TRMT1	93	82.830	Ailuropoda_melanoleuca
ENSJJAG00000017154	Trmt1	91	57.591	ENSACIG00000018680	trmt1	93	57.686	Amphilophus_citrinellus
ENSJJAG00000017154	Trmt1	90	64.915	ENSAOCG00000006781	trmt1	86	65.690	Amphiprion_ocellaris
ENSJJAG00000017154	Trmt1	89	65.523	ENSAPEG00000007712	trmt1	86	65.862	Amphiprion_percula
ENSJJAG00000017154	Trmt1	88	67.888	ENSATEG00000001872	trmt1	84	67.888	Anabas_testudineus
ENSJJAG00000017154	Trmt1	91	65.494	ENSACAG00000003825	TRMT1	95	65.494	Anolis_carolinensis
ENSJJAG00000017154	Trmt1	94	82.714	ENSANAG00000023016	TRMT1	95	84.772	Aotus_nancymaae
ENSJJAG00000017154	Trmt1	88	63.874	ENSACLG00000010073	trmt1	92	63.874	Astatotilapia_calliptera
ENSJJAG00000017154	Trmt1	88	66.667	ENSAMXG00000012026	trmt1	85	66.667	Astyanax_mexicanus
ENSJJAG00000017154	Trmt1	100	80.572	ENSBTAG00000019325	TRMT1	89	82.989	Bos_taurus
ENSJJAG00000017154	Trmt1	78	40.344	WBGene00006613	trm-1	93	40.344	Caenorhabditis_elegans
ENSJJAG00000017154	Trmt1	94	80.435	ENSCJAG00000004566	TRMT1	95	80.776	Callithrix_jacchus
ENSJJAG00000017154	Trmt1	100	81.627	ENSCAFG00000017070	TRMT1	92	86.633	Canis_familiaris
ENSJJAG00000017154	Trmt1	100	81.575	ENSCAFG00020005397	TRMT1	94	83.500	Canis_lupus_dingo
ENSJJAG00000017154	Trmt1	100	80.301	ENSCHIG00000013569	TRMT1	95	82.698	Capra_hircus
ENSJJAG00000017154	Trmt1	97	77.640	ENSTSYG00000003207	TRMT1	94	79.089	Carlito_syrichta
ENSJJAG00000017154	Trmt1	86	77.679	ENSCAPG00000003355	TRMT1	97	78.018	Cavia_aperea
ENSJJAG00000017154	Trmt1	99	78.440	ENSCPOG00000011754	TRMT1	98	78.737	Cavia_porcellus
ENSJJAG00000017154	Trmt1	99	78.671	ENSCCAG00000022263	TRMT1	95	82.910	Cebus_capucinus
ENSJJAG00000017154	Trmt1	100	81.900	ENSCATG00000039850	TRMT1	95	84.261	Cercocebus_atys
ENSJJAG00000017154	Trmt1	86	68.789	ENSCATG00000038220	-	93	75.556	Cercocebus_atys
ENSJJAG00000017154	Trmt1	98	81.664	ENSCLAG00000015295	TRMT1	93	83.121	Chinchilla_lanigera
ENSJJAG00000017154	Trmt1	80	82.707	ENSCSAG00000006500	TRMT1	100	82.707	Chlorocebus_sabaeus
ENSJJAG00000017154	Trmt1	92	67.097	ENSCPBG00000023866	TRMT1	92	67.097	Chrysemys_picta_bellii
ENSJJAG00000017154	Trmt1	84	46.043	ENSCING00000002884	-	97	46.043	Ciona_intestinalis
ENSJJAG00000017154	Trmt1	84	46.583	ENSCSAVG00000010927	-	99	46.630	Ciona_savignyi
ENSJJAG00000017154	Trmt1	98	67.176	ENSCANG00000040631	TRMT1	94	68.387	Colobus_angolensis_palliatus
ENSJJAG00000017154	Trmt1	95	65.169	ENSCANG00000031650	-	92	65.890	Colobus_angolensis_palliatus
ENSJJAG00000017154	Trmt1	100	80.063	ENSCGRG00001022594	Trmt1	94	82.500	Cricetulus_griseus_chok1gshd
ENSJJAG00000017154	Trmt1	100	80.063	ENSCGRG00000017732	Trmt1	94	82.500	Cricetulus_griseus_crigri
ENSJJAG00000017154	Trmt1	88	66.318	ENSCSEG00000001643	trmt1	84	68.217	Cynoglossus_semilaevis
ENSJJAG00000017154	Trmt1	92	63.306	ENSCVAG00000011886	trmt1	89	63.880	Cyprinodon_variegatus
ENSJJAG00000017154	Trmt1	93	62.399	ENSDARG00000010978	trmt1	89	63.562	Danio_rerio
ENSJJAG00000017154	Trmt1	85	58.897	ENSDNOG00000048240	-	89	59.659	Dasypus_novemcinctus
ENSJJAG00000017154	Trmt1	99	80.063	ENSDORG00000014298	Trmt1	94	82.047	Dipodomys_ordii
ENSJJAG00000017154	Trmt1	78	49.421	FBgn0032430	CG6388	87	49.421	Drosophila_melanogaster
ENSJJAG00000017154	Trmt1	79	53.743	ENSEBUG00000003449	trmt1	75	53.817	Eptatretus_burgeri
ENSJJAG00000017154	Trmt1	94	82.602	ENSEASG00005004050	TRMT1	93	84.175	Equus_asinus_asinus
ENSJJAG00000017154	Trmt1	94	82.305	ENSECAG00000016149	TRMT1	93	84.343	Equus_caballus
ENSJJAG00000017154	Trmt1	61	71.788	ENSEEUG00000014102	-	100	71.788	Erinaceus_europaeus
ENSJJAG00000017154	Trmt1	88	65.695	ENSELUG00000021659	trmt1	85	65.921	Esox_lucius
ENSJJAG00000017154	Trmt1	99	81.527	ENSFCAG00000000483	TRMT1	94	83.548	Felis_catus
ENSJJAG00000017154	Trmt1	99	78.989	ENSFDAG00000007386	TRMT1	95	81.333	Fukomys_damarensis
ENSJJAG00000017154	Trmt1	82	68.140	ENSFHEG00000012865	trmt1	90	67.956	Fundulus_heteroclitus
ENSJJAG00000017154	Trmt1	88	59.756	ENSGMOG00000006564	trmt1	98	60.279	Gadus_morhua
ENSJJAG00000017154	Trmt1	92	64.151	ENSGAFG00000011862	trmt1	93	65.104	Gambusia_affinis
ENSJJAG00000017154	Trmt1	92	61.184	ENSGACG00000000227	trmt1	97	61.311	Gasterosteus_aculeatus
ENSJJAG00000017154	Trmt1	93	66.188	ENSGAGG00000016432	TRMT1	92	66.613	Gopherus_agassizii
ENSJJAG00000017154	Trmt1	95	85.216	ENSGGOG00000014007	TRMT1	94	85.806	Gorilla_gorilla
ENSJJAG00000017154	Trmt1	87	57.042	ENSHBUG00000008821	trmt1	93	57.042	Haplochromis_burtoni
ENSJJAG00000017154	Trmt1	99	79.331	ENSHGLG00000015972	TRMT1	95	81.369	Heterocephalus_glaber_female
ENSJJAG00000017154	Trmt1	99	73.768	ENSHGLG00100018112	TRMT1	95	75.626	Heterocephalus_glaber_male
ENSJJAG00000017154	Trmt1	88	63.066	ENSHCOG00000009447	trmt1	88	62.827	Hippocampus_comes
ENSJJAG00000017154	Trmt1	88	65.529	ENSIPUG00000002899	trmt1	85	65.411	Ictalurus_punctatus
ENSJJAG00000017154	Trmt1	100	81.102	ENSSTOG00000012531	TRMT1	95	82.830	Ictidomys_tridecemlineatus
ENSJJAG00000017154	Trmt1	89	66.099	ENSKMAG00000011809	trmt1	97	64.615	Kryptolebias_marmoratus
ENSJJAG00000017154	Trmt1	88	66.957	ENSLBEG00000012703	trmt1	84	67.016	Labrus_bergylta
ENSJJAG00000017154	Trmt1	88	56.995	ENSLACG00000014585	TRMT1	93	57.019	Latimeria_chalumnae
ENSJJAG00000017154	Trmt1	88	63.293	ENSLOCG00000006479	trmt1	97	63.465	Lepisosteus_oculatus
ENSJJAG00000017154	Trmt1	98	80.462	ENSLAFG00000014072	TRMT1	95	83.065	Loxodonta_africana
ENSJJAG00000017154	Trmt1	100	82.229	ENSMFAG00000033143	TRMT1	95	84.420	Macaca_fascicularis
ENSJJAG00000017154	Trmt1	99	79.167	ENSMMUG00000001167	TRMT1	94	81.525	Macaca_mulatta
ENSJJAG00000017154	Trmt1	100	82.051	ENSMNEG00000037867	TRMT1	95	84.420	Macaca_nemestrina
ENSJJAG00000017154	Trmt1	99	82.720	ENSMLEG00000016142	TRMT1	94	85.279	Mandrillus_leucophaeus
ENSJJAG00000017154	Trmt1	89	67.354	ENSMAMG00000004357	trmt1	86	67.298	Mastacembelus_armatus
ENSJJAG00000017154	Trmt1	88	64.223	ENSMZEG00005014510	trmt1	85	64.223	Maylandia_zebra
ENSJJAG00000017154	Trmt1	96	80.960	ENSMAUG00000011134	Trmt1	94	81.000	Mesocricetus_auratus
ENSJJAG00000017154	Trmt1	100	82.078	ENSMICG00000000793	TRMT1	95	84.102	Microcebus_murinus
ENSJJAG00000017154	Trmt1	98	81.231	ENSMOCG00000015895	Trmt1	94	83.067	Microtus_ochrogaster
ENSJJAG00000017154	Trmt1	88	65.391	ENSMMOG00000011097	trmt1	92	65.445	Mola_mola
ENSJJAG00000017154	Trmt1	91	74.958	ENSMODG00000011619	TRMT1	95	75.294	Monodelphis_domestica
ENSJJAG00000017154	Trmt1	100	79.969	MGP_CAROLIEiJ_G0031304	Trmt1	94	82.667	Mus_caroli
ENSJJAG00000017154	Trmt1	100	80.125	ENSMUSG00000001909	Trmt1	94	82.333	Mus_musculus
ENSJJAG00000017154	Trmt1	100	79.969	MGP_SPRETEiJ_G0032422	Trmt1	94	82.333	Mus_spretus
ENSJJAG00000017154	Trmt1	100	81.928	ENSMPUG00000004210	TRMT1	90	83.784	Mustela_putorius_furo
ENSJJAG00000017154	Trmt1	100	80.422	ENSMLUG00000012809	TRMT1	93	82.643	Myotis_lucifugus
ENSJJAG00000017154	Trmt1	95	82.381	ENSNGAG00000022486	Trmt1	89	85.689	Nannospalax_galili
ENSJJAG00000017154	Trmt1	76	67.964	ENSNBRG00000024376	trmt1	85	67.964	Neolamprologus_brichardi
ENSJJAG00000017154	Trmt1	79	88.304	ENSNLEG00000013019	-	92	91.250	Nomascus_leucogenys
ENSJJAG00000017154	Trmt1	91	73.869	ENSMEUG00000013756	TRMT1	99	74.199	Notamacropus_eugenii
ENSJJAG00000017154	Trmt1	81	83.258	ENSOPRG00000009471	-	78	87.348	Ochotona_princeps
ENSJJAG00000017154	Trmt1	98	81.442	ENSODEG00000010323	TRMT1	95	83.280	Octodon_degus
ENSJJAG00000017154	Trmt1	91	64.628	ENSONIG00000000400	trmt1	94	65.372	Oreochromis_niloticus
ENSJJAG00000017154	Trmt1	79	82.792	ENSOCUG00000021934	TRMT1	98	82.792	Oryctolagus_cuniculus
ENSJJAG00000017154	Trmt1	88	62.969	ENSORLG00000020074	trmt1	90	62.969	Oryzias_latipes
ENSJJAG00000017154	Trmt1	88	65.913	ENSORLG00020007561	trmt1	89	65.505	Oryzias_latipes_hni
ENSJJAG00000017154	Trmt1	88	66.261	ENSORLG00015006547	trmt1	86	66.261	Oryzias_latipes_hsok
ENSJJAG00000017154	Trmt1	88	65.969	ENSOMEG00000019343	trmt1	86	65.969	Oryzias_melastigma
ENSJJAG00000017154	Trmt1	93	82.276	ENSOGAG00000025576	TRMT1	93	83.612	Otolemur_garnettii
ENSJJAG00000017154	Trmt1	100	68.224	ENSOARG00000009397	TRMT1	89	68.710	Ovis_aries
ENSJJAG00000017154	Trmt1	98	73.760	ENSPPRG00000012117	TRMT1	94	75.365	Panthera_pardus
ENSJJAG00000017154	Trmt1	80	80.899	ENSPTIG00000008833	TRMT1	91	88.811	Panthera_tigris_altaica
ENSJJAG00000017154	Trmt1	95	64.172	ENSPTRG00000050421	-	89	64.924	Pan_troglodytes
ENSJJAG00000017154	Trmt1	95	85.382	ENSPTRG00000010557	TRMT1	94	85.968	Pan_troglodytes
ENSJJAG00000017154	Trmt1	85	69.710	ENSPANG00000034058	-	90	77.500	Papio_anubis
ENSJJAG00000017154	Trmt1	99	83.200	ENSPANG00000009247	TRMT1	94	85.161	Papio_anubis
ENSJJAG00000017154	Trmt1	88	66.899	ENSPKIG00000005309	trmt1	84	66.899	Paramormyrops_kingsleyae
ENSJJAG00000017154	Trmt1	91	57.492	ENSPSIG00000008762	TRMT1	85	58.347	Pelodiscus_sinensis
ENSJJAG00000017154	Trmt1	88	65.969	ENSPMGG00000019764	trmt1	90	66.143	Periophthalmus_magnuspinnatus
ENSJJAG00000017154	Trmt1	98	82.372	ENSPEMG00000016247	Trmt1	94	84.167	Peromyscus_maniculatus_bairdii
ENSJJAG00000017154	Trmt1	87	60.526	ENSPMAG00000004329	trmt1	89	60.526	Petromyzon_marinus
ENSJJAG00000017154	Trmt1	93	72.052	ENSPCIG00000019273	TRMT1	94	72.476	Phascolarctos_cinereus
ENSJJAG00000017154	Trmt1	90	66.610	ENSPFOG00000008527	trmt1	89	67.238	Poecilia_formosa
ENSJJAG00000017154	Trmt1	90	66.102	ENSPLAG00000018788	trmt1	89	69.187	Poecilia_latipinna
ENSJJAG00000017154	Trmt1	96	63.636	ENSPMEG00000013120	trmt1	97	64.184	Poecilia_mexicana
ENSJJAG00000017154	Trmt1	95	63.233	ENSPREG00000000211	trmt1	94	63.550	Poecilia_reticulata
ENSJJAG00000017154	Trmt1	95	85.103	ENSPPYG00000009622	TRMT1	94	85.806	Pongo_abelii
ENSJJAG00000017154	Trmt1	97	73.879	ENSPCAG00000003698	TRMT1	95	75.323	Procavia_capensis
ENSJJAG00000017154	Trmt1	99	83.227	ENSPCOG00000008653	TRMT1	94	85.000	Propithecus_coquereli
ENSJJAG00000017154	Trmt1	99	80.611	ENSPVAG00000015076	TRMT1	94	82.553	Pteropus_vampyrus
ENSJJAG00000017154	Trmt1	88	62.129	ENSPNYG00000013960	trmt1	92	62.129	Pundamilia_nyererei
ENSJJAG00000017154	Trmt1	81	68.201	ENSPNAG00000024859	trmt1	88	68.201	Pygocentrus_nattereri
ENSJJAG00000017154	Trmt1	95	82.063	ENSRNOG00000002914	Trmt1	92	85.110	Rattus_norvegicus
ENSJJAG00000017154	Trmt1	95	65.440	ENSRBIG00000037505	-	93	66.169	Rhinopithecus_bieti
ENSJJAG00000017154	Trmt1	100	81.777	ENSRBIG00000038324	TRMT1	95	83.784	Rhinopithecus_bieti
ENSJJAG00000017154	Trmt1	95	64.960	ENSRROG00000031847	-	92	65.672	Rhinopithecus_roxellana
ENSJJAG00000017154	Trmt1	100	81.928	ENSRROG00000028599	TRMT1	95	83.943	Rhinopithecus_roxellana
ENSJJAG00000017154	Trmt1	78	37.778	YDR120C	-	92	37.778	Saccharomyces_cerevisiae
ENSJJAG00000017154	Trmt1	99	80.128	ENSSBOG00000028861	TRMT1	95	83.756	Saimiri_boliviensis_boliviensis
ENSJJAG00000017154	Trmt1	93	73.684	ENSSHAG00000014381	TRMT1	94	75.722	Sarcophilus_harrisii
ENSJJAG00000017154	Trmt1	88	66.492	ENSSFOG00015004139	trmt1	87	64.874	Scleropages_formosus
ENSJJAG00000017154	Trmt1	88	65.625	ENSSMAG00000021136	trmt1	87	64.626	Scophthalmus_maximus
ENSJJAG00000017154	Trmt1	88	66.667	ENSSDUG00000012740	trmt1	84	66.667	Seriola_dumerili
ENSJJAG00000017154	Trmt1	88	66.492	ENSSLDG00000005971	trmt1	84	66.492	Seriola_lalandi_dorsalis
ENSJJAG00000017154	Trmt1	85	80.639	ENSSARG00000005138	TRMT1	99	80.639	Sorex_araneus
ENSJJAG00000017154	Trmt1	92	52.152	ENSSPUG00000001084	TRMT1	94	52.303	Sphenodon_punctatus
ENSJJAG00000017154	Trmt1	90	63.025	ENSSPAG00000007153	trmt1	96	63.761	Stegastes_partitus
ENSJJAG00000017154	Trmt1	96	84.152	ENSSSCG00000013744	TRMT1	93	86.745	Sus_scrofa
ENSJJAG00000017154	Trmt1	91	59.121	ENSTRUG00000010700	trmt1	92	59.283	Takifugu_rubripes
ENSJJAG00000017154	Trmt1	88	65.217	ENSTNIG00000018808	trmt1	98	65.217	Tetraodon_nigroviridis
ENSJJAG00000017154	Trmt1	98	78.549	ENSTTRG00000006379	TRMT1	94	80.645	Tursiops_truncatus
ENSJJAG00000017154	Trmt1	98	81.776	ENSUAMG00000022911	TRMT1	96	82.287	Ursus_americanus
ENSJJAG00000017154	Trmt1	95	83.121	ENSUMAG00000006027	TRMT1	93	85.160	Ursus_maritimus
ENSJJAG00000017154	Trmt1	100	81.777	ENSVVUG00000024177	TRMT1	95	83.625	Vulpes_vulpes
ENSJJAG00000017154	Trmt1	71	69.528	ENSXETG00000033863	TRMT1	92	69.528	Xenopus_tropicalis
ENSJJAG00000017154	Trmt1	92	64.379	ENSXCOG00000015733	trmt1	93	65.289	Xiphophorus_couchianus
ENSJJAG00000017154	Trmt1	88	66.551	ENSXMAG00000013823	trmt1	97	67.663	Xiphophorus_maculatus