EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000017385 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein F-like
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 1246 bases
Position: chrJH725547.1:1777117-1778362
Accession: 101617650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000015126	zf-RNPHF	PF08080.12	4.4e-17	1	1
ENSJJAP00000015126	RRM_1	PF00076.22	1.2e-25	1	2
ENSJJAP00000015126	RRM_1	PF00076.22	1.2e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000021630	-	1224	XM_012951086	ENSJJAP00000015126	407 (aa)	XP_012806540	-

Gene Model

Click here to download ENSJJAG00000017385's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000017385's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000017385	-	100	69.378	ENSJJAG00000000554	-	100	69.378
ENSJJAG00000017385	-	99	68.765	ENSJJAG00000016203	Hnrnph1	97	67.816
ENSJJAG00000017385	-	52	66.942	ENSJJAG00000022736	-	92	52.795
ENSJJAG00000017385	-	98	85.484	ENSJJAG00000014334	-	99	85.484
ENSJJAG00000017385	-	81	52.711	ENSJJAG00000009857	-	95	53.916
ENSJJAG00000017385	-	100	80.344	ENSJJAG00000022288	-	100	80.344
ENSJJAG00000017385	-	100	57.701	ENSJJAG00000016174	-	96	57.241
ENSJJAG00000017385	-	100	61.916	ENSJJAG00000014424	-	100	61.916
ENSJJAG00000017385	-	86	41.667	ENSJJAG00000005325	Grsf1	97	45.926
ENSJJAG00000017385	-	96	65.947	ENSJJAG00000004850	-	97	65.747

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000017385	-	100	88.193	ENSG00000169813	HNRNPF	100	93.878	Homo_sapiens
ENSJJAG00000017385	-	100	86.988	ENSAMEG00000018983	HNRNPF	100	86.988	Ailuropoda_melanoleuca
ENSJJAG00000017385	-	88	74.595	ENSANAG00000033452	-	89	74.595	Aotus_nancymaae
ENSJJAG00000017385	-	100	85.783	ENSANAG00000033285	-	100	85.783	Aotus_nancymaae
ENSJJAG00000017385	-	100	86.988	ENSBTAG00000008853	HNRNPF	100	86.988	Bos_taurus
ENSJJAG00000017385	-	100	70.644	ENSBTAG00000020513	-	100	70.644	Bos_taurus
ENSJJAG00000017385	-	100	88.675	ENSCJAG00000008291	HNRNPF	100	88.675	Callithrix_jacchus
ENSJJAG00000017385	-	100	86.988	ENSCAFG00000007044	HNRNPF	100	86.988	Canis_familiaris
ENSJJAG00000017385	-	100	86.988	ENSCHIG00000006714	HNRNPF	100	86.988	Capra_hircus
ENSJJAG00000017385	-	100	63.333	ENSCHIG00000022971	-	100	63.333	Capra_hircus
ENSJJAG00000017385	-	100	75.481	ENSTSYG00000002112	-	100	75.481	Carlito_syrichta
ENSJJAG00000017385	-	100	87.952	ENSTSYG00000030439	-	100	87.952	Carlito_syrichta
ENSJJAG00000017385	-	99	87.923	ENSCAPG00000011521	HNRNPF	99	87.923	Cavia_aperea
ENSJJAG00000017385	-	99	87.923	ENSCPOG00000003678	HNRNPF	99	87.923	Cavia_porcellus
ENSJJAG00000017385	-	100	73.105	ENSCCAG00000028687	-	100	73.105	Cebus_capucinus
ENSJJAG00000017385	-	100	88.434	ENSCCAG00000031457	-	100	88.434	Cebus_capucinus
ENSJJAG00000017385	-	99	87.923	ENSCLAG00000005161	HNRNPF	99	87.923	Chinchilla_lanigera
ENSJJAG00000017385	-	100	86.988	ENSCANG00000003086	-	100	86.988	Colobus_angolensis_palliatus
ENSJJAG00000017385	-	100	89.157	ENSCGRG00001016276	Hnrnpf	100	89.157	Cricetulus_griseus_chok1gshd
ENSJJAG00000017385	-	94	66.667	ENSCGRG00001016206	-	88	66.667	Cricetulus_griseus_chok1gshd
ENSJJAG00000017385	-	100	84.337	ENSDNOG00000030849	-	100	84.337	Dasypus_novemcinctus
ENSJJAG00000017385	-	100	82.651	ENSDORG00000008260	-	100	82.651	Dipodomys_ordii
ENSJJAG00000017385	-	100	87.711	ENSDORG00000024298	-	100	87.711	Dipodomys_ordii
ENSJJAG00000017385	-	100	80.964	ENSDORG00000005431	-	100	80.964	Dipodomys_ordii
ENSJJAG00000017385	-	100	85.542	ENSDORG00000024936	-	100	85.542	Dipodomys_ordii
ENSJJAG00000017385	-	100	86.747	ENSEASG00005006903	HNRNPF	100	86.747	Equus_asinus_asinus
ENSJJAG00000017385	-	100	83.373	ENSECAG00000003229	HNRNPF	100	83.373	Equus_caballus
ENSJJAG00000017385	-	100	86.988	ENSFCAG00000028219	-	100	86.988	Felis_catus
ENSJJAG00000017385	-	95	80.916	ENSFDAG00000007858	-	98	80.916	Fukomys_damarensis
ENSJJAG00000017385	-	99	87.923	ENSFDAG00000011431	-	99	87.923	Fukomys_damarensis
ENSJJAG00000017385	-	99	72.222	ENSFDAG00000015308	-	99	72.222	Fukomys_damarensis
ENSJJAG00000017385	-	90	88.032	ENSGGOG00000010867	HNRNPF	93	88.032	Gorilla_gorilla
ENSJJAG00000017385	-	100	85.542	ENSHGLG00000010276	-	100	85.542	Heterocephalus_glaber_female
ENSJJAG00000017385	-	90	84.574	ENSHGLG00000014139	-	97	84.574	Heterocephalus_glaber_female
ENSJJAG00000017385	-	99	79.952	ENSHGLG00000017607	-	100	79.952	Heterocephalus_glaber_female
ENSJJAG00000017385	-	99	88.164	ENSHGLG00000000147	-	99	88.164	Heterocephalus_glaber_female
ENSJJAG00000017385	-	95	82.071	ENSHGLG00100019910	-	100	82.071	Heterocephalus_glaber_male
ENSJJAG00000017385	-	99	85.266	ENSHGLG00100019558	-	100	85.266	Heterocephalus_glaber_male
ENSJJAG00000017385	-	90	78.723	ENSHGLG00100010905	-	97	78.723	Heterocephalus_glaber_male
ENSJJAG00000017385	-	97	87.376	ENSHGLG00100020825	-	100	87.376	Heterocephalus_glaber_male
ENSJJAG00000017385	-	99	85.990	ENSHGLG00100019572	-	99	85.990	Heterocephalus_glaber_male
ENSJJAG00000017385	-	100	79.808	ENSSTOG00000022853	-	100	79.808	Ictidomys_tridecemlineatus
ENSJJAG00000017385	-	100	87.952	ENSSTOG00000025560	-	100	87.952	Ictidomys_tridecemlineatus
ENSJJAG00000017385	-	100	77.751	ENSSTOG00000023820	-	100	77.751	Ictidomys_tridecemlineatus
ENSJJAG00000017385	-	99	85.301	ENSLAFG00000000424	HNRNPF	99	85.301	Loxodonta_africana
ENSJJAG00000017385	-	100	88.193	ENSMFAG00000021184	HNRNPF	100	88.193	Macaca_fascicularis
ENSJJAG00000017385	-	100	88.193	ENSMMUG00000020982	HNRNPF	100	88.193	Macaca_mulatta
ENSJJAG00000017385	-	100	88.193	ENSMLEG00000023515	HNRNPF	100	88.193	Mandrillus_leucophaeus
ENSJJAG00000017385	-	100	89.157	ENSMAUG00000007892	Hnrnpf	100	89.157	Mesocricetus_auratus
ENSJJAG00000017385	-	99	73.913	ENSMICG00000043739	-	99	73.913	Microcebus_murinus
ENSJJAG00000017385	-	99	73.397	ENSMICG00000044171	-	99	73.397	Microcebus_murinus
ENSJJAG00000017385	-	100	88.675	ENSMOCG00000014915	Hnrnpf	100	88.675	Microtus_ochrogaster
ENSJJAG00000017385	-	100	89.157	ENSMUSG00000042079	Hnrnpf	100	94.231	Mus_musculus
ENSJJAG00000017385	-	100	88.193	MGP_PahariEiJ_G0026903	-	100	88.193	Mus_pahari
ENSJJAG00000017385	-	96	87.469	ENSMPUG00000017283	HNRNPF	99	87.469	Mustela_putorius_furo
ENSJJAG00000017385	-	100	85.337	ENSMLUG00000007261	HNRNPF	100	85.337	Myotis_lucifugus
ENSJJAG00000017385	-	100	64.578	ENSNGAG00000009482	-	100	64.578	Nannospalax_galili
ENSJJAG00000017385	-	100	72.771	ENSNGAG00000014079	-	100	72.771	Nannospalax_galili
ENSJJAG00000017385	-	100	88.675	ENSNGAG00000010409	-	100	88.675	Nannospalax_galili
ENSJJAG00000017385	-	100	88.193	ENSNLEG00000019098	HNRNPF	100	88.193	Nomascus_leucogenys
ENSJJAG00000017385	-	99	81.796	ENSODEG00000002359	-	99	81.796	Octodon_degus
ENSJJAG00000017385	-	99	87.923	ENSODEG00000019266	-	99	87.923	Octodon_degus
ENSJJAG00000017385	-	100	83.614	ENSOCUG00000024604	-	100	83.614	Oryctolagus_cuniculus
ENSJJAG00000017385	-	100	87.952	ENSOCUG00000024719	-	100	87.952	Oryctolagus_cuniculus
ENSJJAG00000017385	-	99	81.928	ENSOGAG00000013734	-	99	81.928	Otolemur_garnettii
ENSJJAG00000017385	-	100	83.855	ENSOGAG00000030480	-	100	83.855	Otolemur_garnettii
ENSJJAG00000017385	-	100	73.350	ENSOARG00000016658	-	100	73.350	Ovis_aries
ENSJJAG00000017385	-	89	88.076	ENSOARG00000003995	HNRNPF	92	88.076	Ovis_aries
ENSJJAG00000017385	-	100	86.988	ENSPPRG00000021222	HNRNPF	100	86.988	Panthera_pardus
ENSJJAG00000017385	-	100	86.988	ENSPTIG00000009644	HNRNPF	100	86.988	Panthera_tigris_altaica
ENSJJAG00000017385	-	100	88.193	ENSPTRG00000002446	HNRNPF	100	88.193	Pan_troglodytes
ENSJJAG00000017385	-	100	87.952	ENSPANG00000002212	HNRNPF	100	87.952	Papio_anubis
ENSJJAG00000017385	-	100	88.193	ENSPPYG00000002212	HNRNPF	100	88.193	Pongo_abelii
ENSJJAG00000017385	-	100	84.615	ENSPCAG00000013169	HNRNPF	100	84.615	Procavia_capensis
ENSJJAG00000017385	-	100	86.265	ENSPVAG00000011646	HNRNPF	100	86.265	Pteropus_vampyrus
ENSJJAG00000017385	-	100	89.157	ENSRNOG00000014562	Hnrnpf	100	89.157	Rattus_norvegicus
ENSJJAG00000017385	-	100	88.193	ENSRROG00000001235	HNRNPF	100	88.193	Rhinopithecus_roxellana
ENSJJAG00000017385	-	100	88.675	ENSSBOG00000018361	HNRNPF	100	88.675	Saimiri_boliviensis_boliviensis
ENSJJAG00000017385	-	100	87.229	ENSSARG00000010059	HNRNPF	100	87.229	Sorex_araneus
ENSJJAG00000017385	-	81	71.707	ENSSSCG00000024956	-	96	71.707	Sus_scrofa
ENSJJAG00000017385	-	100	86.265	ENSSSCG00000010203	-	100	86.265	Sus_scrofa
ENSJJAG00000017385	-	98	64.691	ENSTBEG00000016094	HNRNPF	100	64.691	Tupaia_belangeri
ENSJJAG00000017385	-	100	86.988	ENSUAMG00000000455	HNRNPF	100	86.988	Ursus_americanus
ENSJJAG00000017385	-	100	86.988	ENSUMAG00000016485	HNRNPF	100	86.988	Ursus_maritimus
ENSJJAG00000017385	-	100	86.988	ENSVVUG00000021261	HNRNPF	100	86.988	Vulpes_vulpes