EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000017442 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 503 bases
Position: chrJH725560.1:2135614-2136116
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000015216	zf-U11-48K	PF05253.12	6.9e-20	1	2
ENSJJAP00000015216	zf-U11-48K	PF05253.12	6.9e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000021720	-	480	-	ENSJJAP00000015216	159 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000017442's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000017442's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000017442	-	100	93.413	ENSJJAG00000003323	-	100	93.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000017442	-	100	83.234	ENSG00000170627	GTSF1	100	83.234	Homo_sapiens
ENSJJAG00000017442	-	90	44.444	ENSAPOG00000022724	-	92	44.444	Acanthochromis_polyacanthus
ENSJJAG00000017442	-	97	91.558	ENSAMEG00000000939	GTSF1	92	91.558	Ailuropoda_melanoleuca
ENSJJAG00000017442	-	90	42.361	ENSAOCG00000022214	-	66	42.361	Amphiprion_ocellaris
ENSJJAG00000017442	-	77	58.871	ENSAPLG00000004814	GTSF1	90	58.871	Anas_platyrhynchos
ENSJJAG00000017442	-	94	62.000	ENSACAG00000014260	-	87	62.000	Anolis_carolinensis
ENSJJAG00000017442	-	76	47.934	ENSACAG00000029590	-	98	47.934	Anolis_carolinensis
ENSJJAG00000017442	-	100	81.437	ENSANAG00000024529	GTSF1	100	81.437	Aotus_nancymaae
ENSJJAG00000017442	-	97	89.610	ENSBTAG00000018085	GTSF1	100	85.030	Bos_taurus
ENSJJAG00000017442	-	100	75.449	ENSCJAG00000039915	-	88	75.449	Callithrix_jacchus
ENSJJAG00000017442	-	97	85.065	ENSCJAG00000018968	-	100	80.838	Callithrix_jacchus
ENSJJAG00000017442	-	100	86.228	ENSCAFG00000006465	-	100	86.228	Canis_familiaris
ENSJJAG00000017442	-	100	86.228	ENSCAFG00020020373	-	94	85.976	Canis_lupus_dingo
ENSJJAG00000017442	-	97	89.610	ENSCHIG00000012215	-	90	89.610	Capra_hircus
ENSJJAG00000017442	-	99	83.735	ENSTSYG00000004679	-	100	83.735	Carlito_syrichta
ENSJJAG00000017442	-	100	67.925	ENSTSYG00000035266	-	95	67.925	Carlito_syrichta
ENSJJAG00000017442	-	97	90.260	ENSCPOG00000008743	GTSF1	100	86.228	Cavia_porcellus
ENSJJAG00000017442	-	100	60.377	ENSCCAG00000032808	GTSF1	99	60.377	Cebus_capucinus
ENSJJAG00000017442	-	100	83.234	ENSCATG00000036328	GTSF1	100	83.234	Cercocebus_atys
ENSJJAG00000017442	-	100	86.228	ENSCLAG00000012811	GTSF1	100	86.228	Chinchilla_lanigera
ENSJJAG00000017442	-	94	88.667	ENSCSAG00000005394	GTSF1	95	88.667	Chlorocebus_sabaeus
ENSJJAG00000017442	-	97	89.610	ENSCHOG00000001659	GTSF1	93	89.610	Choloepus_hoffmanni
ENSJJAG00000017442	-	99	62.651	ENSCPBG00000005134	-	72	62.651	Chrysemys_picta_bellii
ENSJJAG00000017442	-	100	55.625	ENSCPBG00000024905	-	86	56.051	Chrysemys_picta_bellii
ENSJJAG00000017442	-	100	77.844	ENSCANG00000031776	-	100	77.844	Colobus_angolensis_palliatus
ENSJJAG00000017442	-	100	82.036	ENSCANG00000033118	GTSF1	100	82.036	Colobus_angolensis_palliatus
ENSJJAG00000017442	-	100	87.425	ENSCGRG00001013814	Gtsf1	100	87.425	Cricetulus_griseus_chok1gshd
ENSJJAG00000017442	-	100	87.425	ENSCGRG00000007733	Gtsf1	100	87.425	Cricetulus_griseus_crigri
ENSJJAG00000017442	-	97	89.933	ENSDNOG00000001438	-	88	89.933	Dasypus_novemcinctus
ENSJJAG00000017442	-	100	87.425	ENSDORG00000003228	Gtsf1	100	87.425	Dipodomys_ordii
ENSJJAG00000017442	-	100	84.431	ENSETEG00000009310	GTSF1	100	84.431	Echinops_telfairi
ENSJJAG00000017442	-	100	86.228	ENSEASG00005010260	GTSF1	90	86.228	Equus_asinus_asinus
ENSJJAG00000017442	-	100	86.228	ENSECAG00000013618	GTSF1	100	86.228	Equus_caballus
ENSJJAG00000017442	-	100	86.228	ENSEEUG00000005185	GTSF1	100	86.228	Erinaceus_europaeus
ENSJJAG00000017442	-	100	86.228	ENSFCAG00000010156	-	100	86.228	Felis_catus
ENSJJAG00000017442	-	100	59.281	ENSFCAG00000023672	-	90	59.394	Felis_catus
ENSJJAG00000017442	-	74	52.941	ENSFALG00000007613	-	94	52.941	Ficedula_albicollis
ENSJJAG00000017442	-	100	82.635	ENSFDAG00000009383	GTSF1	100	82.635	Fukomys_damarensis
ENSJJAG00000017442	-	94	54.000	ENSGALG00000001109	GTSF1	92	54.000	Gallus_gallus
ENSJJAG00000017442	-	90	46.154	ENSGACG00000010783	-	77	46.154	Gasterosteus_aculeatus
ENSJJAG00000017442	-	65	49.057	ENSGAGG00000016342	-	99	49.057	Gopherus_agassizii
ENSJJAG00000017442	-	96	58.442	ENSGAGG00000011062	GTSF1	80	58.442	Gopherus_agassizii
ENSJJAG00000017442	-	100	83.234	ENSGGOG00000016063	GTSF1	100	83.234	Gorilla_gorilla
ENSJJAG00000017442	-	100	83.832	ENSHGLG00000002436	GTSF1	100	83.832	Heterocephalus_glaber_female
ENSJJAG00000017442	-	100	83.832	ENSHGLG00100017301	GTSF1	100	83.832	Heterocephalus_glaber_male
ENSJJAG00000017442	-	93	44.667	ENSIPUG00000002483	-	78	44.898	Ictalurus_punctatus
ENSJJAG00000017442	-	100	88.024	ENSSTOG00000025170	GTSF1	100	88.024	Ictidomys_tridecemlineatus
ENSJJAG00000017442	-	90	45.455	ENSKMAG00000006038	-	77	45.455	Kryptolebias_marmoratus
ENSJJAG00000017442	-	96	56.579	ENSLACG00000008870	GTSF1	79	56.579	Latimeria_chalumnae
ENSJJAG00000017442	-	97	91.558	ENSLAFG00000016318	GTSF1	92	91.558	Loxodonta_africana
ENSJJAG00000017442	-	100	83.234	ENSMFAG00000041178	GTSF1	100	83.234	Macaca_fascicularis
ENSJJAG00000017442	-	100	83.234	ENSMMUG00000003758	GTSF1	100	83.234	Macaca_mulatta
ENSJJAG00000017442	-	100	83.234	ENSMNEG00000036779	GTSF1	100	83.234	Macaca_nemestrina
ENSJJAG00000017442	-	100	82.635	ENSMLEG00000028375	GTSF1	100	82.635	Mandrillus_leucophaeus
ENSJJAG00000017442	-	77	56.911	ENSMGAG00000000685	GTSF1	87	56.911	Meleagris_gallopavo
ENSJJAG00000017442	-	97	68.182	ENSMAUG00000018746	Gtsf1	90	68.182	Mesocricetus_auratus
ENSJJAG00000017442	-	100	86.228	ENSMICG00000008444	-	100	86.228	Microcebus_murinus
ENSJJAG00000017442	-	100	86.826	ENSMOCG00000018889	Gtsf1	100	86.826	Microtus_ochrogaster
ENSJJAG00000017442	-	100	78.443	ENSMODG00000019422	GTSF1	100	78.443	Monodelphis_domestica
ENSJJAG00000017442	-	100	86.826	MGP_CAROLIEiJ_G0020379	Gtsf1	100	87.578	Mus_caroli
ENSJJAG00000017442	-	100	86.826	ENSMUSG00000022487	Gtsf1	100	87.578	Mus_musculus
ENSJJAG00000017442	-	100	86.228	MGP_PahariEiJ_G0020378	Gtsf1	100	86.957	Mus_pahari
ENSJJAG00000017442	-	100	86.826	MGP_SPRETEiJ_G0021272	Gtsf1	100	87.578	Mus_spretus
ENSJJAG00000017442	-	100	79.874	ENSMPUG00000019140	-	95	79.874	Mustela_putorius_furo
ENSJJAG00000017442	-	100	85.629	ENSMPUG00000019323	-	100	85.629	Mustela_putorius_furo
ENSJJAG00000017442	-	97	91.558	ENSMPUG00000005669	-	92	91.558	Mustela_putorius_furo
ENSJJAG00000017442	-	100	81.437	ENSMLUG00000026557	-	100	81.437	Myotis_lucifugus
ENSJJAG00000017442	-	100	84.431	ENSMLUG00000012961	-	100	84.431	Myotis_lucifugus
ENSJJAG00000017442	-	100	87.425	ENSNGAG00000014213	Gtsf1	100	87.425	Nannospalax_galili
ENSJJAG00000017442	-	100	82.635	ENSNLEG00000017635	GTSF1	100	82.635	Nomascus_leucogenys
ENSJJAG00000017442	-	92	80.137	ENSMEUG00000016206	GTSF1	87	80.137	Notamacropus_eugenii
ENSJJAG00000017442	-	100	59.281	ENSOPRG00000017277	GTSF1	100	59.281	Ochotona_princeps
ENSJJAG00000017442	-	100	87.425	ENSODEG00000014220	GTSF1	100	87.425	Octodon_degus
ENSJJAG00000017442	-	100	65.000	ENSOANG00000011386	GTSF1	96	65.000	Ornithorhynchus_anatinus
ENSJJAG00000017442	-	100	86.826	ENSOCUG00000024495	GTSF1	100	86.826	Oryctolagus_cuniculus
ENSJJAG00000017442	-	69	47.706	ENSORLG00015005017	-	68	47.706	Oryzias_latipes_hsok
ENSJJAG00000017442	-	99	87.261	ENSOGAG00000017227	GTSF1	92	87.261	Otolemur_garnettii
ENSJJAG00000017442	-	100	85.629	ENSOARG00000016162	GTSF1	100	85.629	Ovis_aries
ENSJJAG00000017442	-	100	83.234	ENSPPAG00000028506	GTSF1	100	83.234	Pan_paniscus
ENSJJAG00000017442	-	100	86.228	ENSPPRG00000004344	-	100	86.228	Panthera_pardus
ENSJJAG00000017442	-	100	77.844	ENSPPRG00000017612	-	91	77.844	Panthera_pardus
ENSJJAG00000017442	-	100	78.443	ENSPTIG00000010868	-	91	78.443	Panthera_tigris_altaica
ENSJJAG00000017442	-	100	86.228	ENSPTIG00000020415	-	100	86.228	Panthera_tigris_altaica
ENSJJAG00000017442	-	100	83.234	ENSPTRG00000005041	GTSF1	100	83.234	Pan_troglodytes
ENSJJAG00000017442	-	100	83.234	ENSPANG00000020579	GTSF1	100	83.234	Papio_anubis
ENSJJAG00000017442	-	75	48.361	ENSPSIG00000009839	-	76	48.361	Pelodiscus_sinensis
ENSJJAG00000017442	-	95	66.447	ENSPSIG00000009968	GTSF1	74	66.447	Pelodiscus_sinensis
ENSJJAG00000017442	-	100	87.425	ENSPEMG00000009595	Gtsf1	100	87.425	Peromyscus_maniculatus_bairdii
ENSJJAG00000017442	-	100	74.251	ENSPCIG00000006731	GTSF1	100	74.251	Phascolarctos_cinereus
ENSJJAG00000017442	-	100	83.234	ENSPPYG00000004605	GTSF1	100	83.234	Pongo_abelii
ENSJJAG00000017442	-	100	77.987	ENSPCOG00000015201	-	94	80.519	Propithecus_coquereli
ENSJJAG00000017442	-	100	85.629	ENSPCOG00000016907	-	100	85.629	Propithecus_coquereli
ENSJJAG00000017442	-	100	86.228	ENSPVAG00000000333	GTSF1	100	86.228	Pteropus_vampyrus
ENSJJAG00000017442	-	90	46.207	ENSPNAG00000005737	-	78	46.207	Pygocentrus_nattereri
ENSJJAG00000017442	-	100	86.826	ENSRNOG00000036831	Gtsf1	88	86.826	Rattus_norvegicus
ENSJJAG00000017442	-	100	76.048	ENSRBIG00000039916	-	89	76.048	Rhinopithecus_bieti
ENSJJAG00000017442	-	97	87.013	ENSRBIG00000043438	-	100	82.635	Rhinopithecus_bieti
ENSJJAG00000017442	-	100	83.234	ENSRROG00000008137	GTSF1	100	83.234	Rhinopithecus_roxellana
ENSJJAG00000017442	-	100	81.437	ENSSBOG00000029460	GTSF1	100	81.437	Saimiri_boliviensis_boliviensis
ENSJJAG00000017442	-	97	82.468	ENSSHAG00000011633	GTSF1	100	78.443	Sarcophilus_harrisii
ENSJJAG00000017442	-	77	86.154	ENSSARG00000004928	GTSF1	78	86.154	Sorex_araneus
ENSJJAG00000017442	-	97	48.408	ENSSPUG00000010064	GTSF1	86	65.686	Sphenodon_punctatus
ENSJJAG00000017442	-	100	85.629	ENSSSCG00000026333	GTSF1	100	85.629	Sus_scrofa
ENSJJAG00000017442	-	74	55.462	ENSTGUG00000002008	-	93	55.462	Taeniopygia_guttata
ENSJJAG00000017442	-	100	85.535	ENSTBEG00000006154	GTSF1	99	85.535	Tupaia_belangeri
ENSJJAG00000017442	-	100	85.629	ENSTTRG00000004470	GTSF1	100	85.629	Tursiops_truncatus
ENSJJAG00000017442	-	100	86.826	ENSUAMG00000021669	GTSF1	94	86.585	Ursus_americanus
ENSJJAG00000017442	-	100	86.826	ENSUMAG00000011279	GTSF1	100	86.826	Ursus_maritimus
ENSJJAG00000017442	-	97	91.558	ENSVPAG00000007016	GTSF1	93	91.558	Vicugna_pacos
ENSJJAG00000017442	-	100	86.228	ENSVVUG00000023687	-	84	86.228	Vulpes_vulpes
ENSJJAG00000017442	-	93	62.162	ENSXETG00000033546	gtsf1	65	62.162	Xenopus_tropicalis