EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000017611 (Gene tree)
Gene ID: 101615986
Gene Symbol: Shq1
Alias: 2810403P18Rik|Grim-1
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 140926 bases
Position: chrJH725441.1:15179608-15320533
Accession: 101615986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000015458	SHQ1	PF04925.15	9.5e-70	1	1
ENSJJAP00000015461	SHQ1	PF04925.15	1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000021966	-	1377	-	ENSJJAP00000015461	458 (aa)	-	-
ENSJJAT00000021963	-	1710	XM_004651508	ENSJJAP00000015458	569 (aa)	XP_004651565	-

Gene Model

Click here to download ENSJJAG00000017611's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000017611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000017611	Shq1	100	84.016	ENSG00000144736	SHQ1	100	84.000	Homo_sapiens
ENSJJAG00000017611	Shq1	71	68.750	ENSAPOG00000000397	shq1	70	61.785	Acanthochromis_polyacanthus
ENSJJAG00000017611	Shq1	99	85.246	ENSAMEG00000015140	SHQ1	100	76.083	Ailuropoda_melanoleuca
ENSJJAG00000017611	Shq1	76	60.920	ENSACIG00000021249	shq1	71	60.920	Amphilophus_citrinellus
ENSJJAG00000017611	Shq1	71	68.750	ENSAOCG00000023311	shq1	70	63.387	Amphiprion_ocellaris
ENSJJAG00000017611	Shq1	71	68.750	ENSAPEG00000021686	shq1	70	62.700	Amphiprion_percula
ENSJJAG00000017611	Shq1	78	61.830	ENSATEG00000008475	shq1	67	62.260	Anabas_testudineus
ENSJJAG00000017611	Shq1	79	66.962	ENSAPLG00000013926	SHQ1	100	63.261	Anas_platyrhynchos
ENSJJAG00000017611	Shq1	95	66.122	ENSACAG00000014809	SHQ1	82	60.721	Anolis_carolinensis
ENSJJAG00000017611	Shq1	99	57.941	ENSANAG00000030500	-	99	56.643	Aotus_nancymaae
ENSJJAG00000017611	Shq1	100	81.148	ENSANAG00000029241	SHQ1	100	74.697	Aotus_nancymaae
ENSJJAG00000017611	Shq1	76	60.183	ENSACLG00000023077	shq1	69	56.629	Astatotilapia_calliptera
ENSJJAG00000017611	Shq1	76	55.093	ENSAMXG00000043822	shq1	71	56.010	Astyanax_mexicanus
ENSJJAG00000017611	Shq1	100	82.377	ENSBTAG00000005436	SHQ1	100	75.130	Bos_taurus
ENSJJAG00000017611	Shq1	76	32.731	WBGene00021655	Y48A5A.1	92	33.097	Caenorhabditis_elegans
ENSJJAG00000017611	Shq1	100	80.738	ENSCJAG00000015131	SHQ1	100	73.921	Callithrix_jacchus
ENSJJAG00000017611	Shq1	99	86.066	ENSCAFG00000006434	SHQ1	99	75.910	Canis_familiaris
ENSJJAG00000017611	Shq1	100	86.066	ENSCAFG00020016743	SHQ1	99	75.737	Canis_lupus_dingo
ENSJJAG00000017611	Shq1	100	81.967	ENSCHIG00000012271	SHQ1	91	73.748	Capra_hircus
ENSJJAG00000017611	Shq1	98	83.197	ENSTSYG00000014439	SHQ1	99	71.681	Carlito_syrichta
ENSJJAG00000017611	Shq1	91	65.377	ENSCAPG00000009343	SHQ1	97	88.312	Cavia_aperea
ENSJJAG00000017611	Shq1	99	84.426	ENSCPOG00000011443	SHQ1	99	74.099	Cavia_porcellus
ENSJJAG00000017611	Shq1	100	65.338	ENSCCAG00000027080	SHQ1	100	65.858	Cebus_capucinus
ENSJJAG00000017611	Shq1	96	60.250	ENSCCAG00000036087	-	97	59.002	Cebus_capucinus
ENSJJAG00000017611	Shq1	100	83.197	ENSCATG00000041238	SHQ1	100	75.302	Cercocebus_atys
ENSJJAG00000017611	Shq1	98	84.426	ENSCLAG00000004206	SHQ1	99	74.784	Chinchilla_lanigera
ENSJJAG00000017611	Shq1	81	79.355	ENSCSAG00000011514	SHQ1	100	72.449	Chlorocebus_sabaeus
ENSJJAG00000017611	Shq1	51	91.667	ENSCHOG00000003273	-	84	91.667	Choloepus_hoffmanni
ENSJJAG00000017611	Shq1	94	69.328	ENSCPBG00000006441	SHQ1	90	62.816	Chrysemys_picta_bellii
ENSJJAG00000017611	Shq1	62	59.091	ENSCING00000008013	-	68	59.091	Ciona_intestinalis
ENSJJAG00000017611	Shq1	62	62.791	ENSCSAVG00000002332	-	70	62.791	Ciona_savignyi
ENSJJAG00000017611	Shq1	98	83.197	ENSCANG00000039295	SHQ1	99	75.524	Colobus_angolensis_palliatus
ENSJJAG00000017611	Shq1	100	85.656	ENSCGRG00001012583	Shq1	100	85.656	Cricetulus_griseus_chok1gshd
ENSJJAG00000017611	Shq1	100	85.656	ENSCGRG00000009849	Shq1	100	85.656	Cricetulus_griseus_crigri
ENSJJAG00000017611	Shq1	73	62.291	ENSCSEG00000007829	shq1	66	62.500	Cynoglossus_semilaevis
ENSJJAG00000017611	Shq1	76	62.014	ENSCVAG00000020049	shq1	93	52.135	Cyprinodon_variegatus
ENSJJAG00000017611	Shq1	76	59.268	ENSDARG00000058522	shq1	69	59.277	Danio_rerio
ENSJJAG00000017611	Shq1	100	84.016	ENSDNOG00000033937	SHQ1	100	74.523	Dasypus_novemcinctus
ENSJJAG00000017611	Shq1	91	84.158	ENSETEG00000005766	SHQ1	99	63.874	Echinops_telfairi
ENSJJAG00000017611	Shq1	66	47.872	ENSEBUG00000005445	shq1	73	49.085	Eptatretus_burgeri
ENSJJAG00000017611	Shq1	100	84.836	ENSEASG00005002237	SHQ1	100	76.603	Equus_asinus_asinus
ENSJJAG00000017611	Shq1	98	85.246	ENSECAG00000015673	SHQ1	95	76.855	Equus_caballus
ENSJJAG00000017611	Shq1	99	79.508	ENSEEUG00000010568	SHQ1	99	72.522	Erinaceus_europaeus
ENSJJAG00000017611	Shq1	55	81.818	ENSELUG00000003476	shq1	81	58.824	Esox_lucius
ENSJJAG00000017611	Shq1	100	85.246	ENSFCAG00000012781	SHQ1	100	76.399	Felis_catus
ENSJJAG00000017611	Shq1	95	69.388	ENSFALG00000013428	SHQ1	90	60.721	Ficedula_albicollis
ENSJJAG00000017611	Shq1	98	82.787	ENSFDAG00000005595	SHQ1	91	70.134	Fukomys_damarensis
ENSJJAG00000017611	Shq1	81	57.849	ENSFHEG00000017552	shq1	94	51.115	Fundulus_heteroclitus
ENSJJAG00000017611	Shq1	57	73.171	ENSGMOG00000007350	shq1	100	58.438	Gadus_morhua
ENSJJAG00000017611	Shq1	94	70.539	ENSGALG00000007798	SHQ1	90	60.579	Gallus_gallus
ENSJJAG00000017611	Shq1	57	75.610	ENSGACG00000011797	shq1	100	60.804	Gasterosteus_aculeatus
ENSJJAG00000017611	Shq1	100	83.197	ENSGGOG00000034818	SHQ1	100	75.130	Gorilla_gorilla
ENSJJAG00000017611	Shq1	76	59.954	ENSHBUG00000010857	shq1	68	60.337	Haplochromis_burtoni
ENSJJAG00000017611	Shq1	100	84.426	ENSHGLG00000003637	SHQ1	92	72.833	Heterocephalus_glaber_female
ENSJJAG00000017611	Shq1	100	84.426	ENSHGLG00100011957	SHQ1	92	73.077	Heterocephalus_glaber_male
ENSJJAG00000017611	Shq1	88	58.371	ENSHCOG00000010799	shq1	90	51.024	Hippocampus_comes
ENSJJAG00000017611	Shq1	78	56.920	ENSIPUG00000001247	shq1	70	57.794	Ictalurus_punctatus
ENSJJAG00000017611	Shq1	98	79.918	ENSSTOG00000010043	SHQ1	100	71.658	Ictidomys_tridecemlineatus
ENSJJAG00000017611	Shq1	76	61.416	ENSKMAG00000004457	shq1	73	61.416	Kryptolebias_marmoratus
ENSJJAG00000017611	Shq1	78	67.494	ENSLACG00000014243	SHQ1	85	58.007	Latimeria_chalumnae
ENSJJAG00000017611	Shq1	76	64.679	ENSLOCG00000009970	shq1	95	55.495	Lepisosteus_oculatus
ENSJJAG00000017611	Shq1	100	83.607	ENSMFAG00000039148	SHQ1	100	75.302	Macaca_fascicularis
ENSJJAG00000017611	Shq1	99	56.000	ENSMFAG00000037396	-	99	54.435	Macaca_fascicularis
ENSJJAG00000017611	Shq1	90	82.143	ENSMMUG00000009571	SHQ1	96	74.011	Macaca_mulatta
ENSJJAG00000017611	Shq1	99	55.478	ENSMMUG00000021761	-	99	53.913	Macaca_mulatta
ENSJJAG00000017611	Shq1	100	83.607	ENSMNEG00000032667	SHQ1	100	75.302	Macaca_nemestrina
ENSJJAG00000017611	Shq1	100	83.197	ENSMLEG00000038493	SHQ1	100	75.648	Mandrillus_leucophaeus
ENSJJAG00000017611	Shq1	80	60.175	ENSMAMG00000023432	shq1	67	61.905	Mastacembelus_armatus
ENSJJAG00000017611	Shq1	76	60.183	ENSMZEG00005008649	shq1	68	60.577	Maylandia_zebra
ENSJJAG00000017611	Shq1	94	69.167	ENSMGAG00000009640	SHQ1	90	59.239	Meleagris_gallopavo
ENSJJAG00000017611	Shq1	100	86.066	ENSMAUG00000022030	Shq1	100	86.066	Mesocricetus_auratus
ENSJJAG00000017611	Shq1	100	82.857	ENSMICG00000009224	SHQ1	100	75.214	Microcebus_murinus
ENSJJAG00000017611	Shq1	99	86.885	ENSMOCG00000017836	Shq1	98	86.885	Microtus_ochrogaster
ENSJJAG00000017611	Shq1	76	60.690	ENSMMOG00000010569	shq1	69	60.628	Mola_mola
ENSJJAG00000017611	Shq1	94	68.852	ENSMODG00000003926	SHQ1	98	63.091	Monodelphis_domestica
ENSJJAG00000017611	Shq1	77	62.812	ENSMALG00000008870	shq1	72	62.812	Monopterus_albus
ENSJJAG00000017611	Shq1	98	85.246	MGP_CAROLIEiJ_G0028689	Shq1	98	85.246	Mus_caroli
ENSJJAG00000017611	Shq1	98	85.246	ENSMUSG00000035378	Shq1	98	85.246	Mus_musculus
ENSJJAG00000017611	Shq1	98	87.295	MGP_PahariEiJ_G0022440	Shq1	98	87.295	Mus_pahari
ENSJJAG00000017611	Shq1	99	85.246	MGP_SPRETEiJ_G0029717	Shq1	99	85.246	Mus_spretus
ENSJJAG00000017611	Shq1	99	84.016	ENSMPUG00000017006	SHQ1	98	75.737	Mustela_putorius_furo
ENSJJAG00000017611	Shq1	88	70.539	ENSMLUG00000013539	SHQ1	98	68.511	Myotis_lucifugus
ENSJJAG00000017611	Shq1	98	85.892	ENSNGAG00000023317	Shq1	100	73.179	Nannospalax_galili
ENSJJAG00000017611	Shq1	61	59.195	ENSNBRG00000024004	shq1	62	59.633	Neolamprologus_brichardi
ENSJJAG00000017611	Shq1	100	84.836	ENSNLEG00000002731	SHQ1	100	76.339	Nomascus_leucogenys
ENSJJAG00000017611	Shq1	83	63.889	ENSMEUG00000009350	-	89	63.889	Notamacropus_eugenii
ENSJJAG00000017611	Shq1	99	73.535	ENSODEG00000009192	SHQ1	99	82.377	Octodon_degus
ENSJJAG00000017611	Shq1	76	60.183	ENSONIG00000020264	shq1	68	60.577	Oreochromis_niloticus
ENSJJAG00000017611	Shq1	99	83.128	ENSOCUG00000016695	SHQ1	99	74.055	Oryctolagus_cuniculus
ENSJJAG00000017611	Shq1	76	59.122	ENSORLG00000023538	shq1	78	59.039	Oryzias_latipes
ENSJJAG00000017611	Shq1	76	60.046	ENSORLG00020003697	shq1	77	59.954	Oryzias_latipes_hni
ENSJJAG00000017611	Shq1	76	60.046	ENSORLG00015021040	shq1	78	59.954	Oryzias_latipes_hsok
ENSJJAG00000017611	Shq1	76	60.648	ENSOMEG00000001225	shq1	74	60.482	Oryzias_melastigma
ENSJJAG00000017611	Shq1	98	84.211	ENSOGAG00000003898	SHQ1	100	75.742	Otolemur_garnettii
ENSJJAG00000017611	Shq1	100	80.894	ENSOARG00000009547	SHQ1	100	72.603	Ovis_aries
ENSJJAG00000017611	Shq1	99	59.910	ENSPPAG00000043263	-	99	57.093	Pan_paniscus
ENSJJAG00000017611	Shq1	100	84.016	ENSPPAG00000027714	SHQ1	100	75.302	Pan_paniscus
ENSJJAG00000017611	Shq1	100	85.246	ENSPPRG00000004769	SHQ1	100	76.256	Panthera_pardus
ENSJJAG00000017611	Shq1	98	78.205	ENSPTIG00000011478	SHQ1	100	71.924	Panthera_tigris_altaica
ENSJJAG00000017611	Shq1	100	84.016	ENSPTRG00000015106	SHQ1	100	75.302	Pan_troglodytes
ENSJJAG00000017611	Shq1	99	59.910	ENSPTRG00000048303	-	99	56.574	Pan_troglodytes
ENSJJAG00000017611	Shq1	100	81.557	ENSPANG00000002881	SHQ1	100	75.648	Papio_anubis
ENSJJAG00000017611	Shq1	69	70.270	ENSPKIG00000021517	shq1	93	50.000	Paramormyrops_kingsleyae
ENSJJAG00000017611	Shq1	97	68.619	ENSPSIG00000005536	SHQ1	93	62.281	Pelodiscus_sinensis
ENSJJAG00000017611	Shq1	68	70.787	ENSPMGG00000008838	shq1	75	57.271	Periophthalmus_magnuspinnatus
ENSJJAG00000017611	Shq1	98	85.656	ENSPEMG00000000251	Shq1	98	85.656	Peromyscus_maniculatus_bairdii
ENSJJAG00000017611	Shq1	77	56.854	ENSPMAG00000005372	shq1	98	56.854	Petromyzon_marinus
ENSJJAG00000017611	Shq1	76	60.592	ENSPFOG00000003118	shq1	75	60.287	Poecilia_formosa
ENSJJAG00000017611	Shq1	61	58.908	ENSPMEG00000011076	shq1	71	58.410	Poecilia_mexicana
ENSJJAG00000017611	Shq1	68	58.549	ENSPREG00000000591	shq1	92	50.298	Poecilia_reticulata
ENSJJAG00000017611	Shq1	100	82.787	ENSPPYG00000013717	SHQ1	100	75.345	Pongo_abelii
ENSJJAG00000017611	Shq1	95	86.475	ENSPCAG00000009035	SHQ1	99	74.737	Procavia_capensis
ENSJJAG00000017611	Shq1	100	82.186	ENSPCOG00000008415	SHQ1	100	74.144	Propithecus_coquereli
ENSJJAG00000017611	Shq1	99	84.016	ENSPVAG00000017392	SHQ1	99	76.708	Pteropus_vampyrus
ENSJJAG00000017611	Shq1	81	57.602	ENSPNYG00000003878	shq1	78	55.833	Pundamilia_nyererei
ENSJJAG00000017611	Shq1	76	58.525	ENSPNAG00000026840	shq1	67	58.993	Pygocentrus_nattereri
ENSJJAG00000017611	Shq1	99	86.475	ENSRNOG00000005433	Shq1	99	75.707	Rattus_norvegicus
ENSJJAG00000017611	Shq1	98	79.918	ENSRBIG00000026280	SHQ1	99	71.902	Rhinopithecus_bieti
ENSJJAG00000017611	Shq1	98	83.197	ENSRROG00000034126	SHQ1	99	75.524	Rhinopithecus_roxellana
ENSJJAG00000017611	Shq1	100	67.358	ENSSBOG00000021038	SHQ1	100	66.839	Saimiri_boliviensis_boliviensis
ENSJJAG00000017611	Shq1	95	74.167	ENSSHAG00000015077	SHQ1	99	63.523	Sarcophilus_harrisii
ENSJJAG00000017611	Shq1	71	73.494	ENSSFOG00015016241	shq1	79	62.273	Scleropages_formosus
ENSJJAG00000017611	Shq1	78	62.528	ENSSMAG00000016151	shq1	72	62.528	Scophthalmus_maximus
ENSJJAG00000017611	Shq1	76	63.741	ENSSDUG00000011986	shq1	72	61.435	Seriola_dumerili
ENSJJAG00000017611	Shq1	78	62.302	ENSSLDG00000013908	shq1	71	62.528	Seriola_lalandi_dorsalis
ENSJJAG00000017611	Shq1	100	66.559	ENSSARG00000007119	SHQ1	100	60.069	Sorex_araneus
ENSJJAG00000017611	Shq1	75	69.737	ENSSPUG00000011526	-	90	58.921	Sphenodon_punctatus
ENSJJAG00000017611	Shq1	99	81.148	ENSSSCG00000011518	SHQ1	99	72.870	Sus_scrofa
ENSJJAG00000017611	Shq1	95	64.469	ENSTGUG00000009933	SHQ1	96	60.503	Taeniopygia_guttata
ENSJJAG00000017611	Shq1	66	64.407	ENSTRUG00000009446	shq1	92	49.286	Takifugu_rubripes
ENSJJAG00000017611	Shq1	73	56.250	ENSTNIG00000007354	shq1	90	56.250	Tetraodon_nigroviridis
ENSJJAG00000017611	Shq1	79	91.489	ENSTBEG00000011295	SHQ1	80	91.489	Tupaia_belangeri
ENSJJAG00000017611	Shq1	100	84.836	ENSTTRG00000005320	SHQ1	100	74.784	Tursiops_truncatus
ENSJJAG00000017611	Shq1	92	86.425	ENSUMAG00000024031	SHQ1	97	75.177	Ursus_maritimus
ENSJJAG00000017611	Shq1	92	63.534	ENSVPAG00000004880	SHQ1	100	64.662	Vicugna_pacos
ENSJJAG00000017611	Shq1	99	86.066	ENSVVUG00000013906	SHQ1	99	75.910	Vulpes_vulpes
ENSJJAG00000017611	Shq1	78	64.932	ENSXETG00000032215	shq1	72	64.932	Xenopus_tropicalis