EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000017633 (Gene tree)
Gene ID: 101607881
Gene Symbol: Chd3
Alias: 2600010P09Rik|Chd7|Mi-2 alpha|Prp7|Prp9-1
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 29925 bases
Position: chrJH725564.1:5275189-5305113
Accession: 101607881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000015542	ResIII	PF04851.15	1.4e-08	1	1
ENSJJAP00000015526	ResIII	PF04851.15	1.4e-08	1	1
ENSJJAP00000015536	ResIII	PF04851.15	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000022047	-	5802	-	ENSJJAP00000015542	1933 (aa)	-	-
ENSJJAT00000022031	-	7090	XM_004669208	ENSJJAP00000015526	1967 (aa)	XP_004669265	-
ENSJJAT00000022041	-	5991	-	ENSJJAP00000015536	1996 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000017633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000017633's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000017633	Chd3	93	70.949	ENSJJAG00000019072	Chd5	97	69.730
ENSJJAG00000017633	Chd3	91	71.206	ENSJJAG00000012394	Chd4	97	70.100

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000017633	Chd3	100	97.827	ENSG00000170004	CHD3	100	96.802	Homo_sapiens
ENSJJAG00000017633	Chd3	86	76.449	ENSAPOG00000005614	chd3	94	80.729	Acanthochromis_polyacanthus
ENSJJAG00000017633	Chd3	69	96.114	ENSAMEG00000003025	-	100	96.114	Ailuropoda_melanoleuca
ENSJJAG00000017633	Chd3	81	85.955	ENSACIG00000019671	chd3	98	85.955	Amphilophus_citrinellus
ENSJJAG00000017633	Chd3	92	81.100	ENSAOCG00000023784	chd3	97	81.675	Amphiprion_ocellaris
ENSJJAG00000017633	Chd3	92	80.756	ENSAPEG00000006341	chd3	96	76.522	Amphiprion_percula
ENSJJAG00000017633	Chd3	92	81.315	ENSATEG00000000848	chd3	95	82.105	Anabas_testudineus
ENSJJAG00000017633	Chd3	98	84.746	ENSACAG00000004276	CHD3	95	84.530	Anolis_carolinensis
ENSJJAG00000017633	Chd3	100	94.775	ENSANAG00000034323	CHD3	99	97.445	Aotus_nancymaae
ENSJJAG00000017633	Chd3	92	79.495	ENSACLG00000009222	chd3	99	74.817	Astatotilapia_calliptera
ENSJJAG00000017633	Chd3	100	97.002	ENSBTAG00000014377	CHD3	97	97.135	Bos_taurus
ENSJJAG00000017633	Chd3	100	97.724	ENSCJAG00000014766	CHD3	99	96.747	Callithrix_jacchus
ENSJJAG00000017633	Chd3	100	97.306	ENSCAFG00000016859	CHD3	99	96.493	Canis_familiaris
ENSJJAG00000017633	Chd3	95	97.341	ENSCAFG00020007422	CHD3	100	97.272	Canis_lupus_dingo
ENSJJAG00000017633	Chd3	100	97.204	ENSCHIG00000016737	CHD3	100	96.867	Capra_hircus
ENSJJAG00000017633	Chd3	100	97.517	ENSTSYG00000035658	CHD3	100	96.502	Carlito_syrichta
ENSJJAG00000017633	Chd3	100	94.357	ENSCAPG00000014864	CHD3	99	93.581	Cavia_aperea
ENSJJAG00000017633	Chd3	100	96.899	ENSCPOG00000022653	CHD3	99	96.088	Cavia_porcellus
ENSJJAG00000017633	Chd3	100	97.569	ENSCCAG00000034792	CHD3	99	96.697	Cebus_capucinus
ENSJJAG00000017633	Chd3	100	97.672	ENSCATG00000041717	CHD3	100	96.602	Cercocebus_atys
ENSJJAG00000017633	Chd3	100	97.465	ENSCLAG00000010523	CHD3	100	97.465	Chinchilla_lanigera
ENSJJAG00000017633	Chd3	100	97.204	ENSCSAG00000011122	CHD3	99	97.205	Chlorocebus_sabaeus
ENSJJAG00000017633	Chd3	90	83.798	ENSCPBG00000011966	CHD3	99	87.089	Chrysemys_picta_bellii
ENSJJAG00000017633	Chd3	100	97.569	ENSCANG00000037641	CHD3	100	96.452	Colobus_angolensis_palliatus
ENSJJAG00000017633	Chd3	100	96.743	ENSCGRG00001011306	Chd3	100	96.743	Cricetulus_griseus_chok1gshd
ENSJJAG00000017633	Chd3	94	96.324	ENSCGRG00000007878	Chd3	99	96.324	Cricetulus_griseus_crigri
ENSJJAG00000017633	Chd3	92	79.605	ENSCSEG00000004489	chd3	98	79.605	Cynoglossus_semilaevis
ENSJJAG00000017633	Chd3	89	83.065	ENSCVAG00000007293	chd3	95	82.470	Cyprinodon_variegatus
ENSJJAG00000017633	Chd3	95	77.103	ENSDARG00000021405	chd3	99	76.546	Danio_rerio
ENSJJAG00000017633	Chd3	100	82.439	ENSDNOG00000047846	CHD3	99	82.374	Dasypus_novemcinctus
ENSJJAG00000017633	Chd3	100	97.103	ENSDORG00000010713	Chd3	100	97.103	Dipodomys_ordii
ENSJJAG00000017633	Chd3	98	90.763	ENSETEG00000017733	CHD3	100	90.763	Echinops_telfairi
ENSJJAG00000017633	Chd3	76	69.904	ENSEBUG00000008310	chd3	99	70.823	Eptatretus_burgeri
ENSJJAG00000017633	Chd3	93	97.163	ENSEASG00005019360	CHD3	100	97.163	Equus_asinus_asinus
ENSJJAG00000017633	Chd3	93	97.218	ENSECAG00000010051	CHD3	100	97.218	Equus_caballus
ENSJJAG00000017633	Chd3	93	93.220	ENSEEUG00000015205	CHD3	92	94.231	Erinaceus_europaeus
ENSJJAG00000017633	Chd3	79	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSJJAG00000017633	Chd3	100	96.950	ENSFCAG00000009629	CHD3	96	96.951	Felis_catus
ENSJJAG00000017633	Chd3	100	95.018	ENSFDAG00000008220	CHD3	99	95.018	Fukomys_damarensis
ENSJJAG00000017633	Chd3	90	80.508	ENSGMOG00000013599	chd3	91	81.117	Gadus_morhua
ENSJJAG00000017633	Chd3	60	74.659	ENSGAFG00000004055	chd3	99	76.496	Gambusia_affinis
ENSJJAG00000017633	Chd3	99	70.627	ENSGACG00000019275	chd3	100	70.934	Gasterosteus_aculeatus
ENSJJAG00000017633	Chd3	76	86.490	ENSGAGG00000013164	CHD3	98	86.626	Gopherus_agassizii
ENSJJAG00000017633	Chd3	100	97.724	ENSGGOG00000013496	CHD3	100	96.652	Gorilla_gorilla
ENSJJAG00000017633	Chd3	100	97.362	ENSHGLG00000012017	CHD3	99	97.204	Heterocephalus_glaber_female
ENSJJAG00000017633	Chd3	89	89.787	ENSHGLG00100013902	CHD3	99	89.787	Heterocephalus_glaber_male
ENSJJAG00000017633	Chd3	95	72.563	ENSHCOG00000010170	chd3	96	73.255	Hippocampus_comes
ENSJJAG00000017633	Chd3	91	74.099	ENSIPUG00000003271	chd3	96	79.501	Ictalurus_punctatus
ENSJJAG00000017633	Chd3	100	97.362	ENSSTOG00000025907	CHD3	100	97.362	Ictidomys_tridecemlineatus
ENSJJAG00000017633	Chd3	86	90.047	ENSKMAG00000019292	chd3	97	75.795	Kryptolebias_marmoratus
ENSJJAG00000017633	Chd3	96	73.298	ENSLBEG00000028485	chd3	92	78.598	Labrus_bergylta
ENSJJAG00000017633	Chd3	97	74.949	ENSLACG00000008031	CHD3	98	75.369	Latimeria_chalumnae
ENSJJAG00000017633	Chd3	98	77.355	ENSLOCG00000013965	chd3	97	77.448	Lepisosteus_oculatus
ENSJJAG00000017633	Chd3	96	93.213	ENSLAFG00000000572	CHD3	100	93.217	Loxodonta_africana
ENSJJAG00000017633	Chd3	100	97.724	ENSMFAG00000020113	CHD3	100	96.652	Macaca_fascicularis
ENSJJAG00000017633	Chd3	100	95.170	ENSMMUG00000022221	CHD3	100	94.303	Macaca_mulatta
ENSJJAG00000017633	Chd3	100	97.620	ENSMNEG00000001728	CHD3	100	96.552	Macaca_nemestrina
ENSJJAG00000017633	Chd3	100	97.672	ENSMLEG00000032249	CHD3	100	96.602	Mandrillus_leucophaeus
ENSJJAG00000017633	Chd3	86	76.526	ENSMAMG00000000564	chd3	99	77.297	Mastacembelus_armatus
ENSJJAG00000017633	Chd3	100	96.536	ENSMAUG00000013873	Chd3	99	93.870	Mesocricetus_auratus
ENSJJAG00000017633	Chd3	100	97.306	ENSMICG00000008741	CHD3	100	93.756	Microcebus_murinus
ENSJJAG00000017633	Chd3	99	96.993	ENSMOCG00000004848	Chd3	100	96.993	Microtus_ochrogaster
ENSJJAG00000017633	Chd3	96	74.652	ENSMMOG00000012699	chd3	99	74.401	Mola_mola
ENSJJAG00000017633	Chd3	93	93.556	ENSMODG00000007509	CHD3	100	93.611	Monodelphis_domestica
ENSJJAG00000017633	Chd3	100	96.436	MGP_CAROLIEiJ_G0016564	Chd3	100	96.554	Mus_caroli
ENSJJAG00000017633	Chd3	100	96.539	ENSMUSG00000018474	Chd3	99	96.660	Mus_musculus
ENSJJAG00000017633	Chd3	100	96.641	MGP_PahariEiJ_G0017695	Chd3	100	96.764	Mus_pahari
ENSJJAG00000017633	Chd3	100	96.539	MGP_SPRETEiJ_G0017400	Chd3	100	96.660	Mus_spretus
ENSJJAG00000017633	Chd3	87	96.966	ENSMPUG00000008861	CHD3	100	96.966	Mustela_putorius_furo
ENSJJAG00000017633	Chd3	100	96.242	ENSMLUG00000014643	-	100	95.207	Myotis_lucifugus
ENSJJAG00000017633	Chd3	100	97.051	ENSNGAG00000000773	Chd3	98	97.051	Nannospalax_galili
ENSJJAG00000017633	Chd3	86	75.713	ENSNBRG00000000636	chd3	98	76.092	Neolamprologus_brichardi
ENSJJAG00000017633	Chd3	98	95.298	ENSNLEG00000009770	CHD3	100	94.655	Nomascus_leucogenys
ENSJJAG00000017633	Chd3	88	90.498	ENSMEUG00000005852	CHD3	87	90.730	Notamacropus_eugenii
ENSJJAG00000017633	Chd3	95	95.355	ENSOPRG00000011069	CHD3	100	95.355	Ochotona_princeps
ENSJJAG00000017633	Chd3	100	96.899	ENSODEG00000017785	CHD3	99	96.900	Octodon_degus
ENSJJAG00000017633	Chd3	77	77.946	ENSONIG00000009292	chd3	100	75.115	Oreochromis_niloticus
ENSJJAG00000017633	Chd3	99	92.167	ENSOCUG00000029299	CHD3	100	92.323	Oryctolagus_cuniculus
ENSJJAG00000017633	Chd3	83	72.034	ENSORLG00000007107	chd3	96	71.463	Oryzias_latipes
ENSJJAG00000017633	Chd3	58	72.992	ENSORLG00020008387	chd3	95	73.786	Oryzias_latipes_hni
ENSJJAG00000017633	Chd3	72	80.357	ENSOMEG00000013691	chd3	99	78.333	Oryzias_melastigma
ENSJJAG00000017633	Chd3	100	96.797	ENSOGAG00000003216	CHD3	99	96.799	Otolemur_garnettii
ENSJJAG00000017633	Chd3	100	94.619	ENSOARG00000017855	CHD3	99	94.200	Ovis_aries
ENSJJAG00000017633	Chd3	100	95.413	ENSPPAG00000032886	CHD3	100	94.433	Pan_paniscus
ENSJJAG00000017633	Chd3	100	97.258	ENSPPRG00000000626	CHD3	99	96.294	Panthera_pardus
ENSJJAG00000017633	Chd3	100	97.879	ENSPTRG00000008714	CHD3	100	96.802	Pan_troglodytes
ENSJJAG00000017633	Chd3	100	97.509	ENSPANG00000023938	CHD3	100	96.602	Papio_anubis
ENSJJAG00000017633	Chd3	99	75.612	ENSPKIG00000006305	chd3	99	79.421	Paramormyrops_kingsleyae
ENSJJAG00000017633	Chd3	56	90.237	ENSPSIG00000010177	CHD3	98	90.511	Pelodiscus_sinensis
ENSJJAG00000017633	Chd3	100	96.189	ENSPEMG00000014262	Chd3	99	96.189	Peromyscus_maniculatus_bairdii
ENSJJAG00000017633	Chd3	100	93.111	ENSPCIG00000005442	CHD3	99	93.368	Phascolarctos_cinereus
ENSJJAG00000017633	Chd3	92	80.137	ENSPFOG00000012464	chd3	92	73.774	Poecilia_formosa
ENSJJAG00000017633	Chd3	87	83.401	ENSPLAG00000002887	chd3	96	83.401	Poecilia_latipinna
ENSJJAG00000017633	Chd3	54	81.257	ENSPMEG00000016725	chd3	94	72.987	Poecilia_mexicana
ENSJJAG00000017633	Chd3	97	75.359	ENSPREG00000011044	chd3	99	78.309	Poecilia_reticulata
ENSJJAG00000017633	Chd3	98	94.715	ENSPPYG00000007940	CHD3	98	94.715	Pongo_abelii
ENSJJAG00000017633	Chd3	96	96.841	ENSPCAG00000004350	CHD3	96	96.841	Procavia_capensis
ENSJJAG00000017633	Chd3	100	97.310	ENSPCOG00000020952	CHD3	100	96.296	Propithecus_coquereli
ENSJJAG00000017633	Chd3	87	95.586	ENSPVAG00000016344	CHD3	87	95.586	Pteropus_vampyrus
ENSJJAG00000017633	Chd3	95	78.792	ENSPNAG00000020393	chd3	98	80.028	Pygocentrus_nattereri
ENSJJAG00000017633	Chd3	93	95.752	ENSRNOG00000009722	Chd3	100	95.752	Rattus_norvegicus
ENSJJAG00000017633	Chd3	100	94.535	ENSRBIG00000033562	CHD3	100	93.534	Rhinopithecus_bieti
ENSJJAG00000017633	Chd3	100	97.672	ENSRROG00000029554	CHD3	98	97.672	Rhinopithecus_roxellana
ENSJJAG00000017633	Chd3	100	97.775	ENSSBOG00000020719	CHD3	99	97.051	Saimiri_boliviensis_boliviensis
ENSJJAG00000017633	Chd3	99	93.925	ENSSHAG00000014412	CHD3	100	94.029	Sarcophilus_harrisii
ENSJJAG00000017633	Chd3	88	80.582	ENSSFOG00015023123	chd3	98	75.229	Scleropages_formosus
ENSJJAG00000017633	Chd3	79	91.358	ENSSMAG00000006451	chd3	99	77.297	Scophthalmus_maximus
ENSJJAG00000017633	Chd3	56	72.619	ENSSDUG00000005792	chd3	95	73.443	Seriola_dumerili
ENSJJAG00000017633	Chd3	92	80.756	ENSSPAG00000013694	chd3	99	80.115	Stegastes_partitus
ENSJJAG00000017633	Chd3	100	96.799	ENSSSCG00000021363	CHD3	100	96.728	Sus_scrofa
ENSJJAG00000017633	Chd3	77	76.560	ENSTRUG00000014990	chd3	89	76.568	Takifugu_rubripes
ENSJJAG00000017633	Chd3	98	73.526	ENSTNIG00000012998	chd3	99	73.394	Tetraodon_nigroviridis
ENSJJAG00000017633	Chd3	65	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSJJAG00000017633	Chd3	99	97.529	ENSTTRG00000010295	CHD3	97	97.529	Tursiops_truncatus
ENSJJAG00000017633	Chd3	93	96.081	ENSUAMG00000005475	CHD3	99	96.081	Ursus_americanus
ENSJJAG00000017633	Chd3	57	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSJJAG00000017633	Chd3	96	97.462	ENSVVUG00000028011	CHD3	99	97.176	Vulpes_vulpes
ENSJJAG00000017633	Chd3	99	72.149	ENSXETG00000012991	chd3	97	71.036	Xenopus_tropicalis
ENSJJAG00000017633	Chd3	53	82.864	ENSXCOG00000000809	chd3	96	83.089	Xiphophorus_couchianus
ENSJJAG00000017633	Chd3	80	86.127	ENSXMAG00000016035	chd3	99	86.127	Xiphophorus_maculatus