EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000017840 (Gene tree)
Gene ID: -
Gene Symbol: Tarbp1
Alias: Gm17296
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 75033 bases
Position: chrJH725468.1:3473916-3548948
Accession: 101610623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000015795	SpoU_methylase	PF00588.19	4.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000022302	-	4299	XM_012949013	ENSJJAP00000015795	1432 (aa)	XP_012804467	-

Gene Model

Click here to download ENSJJAG00000017840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000017840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000017840	Tarbp1	99	73.875	ENSG00000059588	TARBP1	93	73.875	Homo_sapiens
ENSJJAG00000017840	Tarbp1	95	42.635	ENSAPOG00000016419	si:dkey-85a20.4	85	42.635	Acanthochromis_polyacanthus
ENSJJAG00000017840	Tarbp1	94	74.560	ENSAMEG00000003359	TARBP1	99	74.560	Ailuropoda_melanoleuca
ENSJJAG00000017840	Tarbp1	94	42.244	ENSATEG00000020266	si:dkey-85a20.4	84	42.094	Anabas_testudineus
ENSJJAG00000017840	Tarbp1	93	59.796	ENSAPLG00000007666	TARBP1	99	60.227	Anas_platyrhynchos
ENSJJAG00000017840	Tarbp1	93	55.865	ENSACAG00000001142	TARBP1	85	55.792	Anolis_carolinensis
ENSJJAG00000017840	Tarbp1	99	70.207	ENSANAG00000022031	TARBP1	95	70.207	Aotus_nancymaae
ENSJJAG00000017840	Tarbp1	99	71.843	ENSBTAG00000004517	TARBP1	94	70.733	Bos_taurus
ENSJJAG00000017840	Tarbp1	99	73.570	ENSCJAG00000018155	TARBP1	91	73.570	Callithrix_jacchus
ENSJJAG00000017840	Tarbp1	94	73.397	ENSCAFG00000011533	TARBP1	97	73.397	Canis_familiaris
ENSJJAG00000017840	Tarbp1	99	72.429	ENSCAFG00020027141	TARBP1	92	72.429	Canis_lupus_dingo
ENSJJAG00000017840	Tarbp1	99	71.232	ENSCHIG00000011437	TARBP1	91	71.387	Capra_hircus
ENSJJAG00000017840	Tarbp1	90	73.089	ENSTSYG00000010382	TARBP1	97	73.318	Carlito_syrichta
ENSJJAG00000017840	Tarbp1	88	66.013	ENSCAPG00000010831	TARBP1	100	66.248	Cavia_aperea
ENSJJAG00000017840	Tarbp1	99	74.835	ENSCPOG00000013995	TARBP1	93	74.835	Cavia_porcellus
ENSJJAG00000017840	Tarbp1	99	72.915	ENSCCAG00000037278	TARBP1	93	76.539	Cebus_capucinus
ENSJJAG00000017840	Tarbp1	99	72.598	ENSCATG00000011754	TARBP1	94	72.598	Cercocebus_atys
ENSJJAG00000017840	Tarbp1	93	75.676	ENSCLAG00000003655	TARBP1	99	75.676	Chinchilla_lanigera
ENSJJAG00000017840	Tarbp1	88	73.266	ENSCSAG00000010100	TARBP1	99	73.266	Chlorocebus_sabaeus
ENSJJAG00000017840	Tarbp1	93	61.063	ENSCPBG00000005587	TARBP1	93	60.228	Chrysemys_picta_bellii
ENSJJAG00000017840	Tarbp1	94	73.711	ENSCANG00000034343	TARBP1	99	73.711	Colobus_angolensis_palliatus
ENSJJAG00000017840	Tarbp1	99	76.819	ENSCGRG00001016690	Tarbp1	95	76.819	Cricetulus_griseus_chok1gshd
ENSJJAG00000017840	Tarbp1	99	74.628	ENSCGRG00000016893	Tarbp1	99	74.628	Cricetulus_griseus_crigri
ENSJJAG00000017840	Tarbp1	94	40.738	ENSCSEG00000005255	si:dkey-85a20.4	81	47.066	Cynoglossus_semilaevis
ENSJJAG00000017840	Tarbp1	93	44.477	ENSDARG00000079055	si:dkey-85a20.4	99	54.059	Danio_rerio
ENSJJAG00000017840	Tarbp1	99	70.868	ENSDNOG00000008637	TARBP1	94	70.868	Dasypus_novemcinctus
ENSJJAG00000017840	Tarbp1	89	72.124	ENSDORG00000007984	Tarbp1	100	72.124	Dipodomys_ordii
ENSJJAG00000017840	Tarbp1	99	74.331	ENSEASG00005000252	TARBP1	96	74.331	Equus_asinus_asinus
ENSJJAG00000017840	Tarbp1	99	74.277	ENSECAG00000023673	TARBP1	95	72.832	Equus_caballus
ENSJJAG00000017840	Tarbp1	94	42.705	ENSELUG00000012193	si:dkey-85a20.4	85	42.562	Esox_lucius
ENSJJAG00000017840	Tarbp1	99	70.000	ENSFCAG00000014183	TARBP1	93	69.247	Felis_catus
ENSJJAG00000017840	Tarbp1	89	61.073	ENSFALG00000013565	TARBP1	99	60.853	Ficedula_albicollis
ENSJJAG00000017840	Tarbp1	89	71.320	ENSFDAG00000001308	TARBP1	100	71.243	Fukomys_damarensis
ENSJJAG00000017840	Tarbp1	96	49.616	ENSFHEG00000007565	si:dkey-85a20.4	87	49.616	Fundulus_heteroclitus
ENSJJAG00000017840	Tarbp1	93	41.973	ENSGMOG00000004549	si:dkey-85a20.4	98	41.817	Gadus_morhua
ENSJJAG00000017840	Tarbp1	94	56.808	ENSGALG00000011000	TARBP1	91	56.808	Gallus_gallus
ENSJJAG00000017840	Tarbp1	95	41.778	ENSGAFG00000007387	si:dkey-85a20.4	85	42.094	Gambusia_affinis
ENSJJAG00000017840	Tarbp1	94	41.894	ENSGACG00000005865	si:dkey-85a20.4	99	41.661	Gasterosteus_aculeatus
ENSJJAG00000017840	Tarbp1	99	62.692	ENSGAGG00000012102	TARBP1	98	60.999	Gopherus_agassizii
ENSJJAG00000017840	Tarbp1	94	72.515	ENSGGOG00000022879	TARBP1	99	72.442	Gorilla_gorilla
ENSJJAG00000017840	Tarbp1	94	43.228	ENSHBUG00000008877	si:dkey-85a20.4	83	43.175	Haplochromis_burtoni
ENSJJAG00000017840	Tarbp1	99	74.003	ENSHGLG00000011592	TARBP1	96	74.003	Heterocephalus_glaber_female
ENSJJAG00000017840	Tarbp1	99	74.363	ENSHGLG00100015169	TARBP1	100	74.363	Heterocephalus_glaber_male
ENSJJAG00000017840	Tarbp1	92	41.422	ENSIPUG00000005249	si:dkey-85a20.4	81	41.569	Ictalurus_punctatus
ENSJJAG00000017840	Tarbp1	99	70.222	ENSSTOG00000032291	TARBP1	99	70.291	Ictidomys_tridecemlineatus
ENSJJAG00000017840	Tarbp1	81	45.626	ENSKMAG00000017546	si:dkey-85a20.4	74	45.626	Kryptolebias_marmoratus
ENSJJAG00000017840	Tarbp1	81	49.735	ENSLBEG00000012132	si:dkey-85a20.4	79	49.736	Labrus_bergylta
ENSJJAG00000017840	Tarbp1	94	49.891	ENSLACG00000004337	TARBP1	83	49.891	Latimeria_chalumnae
ENSJJAG00000017840	Tarbp1	94	45.958	ENSLOCG00000016214	si:dkey-85a20.4	84	45.958	Lepisosteus_oculatus
ENSJJAG00000017840	Tarbp1	94	73.091	ENSLAFG00000011394	TARBP1	91	71.182	Loxodonta_africana
ENSJJAG00000017840	Tarbp1	99	69.097	ENSMFAG00000041068	TARBP1	96	69.097	Macaca_fascicularis
ENSJJAG00000017840	Tarbp1	99	69.028	ENSMMUG00000021703	TARBP1	95	69.028	Macaca_mulatta
ENSJJAG00000017840	Tarbp1	99	71.438	ENSMNEG00000045002	TARBP1	95	71.438	Macaca_nemestrina
ENSJJAG00000017840	Tarbp1	93	73.727	ENSMLEG00000044182	TARBP1	99	73.727	Mandrillus_leucophaeus
ENSJJAG00000017840	Tarbp1	94	43.157	ENSMAMG00000021760	si:dkey-85a20.4	84	43.157	Mastacembelus_armatus
ENSJJAG00000017840	Tarbp1	94	43.300	ENSMZEG00005005751	si:dkey-85a20.4	83	43.300	Maylandia_zebra
ENSJJAG00000017840	Tarbp1	99	75.209	ENSMAUG00000020968	Tarbp1	97	75.209	Mesocricetus_auratus
ENSJJAG00000017840	Tarbp1	99	66.836	ENSMICG00000015280	TARBP1	95	66.836	Microcebus_murinus
ENSJJAG00000017840	Tarbp1	99	75.089	ENSMOCG00000004128	Tarbp1	95	75.089	Microtus_ochrogaster
ENSJJAG00000017840	Tarbp1	94	41.121	ENSMMOG00000007795	si:dkey-85a20.4	84	41.265	Mola_mola
ENSJJAG00000017840	Tarbp1	99	65.474	ENSMODG00000008504	TARBP1	90	65.447	Monodelphis_domestica
ENSJJAG00000017840	Tarbp1	94	42.867	ENSMALG00000002916	si:dkey-85a20.4	85	42.837	Monopterus_albus
ENSJJAG00000017840	Tarbp1	99	75.071	MGP_CAROLIEiJ_G0031729	Tarbp1	95	75.071	Mus_caroli
ENSJJAG00000017840	Tarbp1	99	73.497	ENSMUSG00000090290	Tarbp1	97	73.497	Mus_musculus
ENSJJAG00000017840	Tarbp1	99	74.822	MGP_PahariEiJ_G0023326	Tarbp1	95	74.822	Mus_pahari
ENSJJAG00000017840	Tarbp1	99	73.478	MGP_SPRETEiJ_G0032846	Tarbp1	97	73.478	Mus_spretus
ENSJJAG00000017840	Tarbp1	86	71.945	ENSMPUG00000002802	TARBP1	99	71.945	Mustela_putorius_furo
ENSJJAG00000017840	Tarbp1	94	69.315	ENSMLUG00000002414	TARBP1	99	69.505	Myotis_lucifugus
ENSJJAG00000017840	Tarbp1	99	73.324	ENSNLEG00000002518	TARBP1	95	73.324	Nomascus_leucogenys
ENSJJAG00000017840	Tarbp1	63	69.099	ENSMEUG00000011370	-	59	69.099	Notamacropus_eugenii
ENSJJAG00000017840	Tarbp1	78	75.453	ENSOPRG00000013822	TARBP1	70	75.453	Ochotona_princeps
ENSJJAG00000017840	Tarbp1	99	72.603	ENSODEG00000005238	TARBP1	97	72.603	Octodon_degus
ENSJJAG00000017840	Tarbp1	94	43.156	ENSONIG00000009789	si:dkey-85a20.4	97	43.156	Oreochromis_niloticus
ENSJJAG00000017840	Tarbp1	99	74.321	ENSOCUG00000017418	TARBP1	90	74.321	Oryctolagus_cuniculus
ENSJJAG00000017840	Tarbp1	94	41.130	ENSORLG00000010529	si:dkey-85a20.4	84	41.004	Oryzias_latipes
ENSJJAG00000017840	Tarbp1	94	41.206	ENSORLG00020019264	si:dkey-85a20.4	84	41.134	Oryzias_latipes_hni
ENSJJAG00000017840	Tarbp1	94	40.945	ENSORLG00015003276	si:dkey-85a20.4	84	40.945	Oryzias_latipes_hsok
ENSJJAG00000017840	Tarbp1	99	70.746	ENSOGAG00000002379	TARBP1	93	70.746	Otolemur_garnettii
ENSJJAG00000017840	Tarbp1	99	68.106	ENSOARG00000003434	TARBP1	99	68.306	Ovis_aries
ENSJJAG00000017840	Tarbp1	94	74.431	ENSPPAG00000028097	TARBP1	99	74.431	Pan_paniscus
ENSJJAG00000017840	Tarbp1	99	68.596	ENSPPRG00000013561	TARBP1	99	66.781	Panthera_pardus
ENSJJAG00000017840	Tarbp1	92	72.288	ENSPTIG00000009281	TARBP1	99	72.288	Panthera_tigris_altaica
ENSJJAG00000017840	Tarbp1	99	73.039	ENSPTRG00000002124	TARBP1	95	73.039	Pan_troglodytes
ENSJJAG00000017840	Tarbp1	99	72.740	ENSPANG00000021933	TARBP1	94	72.740	Papio_anubis
ENSJJAG00000017840	Tarbp1	95	45.384	ENSPKIG00000016716	si:dkey-85a20.4	84	45.384	Paramormyrops_kingsleyae
ENSJJAG00000017840	Tarbp1	88	61.413	ENSPSIG00000010699	TARBP1	99	61.413	Pelodiscus_sinensis
ENSJJAG00000017840	Tarbp1	99	73.901	ENSPEMG00000006888	Tarbp1	99	74.035	Peromyscus_maniculatus_bairdii
ENSJJAG00000017840	Tarbp1	89	75.490	ENSPCIG00000029710	TARBP1	94	77.000	Phascolarctos_cinereus
ENSJJAG00000017840	Tarbp1	95	42.079	ENSPFOG00000013020	si:dkey-85a20.4	99	42.150	Poecilia_formosa
ENSJJAG00000017840	Tarbp1	95	41.990	ENSPLAG00000006044	si:dkey-85a20.4	85	42.131	Poecilia_latipinna
ENSJJAG00000017840	Tarbp1	95	41.990	ENSPMEG00000017857	si:dkey-85a20.4	85	42.340	Poecilia_mexicana
ENSJJAG00000017840	Tarbp1	95	42.321	ENSPREG00000022753	si:dkey-85a20.4	85	42.534	Poecilia_reticulata
ENSJJAG00000017840	Tarbp1	88	74.534	ENSPPYG00000000102	TARBP1	89	74.534	Pongo_abelii
ENSJJAG00000017840	Tarbp1	83	85.135	ENSPCAG00000004808	TARBP1	75	85.135	Procavia_capensis
ENSJJAG00000017840	Tarbp1	99	71.657	ENSPCOG00000005666	TARBP1	90	71.657	Propithecus_coquereli
ENSJJAG00000017840	Tarbp1	95	72.770	ENSPVAG00000014798	TARBP1	89	63.933	Pteropus_vampyrus
ENSJJAG00000017840	Tarbp1	94	42.507	ENSPNYG00000019135	si:dkey-85a20.4	83	42.507	Pundamilia_nyererei
ENSJJAG00000017840	Tarbp1	99	70.681	ENSRNOG00000053574	Tarbp1	94	70.681	Rattus_norvegicus
ENSJJAG00000017840	Tarbp1	99	66.417	ENSRBIG00000043362	TARBP1	99	66.417	Rhinopithecus_bieti
ENSJJAG00000017840	Tarbp1	99	72.254	ENSRROG00000029527	TARBP1	96	72.254	Rhinopithecus_roxellana
ENSJJAG00000017840	Tarbp1	99	71.508	ENSSBOG00000034503	TARBP1	99	71.508	Saimiri_boliviensis_boliviensis
ENSJJAG00000017840	Tarbp1	93	65.607	ENSSHAG00000000013	TARBP1	99	65.504	Sarcophilus_harrisii
ENSJJAG00000017840	Tarbp1	94	43.073	ENSSFOG00015002660	si:dkey-85a20.4	99	43.687	Scleropages_formosus
ENSJJAG00000017840	Tarbp1	94	43.491	ENSSMAG00000007081	si:dkey-85a20.4	83	43.562	Scophthalmus_maximus
ENSJJAG00000017840	Tarbp1	94	41.493	ENSSDUG00000023566	si:dkey-85a20.4	84	41.709	Seriola_dumerili
ENSJJAG00000017840	Tarbp1	94	42.908	ENSSLDG00000020200	si:dkey-85a20.4	84	43.141	Seriola_lalandi_dorsalis
ENSJJAG00000017840	Tarbp1	92	73.903	ENSSARG00000012207	TARBP1	84	73.903	Sorex_araneus
ENSJJAG00000017840	Tarbp1	99	59.638	ENSSPUG00000015364	TARBP1	91	59.782	Sphenodon_punctatus
ENSJJAG00000017840	Tarbp1	94	42.173	ENSSPAG00000007213	si:dkey-85a20.4	85	41.990	Stegastes_partitus
ENSJJAG00000017840	Tarbp1	99	73.440	ENSSSCG00000010160	TARBP1	90	77.612	Sus_scrofa
ENSJJAG00000017840	Tarbp1	90	61.052	ENSTGUG00000010214	TARBP1	100	60.976	Taeniopygia_guttata
ENSJJAG00000017840	Tarbp1	94	41.541	ENSTNIG00000016586	si:dkey-85a20.4	99	41.613	Tetraodon_nigroviridis
ENSJJAG00000017840	Tarbp1	94	68.998	ENSTTRG00000008707	TARBP1	90	68.968	Tursiops_truncatus
ENSJJAG00000017840	Tarbp1	91	73.906	ENSUMAG00000006730	TARBP1	99	73.906	Ursus_maritimus
ENSJJAG00000017840	Tarbp1	75	81.000	ENSVPAG00000007665	TARBP1	79	81.000	Vicugna_pacos
ENSJJAG00000017840	Tarbp1	95	73.270	ENSVVUG00000007460	TARBP1	97	73.270	Vulpes_vulpes
ENSJJAG00000017840	Tarbp1	94	51.383	ENSXETG00000016224	tarbp1	99	51.383	Xenopus_tropicalis
ENSJJAG00000017840	Tarbp1	85	47.613	ENSXCOG00000011779	si:dkey-85a20.4	91	47.613	Xiphophorus_couchianus
ENSJJAG00000017840	Tarbp1	71	40.460	ENSXMAG00000009600	si:dkey-85a20.4	97	40.667	Xiphophorus_maculatus