EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000018012 (Gene tree)
Gene ID: 101604776
Gene Symbol: Trmt13
Alias: 4631408H19Rik|A930028L21Rik|Ccdc76
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 23695 bases
Position: chrJH725504.1:563892-587586
Accession: 101604776
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000016030	TRM13	PF05206.14	1.6e-92	1	1
ENSJJAP00000016034	TRM13	PF05206.14	1.6e-92	1	1
ENSJJAP00000016030	zf-U11-48K	PF05253.12	3.1e-09	1	1
ENSJJAP00000016034	zf-U11-48K	PF05253.12	3.1e-09	1	1
ENSJJAP00000016030	zf-TRM13_CCCH	PF11722.8	2.5e-13	1	1
ENSJJAP00000016034	zf-TRM13_CCCH	PF11722.8	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000022542	-	1443	-	ENSJJAP00000016034	480 (aa)	-	-
ENSJJAT00000022538	-	1842	XM_004663946	ENSJJAP00000016030	477 (aa)	XP_004664003	-

Gene Model

Click here to download ENSJJAG00000018012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018012	Trmt13	100	87.708	ENSG00000122435	TRMT13	99	88.235	Homo_sapiens
ENSJJAG00000018012	Trmt13	96	48.290	ENSAPOG00000015131	trmt13	99	48.290	Acanthochromis_polyacanthus
ENSJJAG00000018012	Trmt13	100	86.486	ENSAMEG00000008917	TRMT13	100	86.486	Ailuropoda_melanoleuca
ENSJJAG00000018012	Trmt13	98	49.793	ENSACIG00000005804	trmt13	97	49.167	Amphilophus_citrinellus
ENSJJAG00000018012	Trmt13	96	49.004	ENSAOCG00000023585	trmt13	99	49.004	Amphiprion_ocellaris
ENSJJAG00000018012	Trmt13	96	49.004	ENSAPEG00000004025	trmt13	99	49.004	Amphiprion_percula
ENSJJAG00000018012	Trmt13	98	50.731	ENSATEG00000006597	trmt13	98	50.731	Anabas_testudineus
ENSJJAG00000018012	Trmt13	88	65.258	ENSAPLG00000014924	TRMT13	99	65.258	Anas_platyrhynchos
ENSJJAG00000018012	Trmt13	99	62.288	ENSACAG00000003498	TRMT13	100	62.288	Anolis_carolinensis
ENSJJAG00000018012	Trmt13	100	87.917	ENSANAG00000019525	TRMT13	99	88.445	Aotus_nancymaae
ENSJJAG00000018012	Trmt13	97	52.331	ENSACLG00000020018	trmt13	99	52.331	Astatotilapia_calliptera
ENSJJAG00000018012	Trmt13	98	53.445	ENSAMXG00000017963	trmt13	99	54.054	Astyanax_mexicanus
ENSJJAG00000018012	Trmt13	100	85.863	ENSBTAG00000015781	TRMT13	100	85.863	Bos_taurus
ENSJJAG00000018012	Trmt13	100	86.042	ENSCJAG00000000200	TRMT13	99	86.555	Callithrix_jacchus
ENSJJAG00000018012	Trmt13	66	86.624	ENSCAFG00000020021	TRMT13	99	86.624	Canis_familiaris
ENSJJAG00000018012	Trmt13	56	91.011	ENSCAFG00020011572	TRMT13	94	90.406	Canis_lupus_dingo
ENSJJAG00000018012	Trmt13	100	86.071	ENSCHIG00000015395	TRMT13	100	86.071	Capra_hircus
ENSJJAG00000018012	Trmt13	98	79.618	ENSTSYG00000010811	TRMT13	98	82.828	Carlito_syrichta
ENSJJAG00000018012	Trmt13	76	66.116	ENSCAPG00000009085	TRMT13	100	66.575	Cavia_aperea
ENSJJAG00000018012	Trmt13	99	86.250	ENSCPOG00000000694	TRMT13	99	86.250	Cavia_porcellus
ENSJJAG00000018012	Trmt13	100	88.333	ENSCCAG00000023772	TRMT13	99	88.866	Cebus_capucinus
ENSJJAG00000018012	Trmt13	99	88.421	ENSCATG00000033556	TRMT13	99	88.421	Cercocebus_atys
ENSJJAG00000018012	Trmt13	90	80.796	ENSCLAG00000008220	TRMT13	100	81.499	Chinchilla_lanigera
ENSJJAG00000018012	Trmt13	100	88.125	ENSCSAG00000001506	TRMT13	99	88.655	Chlorocebus_sabaeus
ENSJJAG00000018012	Trmt13	99	67.227	ENSCPBG00000026671	TRMT13	99	67.227	Chrysemys_picta_bellii
ENSJJAG00000018012	Trmt13	100	88.333	ENSCANG00000034659	TRMT13	99	88.866	Colobus_angolensis_palliatus
ENSJJAG00000018012	Trmt13	99	85.563	ENSCGRG00001021601	Trmt13	98	85.563	Cricetulus_griseus_chok1gshd
ENSJJAG00000018012	Trmt13	54	80.934	ENSCGRG00000000093	-	99	80.934	Cricetulus_griseus_crigri
ENSJJAG00000018012	Trmt13	99	46.610	ENSCSEG00000000591	trmt13	99	46.610	Cynoglossus_semilaevis
ENSJJAG00000018012	Trmt13	96	48.745	ENSCVAG00000017342	trmt13	93	50.000	Cyprinodon_variegatus
ENSJJAG00000018012	Trmt13	98	56.448	ENSDARG00000102846	trmt13	98	56.448	Danio_rerio
ENSJJAG00000018012	Trmt13	56	87.132	ENSDNOG00000001710	TRMT13	84	86.545	Dasypus_novemcinctus
ENSJJAG00000018012	Trmt13	100	84.615	ENSDORG00000015808	Trmt13	99	84.615	Dipodomys_ordii
ENSJJAG00000018012	Trmt13	98	31.612	FBgn0037435	CG18048	95	31.612	Drosophila_melanogaster
ENSJJAG00000018012	Trmt13	98	73.404	ENSETEG00000005819	TRMT13	97	73.404	Echinops_telfairi
ENSJJAG00000018012	Trmt13	95	43.966	ENSEBUG00000014444	trmt13	96	43.991	Eptatretus_burgeri
ENSJJAG00000018012	Trmt13	100	88.358	ENSEASG00005015918	TRMT13	100	88.358	Equus_asinus_asinus
ENSJJAG00000018012	Trmt13	100	87.942	ENSECAG00000022626	TRMT13	100	87.942	Equus_caballus
ENSJJAG00000018012	Trmt13	78	80.952	ENSEEUG00000000294	TRMT13	78	80.952	Erinaceus_europaeus
ENSJJAG00000018012	Trmt13	97	55.675	ENSELUG00000003803	trmt13	98	55.675	Esox_lucius
ENSJJAG00000018012	Trmt13	100	87.110	ENSFCAG00000030618	TRMT13	100	88.991	Felis_catus
ENSJJAG00000018012	Trmt13	97	64.502	ENSFALG00000002424	TRMT13	96	64.502	Ficedula_albicollis
ENSJJAG00000018012	Trmt13	99	86.555	ENSFDAG00000006342	TRMT13	99	86.555	Fukomys_damarensis
ENSJJAG00000018012	Trmt13	79	51.414	ENSFHEG00000022954	trmt13	97	50.739	Fundulus_heteroclitus
ENSJJAG00000018012	Trmt13	95	48.352	ENSGMOG00000013223	trmt13	100	48.791	Gadus_morhua
ENSJJAG00000018012	Trmt13	97	63.519	ENSGALG00000005290	TRMT13	99	62.994	Gallus_gallus
ENSJJAG00000018012	Trmt13	76	51.344	ENSGAFG00000001577	trmt13	81	51.344	Gambusia_affinis
ENSJJAG00000018012	Trmt13	99	49.476	ENSGACG00000013428	trmt13	100	49.792	Gasterosteus_aculeatus
ENSJJAG00000018012	Trmt13	98	68.230	ENSGAGG00000023303	TRMT13	95	74.046	Gopherus_agassizii
ENSJJAG00000018012	Trmt13	100	87.500	ENSGGOG00000005616	TRMT13	99	88.025	Gorilla_gorilla
ENSJJAG00000018012	Trmt13	97	52.754	ENSHBUG00000007754	trmt13	99	52.754	Haplochromis_burtoni
ENSJJAG00000018012	Trmt13	99	87.395	ENSHGLG00000002164	TRMT13	99	87.395	Heterocephalus_glaber_female
ENSJJAG00000018012	Trmt13	99	87.395	ENSHGLG00100001618	TRMT13	99	87.395	Heterocephalus_glaber_male
ENSJJAG00000018012	Trmt13	97	47.425	ENSHCOG00000020553	trmt13	98	47.425	Hippocampus_comes
ENSJJAG00000018012	Trmt13	98	55.508	ENSIPUG00000024787	trmt13	100	56.303	Ictalurus_punctatus
ENSJJAG00000018012	Trmt13	99	90.275	ENSSTOG00000013483	TRMT13	98	90.275	Ictidomys_tridecemlineatus
ENSJJAG00000018012	Trmt13	65	49.371	ENSKMAG00000007639	trmt13	92	49.673	Kryptolebias_marmoratus
ENSJJAG00000018012	Trmt13	97	49.580	ENSLBEG00000020238	trmt13	99	49.895	Labrus_bergylta
ENSJJAG00000018012	Trmt13	99	59.579	ENSLACG00000013153	TRMT13	100	59.579	Latimeria_chalumnae
ENSJJAG00000018012	Trmt13	97	57.359	ENSLOCG00000000418	trmt13	97	57.609	Lepisosteus_oculatus
ENSJJAG00000018012	Trmt13	78	84.865	ENSLAFG00000002383	TRMT13	100	84.865	Loxodonta_africana
ENSJJAG00000018012	Trmt13	100	87.917	ENSMFAG00000034681	TRMT13	99	88.445	Macaca_fascicularis
ENSJJAG00000018012	Trmt13	100	87.917	ENSMMUG00000004243	TRMT13	99	88.445	Macaca_mulatta
ENSJJAG00000018012	Trmt13	100	87.917	ENSMNEG00000036102	TRMT13	99	88.445	Macaca_nemestrina
ENSJJAG00000018012	Trmt13	99	88.842	ENSMLEG00000034258	TRMT13	99	88.842	Mandrillus_leucophaeus
ENSJJAG00000018012	Trmt13	97	50.851	ENSMAMG00000016597	trmt13	97	50.851	Mastacembelus_armatus
ENSJJAG00000018012	Trmt13	97	52.119	ENSMZEG00005020959	trmt13	99	52.119	Maylandia_zebra
ENSJJAG00000018012	Trmt13	89	64.775	ENSMGAG00000006970	TRMT13	99	64.775	Meleagris_gallopavo
ENSJJAG00000018012	Trmt13	99	83.333	ENSMAUG00000010448	Trmt13	98	83.333	Mesocricetus_auratus
ENSJJAG00000018012	Trmt13	100	88.565	ENSMICG00000005283	TRMT13	100	88.991	Microcebus_murinus
ENSJJAG00000018012	Trmt13	99	81.741	ENSMOCG00000019914	Trmt13	98	81.741	Microtus_ochrogaster
ENSJJAG00000018012	Trmt13	54	49.811	ENSMMOG00000007762	trmt13	89	49.811	Mola_mola
ENSJJAG00000018012	Trmt13	98	75.636	ENSMODG00000003646	TRMT13	97	75.636	Monodelphis_domestica
ENSJJAG00000018012	Trmt13	97	49.467	ENSMALG00000020965	trmt13	97	49.460	Monopterus_albus
ENSJJAG00000018012	Trmt13	99	84.355	MGP_CAROLIEiJ_G0025568	Trmt13	94	90.476	Mus_caroli
ENSJJAG00000018012	Trmt13	99	84.567	ENSMUSG00000033439	Trmt13	94	90.476	Mus_musculus
ENSJJAG00000018012	Trmt13	99	85.624	MGP_PahariEiJ_G0027014	Trmt13	93	90.964	Mus_pahari
ENSJJAG00000018012	Trmt13	99	84.989	MGP_SPRETEiJ_G0026518	Trmt13	94	90.476	Mus_spretus
ENSJJAG00000018012	Trmt13	80	84.777	ENSMPUG00000002078	-	100	84.777	Mustela_putorius_furo
ENSJJAG00000018012	Trmt13	99	77.292	ENSMLUG00000002124	TRMT13	99	77.292	Myotis_lucifugus
ENSJJAG00000018012	Trmt13	98	47.379	ENSNBRG00000006783	trmt13	97	49.359	Neolamprologus_brichardi
ENSJJAG00000018012	Trmt13	100	87.708	ENSNLEG00000035917	TRMT13	99	88.235	Nomascus_leucogenys
ENSJJAG00000018012	Trmt13	51	71.774	ENSMEUG00000013346	-	100	71.774	Notamacropus_eugenii
ENSJJAG00000018012	Trmt13	65	89.354	ENSOPRG00000012048	TRMT13	64	89.354	Ochotona_princeps
ENSJJAG00000018012	Trmt13	97	52.119	ENSONIG00000004574	trmt13	99	52.119	Oreochromis_niloticus
ENSJJAG00000018012	Trmt13	90	70.766	ENSOANG00000012057	TRMT13	99	70.766	Ornithorhynchus_anatinus
ENSJJAG00000018012	Trmt13	100	86.694	ENSOCUG00000023095	TRMT13	100	86.694	Oryctolagus_cuniculus
ENSJJAG00000018012	Trmt13	97	47.447	ENSORLG00000003320	trmt13	99	48.085	Oryzias_latipes
ENSJJAG00000018012	Trmt13	96	46.868	ENSORLG00020005972	trmt13	97	47.890	Oryzias_latipes_hni
ENSJJAG00000018012	Trmt13	97	51.915	ENSORLG00015002270	trmt13	99	51.915	Oryzias_latipes_hsok
ENSJJAG00000018012	Trmt13	97	51.277	ENSOMEG00000006724	trmt13	94	51.277	Oryzias_melastigma
ENSJJAG00000018012	Trmt13	98	88.584	ENSOGAG00000005618	TRMT13	97	88.333	Otolemur_garnettii
ENSJJAG00000018012	Trmt13	100	86.071	ENSOARG00000017983	TRMT13	100	86.071	Ovis_aries
ENSJJAG00000018012	Trmt13	100	87.292	ENSPPAG00000043736	TRMT13	99	87.815	Pan_paniscus
ENSJJAG00000018012	Trmt13	100	87.526	ENSPPRG00000003424	TRMT13	100	88.991	Panthera_pardus
ENSJJAG00000018012	Trmt13	100	87.526	ENSPTIG00000018598	TRMT13	100	88.991	Panthera_tigris_altaica
ENSJJAG00000018012	Trmt13	100	87.292	ENSPTRG00000001001	TRMT13	99	87.815	Pan_troglodytes
ENSJJAG00000018012	Trmt13	100	88.125	ENSPANG00000007598	TRMT13	99	88.655	Papio_anubis
ENSJJAG00000018012	Trmt13	96	54.881	ENSPKIG00000001514	trmt13	98	54.881	Paramormyrops_kingsleyae
ENSJJAG00000018012	Trmt13	87	67.146	ENSPSIG00000012703	TRMT13	99	67.146	Pelodiscus_sinensis
ENSJJAG00000018012	Trmt13	97	51.717	ENSPMGG00000013298	trmt13	94	51.717	Periophthalmus_magnuspinnatus
ENSJJAG00000018012	Trmt13	99	83.652	ENSPEMG00000000275	Trmt13	98	83.652	Peromyscus_maniculatus_bairdii
ENSJJAG00000018012	Trmt13	96	44.561	ENSPMAG00000000823	trmt13	97	44.561	Petromyzon_marinus
ENSJJAG00000018012	Trmt13	99	73.109	ENSPCIG00000007699	TRMT13	99	73.739	Phascolarctos_cinereus
ENSJJAG00000018012	Trmt13	99	49.362	ENSPFOG00000008675	trmt13	98	49.362	Poecilia_formosa
ENSJJAG00000018012	Trmt13	96	48.936	ENSPLAG00000009709	trmt13	99	48.936	Poecilia_latipinna
ENSJJAG00000018012	Trmt13	96	47.872	ENSPMEG00000022954	trmt13	99	47.872	Poecilia_mexicana
ENSJJAG00000018012	Trmt13	76	51.075	ENSPREG00000005645	trmt13	94	48.601	Poecilia_reticulata
ENSJJAG00000018012	Trmt13	100	87.917	ENSPPYG00000001120	TRMT13	99	88.445	Pongo_abelii
ENSJJAG00000018012	Trmt13	99	85.106	ENSPCAG00000002340	TRMT13	98	85.106	Procavia_capensis
ENSJJAG00000018012	Trmt13	100	88.981	ENSPCOG00000017984	TRMT13	100	89.908	Propithecus_coquereli
ENSJJAG00000018012	Trmt13	99	87.292	ENSPVAG00000017430	TRMT13	99	87.292	Pteropus_vampyrus
ENSJJAG00000018012	Trmt13	97	51.064	ENSPNYG00000013690	trmt13	99	51.064	Pundamilia_nyererei
ENSJJAG00000018012	Trmt13	98	53.602	ENSPNAG00000022130	trmt13	99	53.602	Pygocentrus_nattereri
ENSJJAG00000018012	Trmt13	98	85.075	ENSRNOG00000015140	Trmt13	95	85.075	Rattus_norvegicus
ENSJJAG00000018012	Trmt13	100	88.333	ENSRBIG00000037686	TRMT13	99	88.866	Rhinopithecus_bieti
ENSJJAG00000018012	Trmt13	100	88.333	ENSRROG00000044057	TRMT13	99	88.866	Rhinopithecus_roxellana
ENSJJAG00000018012	Trmt13	100	87.708	ENSSBOG00000026541	TRMT13	99	88.235	Saimiri_boliviensis_boliviensis
ENSJJAG00000018012	Trmt13	91	73.624	ENSSHAG00000005213	TRMT13	97	73.624	Sarcophilus_harrisii
ENSJJAG00000018012	Trmt13	97	52.239	ENSSFOG00015017560	trmt13	98	52.903	Scleropages_formosus
ENSJJAG00000018012	Trmt13	99	49.897	ENSSMAG00000014592	trmt13	99	49.897	Scophthalmus_maximus
ENSJJAG00000018012	Trmt13	98	49.590	ENSSDUG00000015508	trmt13	98	49.696	Seriola_dumerili
ENSJJAG00000018012	Trmt13	98	49.489	ENSSLDG00000019060	trmt13	98	49.284	Seriola_lalandi_dorsalis
ENSJJAG00000018012	Trmt13	99	74.473	ENSSARG00000010344	TRMT13	99	74.473	Sorex_araneus
ENSJJAG00000018012	Trmt13	96	67.396	ENSSPUG00000016339	TRMT13	99	67.396	Sphenodon_punctatus
ENSJJAG00000018012	Trmt13	95	52.463	ENSSPAG00000011922	trmt13	99	52.211	Stegastes_partitus
ENSJJAG00000018012	Trmt13	100	87.318	ENSSSCG00000006869	TRMT13	100	87.318	Sus_scrofa
ENSJJAG00000018012	Trmt13	98	64.026	ENSTGUG00000005253	TRMT13	99	64.026	Taeniopygia_guttata
ENSJJAG00000018012	Trmt13	96	49.680	ENSTRUG00000008400	trmt13	99	49.686	Takifugu_rubripes
ENSJJAG00000018012	Trmt13	87	72.115	ENSTBEG00000008911	TRMT13	100	72.115	Tupaia_belangeri
ENSJJAG00000018012	Trmt13	51	94.737	ENSTTRG00000015302	-	60	94.737	Tursiops_truncatus
ENSJJAG00000018012	Trmt13	100	81.705	ENSUAMG00000017251	TRMT13	100	81.705	Ursus_americanus
ENSJJAG00000018012	Trmt13	100	86.902	ENSUMAG00000007901	TRMT13	100	86.902	Ursus_maritimus
ENSJJAG00000018012	Trmt13	91	70.602	ENSVPAG00000001034	TRMT13	100	70.602	Vicugna_pacos
ENSJJAG00000018012	Trmt13	99	87.158	ENSVVUG00000021996	TRMT13	99	87.158	Vulpes_vulpes
ENSJJAG00000018012	Trmt13	96	55.556	ENSXETG00000013204	trmt13	96	55.556	Xenopus_tropicalis
ENSJJAG00000018012	Trmt13	96	48.298	ENSXMAG00000010765	trmt13	99	48.298	Xiphophorus_maculatus