EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000018099 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 9769 bases
Position: chrJH725497.1:14361628-14371396
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000016161	Smg4_UPF3	PF03467.15	6.5e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000022669	-	642	-	ENSJJAP00000016161	213 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000018099's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018099	-	70	67.333	ENSG00000125351	UPF3B	70	66.887	Homo_sapiens
ENSJJAG00000018099	-	98	78.571	ENSG00000169062	UPF3A	99	70.192	Homo_sapiens
ENSJJAG00000018099	-	77	70.909	ENSACIG00000020468	upf3a	70	80.000	Amphilophus_citrinellus
ENSJJAG00000018099	-	77	57.669	ENSANAG00000033169	-	54	63.971	Aotus_nancymaae
ENSJJAG00000018099	-	75	64.151	ENSANAG00000021894	-	70	66.887	Aotus_nancymaae
ENSJJAG00000018099	-	83	57.627	ENSAMXG00000000199	upf3b	52	63.871	Astyanax_mexicanus
ENSJJAG00000018099	-	99	80.751	ENSBTAG00000047365	-	96	80.751	Bos_taurus
ENSJJAG00000018099	-	70	66.667	ENSCJAG00000004975	UPF3B	70	66.225	Callithrix_jacchus
ENSJJAG00000018099	-	75	64.151	ENSTSYG00000014690	UPF3B	71	60.759	Carlito_syrichta
ENSJJAG00000018099	-	70	54.667	ENSCCAG00000029813	-	50	54.305	Cebus_capucinus
ENSJJAG00000018099	-	70	67.333	ENSCATG00000017506	UPF3B	70	66.887	Cercocebus_atys
ENSJJAG00000018099	-	66	70.000	ENSCLAG00000000093	-	97	70.000	Chinchilla_lanigera
ENSJJAG00000018099	-	73	53.205	ENSCING00000008396	-	98	53.205	Ciona_intestinalis
ENSJJAG00000018099	-	91	74.510	ENSDNOG00000034391	UPF3A	50	72.072	Dasypus_novemcinctus
ENSJJAG00000018099	-	62	68.421	ENSFHEG00000010418	upf3a	63	74.138	Fundulus_heteroclitus
ENSJJAG00000018099	-	87	73.158	ENSGALG00000016815	-	99	69.907	Gallus_gallus
ENSJJAG00000018099	-	69	62.329	ENSGACG00000017435	upf3b	55	62.000	Gasterosteus_aculeatus
ENSJJAG00000018099	-	76	76.543	ENSGAGG00000001952	UPF3A	82	84.028	Gopherus_agassizii
ENSJJAG00000018099	-	70	67.333	ENSGGOG00000023995	UPF3B	58	70.175	Gorilla_gorilla
ENSJJAG00000018099	-	98	77.885	ENSHGLG00000001544	UPF3A	50	77.885	Heterocephalus_glaber_female
ENSJJAG00000018099	-	98	77.885	ENSHGLG00100013244	UPF3A	50	77.885	Heterocephalus_glaber_male
ENSJJAG00000018099	-	78	68.263	ENSHCOG00000013985	upf3a	65	72.727	Hippocampus_comes
ENSJJAG00000018099	-	99	83.962	ENSSTOG00000030282	-	89	83.962	Ictidomys_tridecemlineatus
ENSJJAG00000018099	-	70	53.459	ENSMFAG00000045275	-	76	53.459	Macaca_fascicularis
ENSJJAG00000018099	-	70	67.333	ENSMFAG00000045414	UPF3B	70	66.887	Macaca_fascicularis
ENSJJAG00000018099	-	70	67.333	ENSMMUG00000020222	UPF3B	70	66.887	Macaca_mulatta
ENSJJAG00000018099	-	74	51.205	ENSMMUG00000046682	-	76	52.903	Macaca_mulatta
ENSJJAG00000018099	-	70	52.830	ENSMNEG00000040898	-	76	52.830	Macaca_nemestrina
ENSJJAG00000018099	-	70	67.333	ENSMNEG00000039794	UPF3B	70	66.887	Macaca_nemestrina
ENSJJAG00000018099	-	70	67.333	ENSMLEG00000010999	UPF3B	70	66.887	Mandrillus_leucophaeus
ENSJJAG00000018099	-	68	67.123	ENSMICG00000042420	-	95	68.027	Microcebus_murinus
ENSJJAG00000018099	-	98	87.019	ENSMOCG00000000550	Upf3a	59	86.603	Microtus_ochrogaster
ENSJJAG00000018099	-	54	73.913	ENSMALG00000002454	-	64	73.913	Monopterus_albus
ENSJJAG00000018099	-	98	83.732	MGP_CAROLIEiJ_G0030848	Upf3a	51	83.732	Mus_caroli
ENSJJAG00000018099	-	98	84.211	MGP_SPRETEiJ_G0031958	Upf3a	50	84.211	Mus_spretus
ENSJJAG00000018099	-	84	56.742	ENSNBRG00000011560	upf3b	76	67.568	Neolamprologus_brichardi
ENSJJAG00000018099	-	81	50.289	ENSNLEG00000027516	-	71	54.967	Nomascus_leucogenys
ENSJJAG00000018099	-	70	67.333	ENSNLEG00000014897	UPF3B	61	70.175	Nomascus_leucogenys
ENSJJAG00000018099	-	81	48.837	ENSODEG00000006064	-	78	51.299	Octodon_degus
ENSJJAG00000018099	-	74	54.971	ENSODEG00000007164	-	65	59.184	Octodon_degus
ENSJJAG00000018099	-	99	75.943	ENSODEG00000009176	-	84	75.943	Octodon_degus
ENSJJAG00000018099	-	55	53.782	ENSODEG00000000596	-	59	52.941	Octodon_degus
ENSJJAG00000018099	-	69	61.905	ENSORLG00020003758	upf3b	52	61.184	Oryzias_latipes_hni
ENSJJAG00000018099	-	98	76.555	ENSOGAG00000004788	UPF3A	51	76.190	Otolemur_garnettii
ENSJJAG00000018099	-	70	67.333	ENSPPAG00000040390	UPF3B	58	70.175	Pan_paniscus
ENSJJAG00000018099	-	70	67.333	ENSPTRG00000022228	UPF3B	58	70.175	Pan_troglodytes
ENSJJAG00000018099	-	70	67.333	ENSPANG00000000900	UPF3B	70	66.887	Papio_anubis
ENSJJAG00000018099	-	74	51.205	ENSPANG00000029350	-	76	52.830	Papio_anubis
ENSJJAG00000018099	-	69	66.216	ENSPKIG00000019226	upf3b	74	67.826	Paramormyrops_kingsleyae
ENSJJAG00000018099	-	84	56.180	ENSPMGG00000016067	upf3b	54	63.514	Periophthalmus_magnuspinnatus
ENSJJAG00000018099	-	90	77.202	ENSPCIG00000019590	-	94	69.863	Phascolarctos_cinereus
ENSJJAG00000018099	-	82	66.854	ENSPLAG00000011960	upf3a	56	72.165	Poecilia_latipinna
ENSJJAG00000018099	-	50	67.925	ENSPREG00000012214	upf3b	74	66.667	Poecilia_reticulata
ENSJJAG00000018099	-	63	68.657	ENSPREG00000005566	upf3a	67	76.522	Poecilia_reticulata
ENSJJAG00000018099	-	70	66.000	ENSPNAG00000021528	upf3b	50	64.667	Pygocentrus_nattereri
ENSJJAG00000018099	-	98	84.135	ENSRNOG00000017397	Upf3a	51	84.135	Rattus_norvegicus
ENSJJAG00000018099	-	70	67.333	ENSRROG00000041031	UPF3B	70	66.887	Rhinopithecus_roxellana
ENSJJAG00000018099	-	70	67.333	ENSSBOG00000019740	UPF3B	71	67.333	Saimiri_boliviensis_boliviensis
ENSJJAG00000018099	-	68	76.552	ENSSMAG00000003858	upf3a	77	74.783	Scophthalmus_maximus
ENSJJAG00000018099	-	77	70.303	ENSSDUG00000009680	upf3a	69	76.106	Seriola_dumerili
ENSJJAG00000018099	-	77	70.909	ENSSPAG00000007938	upf3a	66	77.622	Stegastes_partitus
ENSJJAG00000018099	-	98	75.714	ENSSSCG00000024679	UPF3A	51	75.714	Sus_scrofa
ENSJJAG00000018099	-	77	63.190	ENSVVUG00000011594	UPF3B	71	66.887	Vulpes_vulpes
ENSJJAG00000018099	-	69	67.808	ENSXETG00000007440	upf3b	65	67.333	Xenopus_tropicalis
ENSJJAG00000018099	-	68	62.500	ENSXCOG00000016586	upf3b	74	65.766	Xiphophorus_couchianus