EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000018150 (Gene tree)
Gene ID: 101596898
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik
Full Name: ERCC excision repair 6 like 2
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 63320 bases
Position: chrJH725456.1:22077472-22140791
Accession: 101596898
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000016241	ResIII	PF04851.15	2.3e-11	1	1
ENSJJAP00000016246	ResIII	PF04851.15	7.3e-10	1	1
ENSJJAP00000016241	DEAD	PF00270.29	2.1e-07	1	1
ENSJJAP00000016246	DEAD	PF00270.29	8.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000022749	-	2203	XM_004656855	ENSJJAP00000016241	701 (aa)	XP_004656912	UPI000332F1C1
ENSJJAT00000022754	-	1398	-	ENSJJAP00000016246	465 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000018150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018150's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000018150	Ercc6l2	89	30.307	ENSJJAG00000022875	Ercc6l	50	30.307
ENSJJAG00000018150	Ercc6l2	59	31.081	ENSJJAG00000018858	-	75	31.081
ENSJJAG00000018150	Ercc6l2	83	31.614	ENSJJAG00000010314	Rad54b	59	31.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018150	Ercc6l2	100	88.730	ENSG00000182150	ERCC6L2	100	95.122	Homo_sapiens
ENSJJAG00000018150	Ercc6l2	92	86.946	ENSAMEG00000011657	ERCC6L2	98	86.281	Ailuropoda_melanoleuca
ENSJJAG00000018150	Ercc6l2	99	76.115	ENSAPLG00000006105	ERCC6L2	99	76.115	Anas_platyrhynchos
ENSJJAG00000018150	Ercc6l2	98	75.656	ENSACAG00000012947	ERCC6L2	100	75.656	Anolis_carolinensis
ENSJJAG00000018150	Ercc6l2	95	62.003	ENSACLG00000015088	ercc6l2	66	62.003	Astatotilapia_calliptera
ENSJJAG00000018150	Ercc6l2	100	88.873	ENSCJAG00000008862	ERCC6L2	98	88.873	Callithrix_jacchus
ENSJJAG00000018150	Ercc6l2	99	86.571	ENSCAFG00000001219	ERCC6L2	70	86.571	Canis_familiaris
ENSJJAG00000018150	Ercc6l2	100	88.017	ENSTSYG00000013871	ERCC6L2	99	88.017	Carlito_syrichta
ENSJJAG00000018150	Ercc6l2	92	78.923	ENSCAPG00000009212	ERCC6L2	100	78.923	Cavia_aperea
ENSJJAG00000018150	Ercc6l2	99	86.103	ENSCPOG00000004544	-	95	83.669	Cavia_porcellus
ENSJJAG00000018150	Ercc6l2	100	88.873	ENSCCAG00000026980	ERCC6L2	98	88.873	Cebus_capucinus
ENSJJAG00000018150	Ercc6l2	100	76.748	ENSCHOG00000006282	ERCC6L2	98	76.748	Choloepus_hoffmanni
ENSJJAG00000018150	Ercc6l2	100	88.873	ENSCANG00000039934	ERCC6L2	98	88.873	Colobus_angolensis_palliatus
ENSJJAG00000018150	Ercc6l2	100	87.732	ENSCGRG00001022738	Ercc6l2	99	87.732	Cricetulus_griseus_chok1gshd
ENSJJAG00000018150	Ercc6l2	92	87.850	ENSCGRG00000015854	Ercc6l2	66	89.474	Cricetulus_griseus_crigri
ENSJJAG00000018150	Ercc6l2	98	85.120	ENSDORG00000010788	Ercc6l2	98	86.031	Dipodomys_ordii
ENSJJAG00000018150	Ercc6l2	99	83.429	ENSETEG00000010686	ERCC6L2	98	83.429	Echinops_telfairi
ENSJJAG00000018150	Ercc6l2	100	69.472	ENSEEUG00000009341	ERCC6L2	99	69.472	Erinaceus_europaeus
ENSJJAG00000018150	Ercc6l2	98	77.080	ENSFALG00000003400	ERCC6L2	63	77.080	Ficedula_albicollis
ENSJJAG00000018150	Ercc6l2	99	86.695	ENSFDAG00000000805	ERCC6L2	99	86.695	Fukomys_damarensis
ENSJJAG00000018150	Ercc6l2	92	62.937	ENSGMOG00000007751	ercc6l2	61	65.359	Gadus_morhua
ENSJJAG00000018150	Ercc6l2	92	63.869	ENSGACG00000006992	ercc6l2	56	67.213	Gasterosteus_aculeatus
ENSJJAG00000018150	Ercc6l2	100	88.588	ENSGGOG00000002705	ERCC6L2	98	88.588	Gorilla_gorilla
ENSJJAG00000018150	Ercc6l2	80	93.220	ENSHGLG00000009488	ERCC6L2	95	91.713	Heterocephalus_glaber_female
ENSJJAG00000018150	Ercc6l2	100	85.491	ENSLAFG00000013092	ERCC6L2	100	85.491	Loxodonta_africana
ENSJJAG00000018150	Ercc6l2	100	88.588	ENSMNEG00000035630	ERCC6L2	98	88.588	Macaca_nemestrina
ENSJJAG00000018150	Ercc6l2	100	88.588	ENSMLEG00000019530	ERCC6L2	98	88.588	Mandrillus_leucophaeus
ENSJJAG00000018150	Ercc6l2	98	88.759	ENSMAUG00000004820	-	66	89.474	Mesocricetus_auratus
ENSJJAG00000018150	Ercc6l2	100	90.300	ENSMICG00000029160	ERCC6L2	98	90.300	Microcebus_murinus
ENSJJAG00000018150	Ercc6l2	98	89.327	ENSMOCG00000019362	-	96	88.717	Microtus_ochrogaster
ENSJJAG00000018150	Ercc6l2	98	61.151	ENSMMOG00000001419	ercc6l2	59	61.151	Mola_mola
ENSJJAG00000018150	Ercc6l2	98	63.464	ENSMALG00000016933	ercc6l2	60	67.040	Monopterus_albus
ENSJJAG00000018150	Ercc6l2	100	86.733	MGP_CAROLIEiJ_G0018635	-	100	87.445	Mus_caroli
ENSJJAG00000018150	Ercc6l2	100	87.019	ENSMUSG00000021470	Ercc6l2	100	87.019	Mus_musculus
ENSJJAG00000018150	Ercc6l2	100	87.732	MGP_PahariEiJ_G0019699	-	100	88.321	Mus_pahari
ENSJJAG00000018150	Ercc6l2	100	87.019	MGP_SPRETEiJ_G0019515	-	100	87.737	Mus_spretus
ENSJJAG00000018150	Ercc6l2	92	86.916	ENSMPUG00000006738	ERCC6L2	68	86.314	Mustela_putorius_furo
ENSJJAG00000018150	Ercc6l2	100	85.328	ENSMLUG00000000845	ERCC6L2	98	85.328	Myotis_lucifugus
ENSJJAG00000018150	Ercc6l2	100	87.732	ENSNGAG00000016174	Ercc6l2	99	87.732	Nannospalax_galili
ENSJJAG00000018150	Ercc6l2	100	89.158	ENSNLEG00000016784	ERCC6L2	98	89.158	Nomascus_leucogenys
ENSJJAG00000018150	Ercc6l2	92	85.981	ENSOPRG00000011647	ERCC6L2	100	87.781	Ochotona_princeps
ENSJJAG00000018150	Ercc6l2	100	86.040	ENSODEG00000016588	ERCC6L2	100	86.040	Octodon_degus
ENSJJAG00000018150	Ercc6l2	99	61.000	ENSONIG00000015139	ercc6l2	100	61.000	Oreochromis_niloticus
ENSJJAG00000018150	Ercc6l2	100	88.319	ENSOCUG00000000442	-	100	88.319	Oryctolagus_cuniculus
ENSJJAG00000018150	Ercc6l2	92	64.569	ENSORLG00000004287	ercc6l2	58	67.157	Oryzias_latipes
ENSJJAG00000018150	Ercc6l2	92	64.336	ENSORLG00015010250	ercc6l2	58	67.374	Oryzias_latipes_hsok
ENSJJAG00000018150	Ercc6l2	92	89.019	ENSOGAG00000003146	ERCC6L2	66	90.344	Otolemur_garnettii
ENSJJAG00000018150	Ercc6l2	99	87.714	ENSOARG00000008546	ERCC6L2	71	87.714	Ovis_aries
ENSJJAG00000018150	Ercc6l2	100	88.730	ENSPPAG00000035061	ERCC6L2	98	88.730	Pan_paniscus
ENSJJAG00000018150	Ercc6l2	100	87.447	ENSPPRG00000019238	ERCC6L2	98	87.447	Panthera_pardus
ENSJJAG00000018150	Ercc6l2	100	87.019	ENSPTIG00000009148	ERCC6L2	98	87.019	Panthera_tigris_altaica
ENSJJAG00000018150	Ercc6l2	100	88.588	ENSPTRG00000048689	ERCC6L2	98	88.588	Pan_troglodytes
ENSJJAG00000018150	Ercc6l2	98	79.155	ENSPSIG00000010627	ERCC6L2	100	79.155	Pelodiscus_sinensis
ENSJJAG00000018150	Ercc6l2	98	88.743	ENSPEMG00000006631	-	66	89.837	Peromyscus_maniculatus_bairdii
ENSJJAG00000018150	Ercc6l2	97	81.579	ENSPCIG00000020095	-	58	81.579	Phascolarctos_cinereus
ENSJJAG00000018150	Ercc6l2	100	85.877	ENSPCOG00000026714	ERCC6L2	98	85.877	Propithecus_coquereli
ENSJJAG00000018150	Ercc6l2	100	79.315	ENSPVAG00000003926	ERCC6L2	98	79.315	Pteropus_vampyrus
ENSJJAG00000018150	Ercc6l2	95	62.038	ENSPNYG00000015347	ercc6l2	63	62.038	Pundamilia_nyererei
ENSJJAG00000018150	Ercc6l2	100	85.307	ENSRBIG00000018434	ERCC6L2	98	85.307	Rhinopithecus_bieti
ENSJJAG00000018150	Ercc6l2	100	88.730	ENSRROG00000029000	ERCC6L2	98	88.730	Rhinopithecus_roxellana
ENSJJAG00000018150	Ercc6l2	83	79.328	ENSSHAG00000000781	-	100	79.328	Sarcophilus_harrisii
ENSJJAG00000018150	Ercc6l2	98	62.178	ENSSLDG00000018663	ercc6l2	61	62.777	Seriola_lalandi_dorsalis
ENSJJAG00000018150	Ercc6l2	99	75.783	ENSSPUG00000004336	ERCC6L2	54	75.112	Sphenodon_punctatus
ENSJJAG00000018150	Ercc6l2	98	60.258	ENSSPAG00000004484	ercc6l2	60	60.402	Stegastes_partitus
ENSJJAG00000018150	Ercc6l2	98	76.350	ENSTGUG00000000524	ERCC6L2	100	76.350	Taeniopygia_guttata
ENSJJAG00000018150	Ercc6l2	99	60.313	ENSTRUG00000014634	ercc6l2	66	60.313	Takifugu_rubripes
ENSJJAG00000018150	Ercc6l2	83	87.306	ENSTBEG00000014213	ERCC6L2	87	94.231	Tupaia_belangeri
ENSJJAG00000018150	Ercc6l2	100	81.598	ENSTTRG00000005372	ERCC6L2	98	81.598	Tursiops_truncatus
ENSJJAG00000018150	Ercc6l2	92	88.318	ENSVPAG00000004701	ERCC6L2	99	88.133	Vicugna_pacos
ENSJJAG00000018150	Ercc6l2	97	70.441	ENSXETG00000014835	ercc6l2	63	70.441	Xenopus_tropicalis