EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000018219 (Gene tree)
Gene ID: 101593553
Gene Symbol: -
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 22463 bases
Position: chrJH725539.1:1729190-1751652
Accession: 101593553
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000016371	RRM_1	PF00076.22	8.2e-28	1	2
ENSJJAP00000016371	RRM_1	PF00076.22	8.2e-28	2	2
ENSJJAP00000016367	RRM_1	PF00076.22	1.9e-27	1	2
ENSJJAP00000016367	RRM_1	PF00076.22	1.9e-27	2	2
ENSJJAP00000016359	RRM_1	PF00076.22	2e-27	1	2
ENSJJAP00000016359	RRM_1	PF00076.22	2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000022877	-	2211	-	ENSJJAP00000016367	736 (aa)	-	-
ENSJJAT00000022881	-	1794	-	ENSJJAP00000016371	597 (aa)	-	-
ENSJJAT00000022868	-	2332	XM_004667448	ENSJJAP00000016359	744 (aa)	XP_004667505	-

Gene Model

Click here to download ENSJJAG00000018219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000018219	-	59	55.714	ENSJJAG00000000374	Raver2	86	43.772

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018219	-	100	90.201	ENSG00000161847	RAVER1	100	90.201	Homo_sapiens
ENSJJAG00000018219	-	71	64.455	ENSAPOG00000017267	raver1	51	65.291	Acanthochromis_polyacanthus
ENSJJAG00000018219	-	100	89.382	ENSAMEG00000011738	RAVER1	98	89.516	Ailuropoda_melanoleuca
ENSJJAG00000018219	-	78	58.250	ENSAOCG00000005128	raver1	90	50.205	Amphiprion_ocellaris
ENSJJAG00000018219	-	75	77.193	ENSAPEG00000010854	raver1	83	77.193	Amphiprion_percula
ENSJJAG00000018219	-	100	50.854	ENSATEG00000021004	raver1	94	50.065	Anabas_testudineus
ENSJJAG00000018219	-	84	60.433	ENSACAG00000008386	-	94	58.321	Anolis_carolinensis
ENSJJAG00000018219	-	100	88.993	ENSANAG00000028226	RAVER1	98	90.201	Aotus_nancymaae
ENSJJAG00000018219	-	72	87.500	ENSACLG00000018492	raver1	91	50.811	Astatotilapia_calliptera
ENSJJAG00000018219	-	79	80.000	ENSAMXG00000005132	raver1	87	75.000	Astyanax_mexicanus
ENSJJAG00000018219	-	100	88.306	ENSBTAG00000015721	RAVER1	97	94.615	Bos_taurus
ENSJJAG00000018219	-	100	89.128	ENSCJAG00000005671	RAVER1	98	90.336	Callithrix_jacchus
ENSJJAG00000018219	-	100	88.575	ENSCAFG00000017861	RAVER1	98	88.575	Canis_familiaris
ENSJJAG00000018219	-	100	88.575	ENSCAFG00020024449	RAVER1	100	88.575	Canis_lupus_dingo
ENSJJAG00000018219	-	100	87.769	ENSCHIG00000006718	RAVER1	100	88.441	Capra_hircus
ENSJJAG00000018219	-	91	84.706	ENSTSYG00000027107	RAVER1	100	84.706	Carlito_syrichta
ENSJJAG00000018219	-	90	86.736	ENSCAPG00000002269	RAVER1	100	87.779	Cavia_aperea
ENSJJAG00000018219	-	100	88.306	ENSCPOG00000001008	RAVER1	100	89.382	Cavia_porcellus
ENSJJAG00000018219	-	100	89.396	ENSCCAG00000031723	RAVER1	98	90.201	Cebus_capucinus
ENSJJAG00000018219	-	100	90.738	ENSCATG00000043863	RAVER1	98	90.738	Cercocebus_atys
ENSJJAG00000018219	-	100	90.054	ENSCLAG00000009336	RAVER1	100	90.457	Chinchilla_lanigera
ENSJJAG00000018219	-	100	90.872	ENSCSAG00000007317	RAVER1	84	90.872	Chlorocebus_sabaeus
ENSJJAG00000018219	-	93	73.348	ENSCPBG00000005349	-	96	62.211	Chrysemys_picta_bellii
ENSJJAG00000018219	-	100	90.872	ENSCANG00000008337	RAVER1	98	90.872	Colobus_angolensis_palliatus
ENSJJAG00000018219	-	100	91.141	ENSCGRG00001013260	-	100	91.275	Cricetulus_griseus_chok1gshd
ENSJJAG00000018219	-	100	91.141	ENSCGRG00000015138	-	100	91.275	Cricetulus_griseus_crigri
ENSJJAG00000018219	-	72	80.769	ENSCSEG00000021092	raver1	76	80.769	Cynoglossus_semilaevis
ENSJJAG00000018219	-	100	50.067	ENSCVAG00000013971	raver1	86	58.182	Cyprinodon_variegatus
ENSJJAG00000018219	-	76	60.793	ENSDARG00000052617	raver1	93	51.018	Danio_rerio
ENSJJAG00000018219	-	76	91.892	ENSDNOG00000035742	-	74	91.892	Dasypus_novemcinctus
ENSJJAG00000018219	-	100	82.523	ENSDORG00000010106	-	100	82.260	Dipodomys_ordii
ENSJJAG00000018219	-	91	64.674	ENSETEG00000008201	-	87	87.310	Echinops_telfairi
ENSJJAG00000018219	-	100	75.788	ENSEASG00005010544	-	89	93.112	Equus_asinus_asinus
ENSJJAG00000018219	-	100	90.995	ENSECAG00000024966	RAVER1	98	91.801	Equus_caballus
ENSJJAG00000018219	-	98	52.853	ENSELUG00000023287	raver1	93	52.233	Esox_lucius
ENSJJAG00000018219	-	100	90.726	ENSFCAG00000009435	RAVER1	98	90.860	Felis_catus
ENSJJAG00000018219	-	100	89.113	ENSFDAG00000015113	RAVER1	100	89.651	Fukomys_damarensis
ENSJJAG00000018219	-	80	59.449	ENSGMOG00000003649	raver1	83	59.208	Gadus_morhua
ENSJJAG00000018219	-	67	47.044	ENSGALG00000050608	-	53	44.834	Gallus_gallus
ENSJJAG00000018219	-	100	50.983	ENSGAFG00000015944	raver1	56	65.485	Gambusia_affinis
ENSJJAG00000018219	-	100	49.737	ENSGACG00000013818	raver1	100	49.539	Gasterosteus_aculeatus
ENSJJAG00000018219	-	96	63.867	ENSGAGG00000011748	-	96	78.022	Gopherus_agassizii
ENSJJAG00000018219	-	100	90.201	ENSGGOG00000006015	RAVER1	98	90.201	Gorilla_gorilla
ENSJJAG00000018219	-	72	84.314	ENSHBUG00000021210	raver1	91	49.523	Haplochromis_burtoni
ENSJJAG00000018219	-	100	89.113	ENSHGLG00000015460	RAVER1	100	89.651	Heterocephalus_glaber_female
ENSJJAG00000018219	-	100	89.113	ENSHGLG00100000812	RAVER1	100	89.651	Heterocephalus_glaber_male
ENSJJAG00000018219	-	98	50.270	ENSHCOG00000000449	raver1	91	51.015	Hippocampus_comes
ENSJJAG00000018219	-	98	51.096	ENSIPUG00000013153	raver1	83	58.846	Ictalurus_punctatus
ENSJJAG00000018219	-	100	90.995	ENSSTOG00000003241	RAVER1	100	91.801	Ictidomys_tridecemlineatus
ENSJJAG00000018219	-	96	51.084	ENSKMAG00000017355	raver1	91	49.933	Kryptolebias_marmoratus
ENSJJAG00000018219	-	89	49.477	ENSLBEG00000008268	raver1	70	57.843	Labrus_bergylta
ENSJJAG00000018219	-	90	60.770	ENSLACG00000005809	-	99	61.254	Latimeria_chalumnae
ENSJJAG00000018219	-	96	55.839	ENSLOCG00000007500	raver1	92	55.705	Lepisosteus_oculatus
ENSJJAG00000018219	-	100	90.591	ENSLAFG00000003664	-	100	90.591	Loxodonta_africana
ENSJJAG00000018219	-	100	90.336	ENSMFAG00000037977	RAVER1	98	90.336	Macaca_fascicularis
ENSJJAG00000018219	-	100	90.604	ENSMMUG00000014897	RAVER1	98	90.604	Macaca_mulatta
ENSJJAG00000018219	-	100	90.604	ENSMNEG00000028390	RAVER1	98	90.604	Macaca_nemestrina
ENSJJAG00000018219	-	100	90.738	ENSMLEG00000041959	RAVER1	98	90.738	Mandrillus_leucophaeus
ENSJJAG00000018219	-	74	79.245	ENSMAMG00000012059	raver1	93	50.536	Mastacembelus_armatus
ENSJJAG00000018219	-	72	87.500	ENSMZEG00005019002	raver1	91	51.078	Maylandia_zebra
ENSJJAG00000018219	-	100	90.738	ENSMAUG00000017948	-	100	90.872	Mesocricetus_auratus
ENSJJAG00000018219	-	99	88.694	ENSMICG00000010326	RAVER1	99	88.694	Microcebus_murinus
ENSJJAG00000018219	-	100	91.812	ENSMOCG00000015553	-	100	91.946	Microtus_ochrogaster
ENSJJAG00000018219	-	99	51.009	ENSMMOG00000012093	raver1	94	50.601	Mola_mola
ENSJJAG00000018219	-	97	75.034	ENSMODG00000005584	-	89	74.897	Monodelphis_domestica
ENSJJAG00000018219	-	96	50.972	ENSMALG00000016569	raver1	91	50.000	Monopterus_albus
ENSJJAG00000018219	-	100	89.987	MGP_CAROLIEiJ_G0031860	-	100	90.120	Mus_caroli
ENSJJAG00000018219	-	100	90.254	ENSMUSG00000010205	Raver1	100	90.387	Mus_musculus
ENSJJAG00000018219	-	100	88.845	MGP_PahariEiJ_G0014726	-	100	89.774	Mus_pahari
ENSJJAG00000018219	-	100	90.120	MGP_SPRETEiJ_G0032984	-	100	90.254	Mus_spretus
ENSJJAG00000018219	-	100	91.129	ENSMPUG00000006712	RAVER1	98	91.263	Mustela_putorius_furo
ENSJJAG00000018219	-	100	88.710	ENSMLUG00000012328	RAVER1	100	88.710	Myotis_lucifugus
ENSJJAG00000018219	-	100	89.396	ENSNGAG00000001260	-	100	89.664	Nannospalax_galili
ENSJJAG00000018219	-	77	63.750	ENSNBRG00000010139	raver1	91	45.957	Neolamprologus_brichardi
ENSJJAG00000018219	-	100	90.336	ENSNLEG00000012181	RAVER1	98	90.336	Nomascus_leucogenys
ENSJJAG00000018219	-	90	74.184	ENSMEUG00000003281	-	100	74.184	Notamacropus_eugenii
ENSJJAG00000018219	-	51	85.938	ENSOPRG00000005855	-	51	86.719	Ochotona_princeps
ENSJJAG00000018219	-	100	89.382	ENSODEG00000016260	RAVER1	100	89.785	Octodon_degus
ENSJJAG00000018219	-	96	51.801	ENSONIG00000001559	raver1	99	51.507	Oreochromis_niloticus
ENSJJAG00000018219	-	100	83.468	ENSOCUG00000020918	RAVER1	100	82.392	Oryctolagus_cuniculus
ENSJJAG00000018219	-	68	66.176	ENSORLG00000005458	raver1	68	66.015	Oryzias_latipes
ENSJJAG00000018219	-	98	50.204	ENSORLG00020004392	raver1	68	66.259	Oryzias_latipes_hni
ENSJJAG00000018219	-	68	66.176	ENSORLG00015017222	raver1	68	66.015	Oryzias_latipes_hsok
ENSJJAG00000018219	-	60	83.673	ENSOMEG00000023956	raver1	67	83.673	Oryzias_melastigma
ENSJJAG00000018219	-	100	90.323	ENSOGAG00000011071	RAVER1	98	90.323	Otolemur_garnettii
ENSJJAG00000018219	-	100	85.887	ENSOARG00000015886	RAVER1	98	86.962	Ovis_aries
ENSJJAG00000018219	-	100	90.201	ENSPPAG00000002611	RAVER1	98	90.201	Pan_paniscus
ENSJJAG00000018219	-	100	91.129	ENSPPRG00000009912	RAVER1	98	91.263	Panthera_pardus
ENSJJAG00000018219	-	100	90.201	ENSPTRG00000010466	RAVER1	98	90.201	Pan_troglodytes
ENSJJAG00000018219	-	100	90.604	ENSPANG00000004122	RAVER1	98	90.604	Papio_anubis
ENSJJAG00000018219	-	100	91.421	ENSPEMG00000016411	-	100	91.957	Peromyscus_maniculatus_bairdii
ENSJJAG00000018219	-	100	76.800	ENSPCIG00000018695	-	100	75.931	Phascolarctos_cinereus
ENSJJAG00000018219	-	75	61.707	ENSPFOG00000007016	raver1	57	63.908	Poecilia_formosa
ENSJJAG00000018219	-	75	64.270	ENSPLAG00000020793	raver1	82	55.932	Poecilia_latipinna
ENSJJAG00000018219	-	100	51.262	ENSPMEG00000011220	raver1	94	50.197	Poecilia_mexicana
ENSJJAG00000018219	-	74	90.698	ENSPREG00000006864	raver1	79	90.698	Poecilia_reticulata
ENSJJAG00000018219	-	100	88.172	ENSPPYG00000010514	RAVER1	84	89.933	Pongo_abelii
ENSJJAG00000018219	-	100	90.872	ENSPCOG00000026605	RAVER1	98	91.007	Propithecus_coquereli
ENSJJAG00000018219	-	100	90.054	ENSPVAG00000003689	RAVER1	100	90.726	Pteropus_vampyrus
ENSJJAG00000018219	-	66	84.314	ENSPNYG00000013284	raver1	65	84.314	Pundamilia_nyererei
ENSJJAG00000018219	-	98	50.868	ENSPNAG00000015476	raver1	94	51.117	Pygocentrus_nattereri
ENSJJAG00000018219	-	100	90.120	ENSRNOG00000020710	Raver1	100	90.654	Rattus_norvegicus
ENSJJAG00000018219	-	100	90.336	ENSRBIG00000034702	RAVER1	98	90.738	Rhinopithecus_bieti
ENSJJAG00000018219	-	100	88.054	ENSRROG00000031186	RAVER1	98	88.188	Rhinopithecus_roxellana
ENSJJAG00000018219	-	100	87.114	ENSSBOG00000023423	RAVER1	98	87.651	Saimiri_boliviensis_boliviensis
ENSJJAG00000018219	-	90	75.811	ENSSHAG00000008181	-	90	75.811	Sarcophilus_harrisii
ENSJJAG00000018219	-	66	66.582	ENSSMAG00000004546	raver1	91	49.461	Scophthalmus_maximus
ENSJJAG00000018219	-	98	50.000	ENSSDUG00000021063	raver1	91	51.220	Seriola_dumerili
ENSJJAG00000018219	-	98	49.863	ENSSLDG00000014505	raver1	91	51.084	Seriola_lalandi_dorsalis
ENSJJAG00000018219	-	68	66.502	ENSSPAG00000000688	raver1	93	51.827	Stegastes_partitus
ENSJJAG00000018219	-	100	90.995	ENSSSCG00000013650	-	98	91.667	Sus_scrofa
ENSJJAG00000018219	-	99	50.598	ENSTRUG00000025641	raver1	94	49.867	Takifugu_rubripes
ENSJJAG00000018219	-	100	89.516	ENSTTRG00000009552	RAVER1	100	90.188	Tursiops_truncatus
ENSJJAG00000018219	-	100	91.398	ENSUAMG00000020385	RAVER1	98	91.532	Ursus_americanus
ENSJJAG00000018219	-	100	88.575	ENSVVUG00000028976	RAVER1	98	88.575	Vulpes_vulpes
ENSJJAG00000018219	-	100	55.218	ENSXETG00000011622	raver1	100	54.690	Xenopus_tropicalis
ENSJJAG00000018219	-	99	50.601	ENSXCOG00000016368	raver1	70	62.615	Xiphophorus_couchianus
ENSJJAG00000018219	-	99	50.601	ENSXMAG00000000217	raver1	94	50.066	Xiphophorus_maculatus