EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000018673 (Gene tree)
Gene ID: 101616546
Gene Symbol: Rpusd4
Alias: 2410001E19Rik
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 9422 bases
Position: chrJH725516.1:576892-586313
Accession: 101616546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000016983	PseudoU_synth_2	PF00849.22	5.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000023499	-	1110	XM_004665453	ENSJJAP00000016983	369 (aa)	XP_004665510	UPI0003330B70

Gene Model

Click here to download ENSJJAG00000018673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000018673	Rpusd4	73	30.314	ENSJJAG00000012679	Rpusd3	80	30.208

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018673	Rpusd4	100	82.258	ENSG00000165526	RPUSD4	99	82.258	Homo_sapiens
ENSJJAG00000018673	Rpusd4	91	52.312	ENSAPOG00000011024	rpusd4	85	52.312	Acanthochromis_polyacanthus
ENSJJAG00000018673	Rpusd4	99	83.019	ENSAMEG00000000127	-	98	83.019	Ailuropoda_melanoleuca
ENSJJAG00000018673	Rpusd4	83	70.175	ENSAMEG00000005953	-	97	70.175	Ailuropoda_melanoleuca
ENSJJAG00000018673	Rpusd4	86	50.155	ENSACIG00000003533	rpusd4	95	50.155	Amphilophus_citrinellus
ENSJJAG00000018673	Rpusd4	88	52.711	ENSAOCG00000015409	rpusd4	82	52.711	Amphiprion_ocellaris
ENSJJAG00000018673	Rpusd4	88	53.012	ENSAPEG00000018935	rpusd4	82	53.012	Amphiprion_percula
ENSJJAG00000018673	Rpusd4	86	53.251	ENSATEG00000008059	rpusd4	80	53.251	Anabas_testudineus
ENSJJAG00000018673	Rpusd4	75	59.498	ENSAPLG00000013250	RPUSD4	99	58.305	Anas_platyrhynchos
ENSJJAG00000018673	Rpusd4	88	64.048	ENSACAG00000000189	RPUSD4	90	64.242	Anolis_carolinensis
ENSJJAG00000018673	Rpusd4	100	81.989	ENSANAG00000024050	RPUSD4	100	81.989	Aotus_nancymaae
ENSJJAG00000018673	Rpusd4	98	49.051	ENSACLG00000020996	rpusd4	94	49.051	Astatotilapia_calliptera
ENSJJAG00000018673	Rpusd4	89	51.343	ENSAMXG00000031479	rpusd4	94	51.343	Astyanax_mexicanus
ENSJJAG00000018673	Rpusd4	99	78.610	ENSBTAG00000020900	RPUSD4	98	78.610	Bos_taurus
ENSJJAG00000018673	Rpusd4	99	81.892	ENSCJAG00000042850	RPUSD4	93	81.892	Callithrix_jacchus
ENSJJAG00000018673	Rpusd4	99	82.574	ENSCAFG00000010488	RPUSD4	98	82.842	Canis_familiaris
ENSJJAG00000018673	Rpusd4	99	82.574	ENSCAFG00020010621	RPUSD4	98	82.842	Canis_lupus_dingo
ENSJJAG00000018673	Rpusd4	99	79.357	ENSCHIG00000009975	RPUSD4	98	79.357	Capra_hircus
ENSJJAG00000018673	Rpusd4	99	85.598	ENSTSYG00000008456	RPUSD4	98	85.598	Carlito_syrichta
ENSJJAG00000018673	Rpusd4	69	81.818	ENSCAPG00000006040	RPUSD4	98	81.818	Cavia_aperea
ENSJJAG00000018673	Rpusd4	100	82.432	ENSCPOG00000014971	RPUSD4	99	82.432	Cavia_porcellus
ENSJJAG00000018673	Rpusd4	100	82.258	ENSCCAG00000027838	RPUSD4	100	82.258	Cebus_capucinus
ENSJJAG00000018673	Rpusd4	100	82.258	ENSCATG00000041570	RPUSD4	99	82.258	Cercocebus_atys
ENSJJAG00000018673	Rpusd4	100	84.140	ENSCLAG00000016553	RPUSD4	99	84.140	Chinchilla_lanigera
ENSJJAG00000018673	Rpusd4	100	82.258	ENSCSAG00000002274	RPUSD4	99	82.258	Chlorocebus_sabaeus
ENSJJAG00000018673	Rpusd4	75	85.199	ENSCHOG00000010249	RPUSD4	98	85.199	Choloepus_hoffmanni
ENSJJAG00000018673	Rpusd4	77	67.133	ENSCPBG00000011175	RPUSD4	99	67.133	Chrysemys_picta_bellii
ENSJJAG00000018673	Rpusd4	85	39.264	ENSCSAVG00000000872	-	63	39.264	Ciona_savignyi
ENSJJAG00000018673	Rpusd4	100	81.720	ENSCANG00000039684	RPUSD4	99	81.720	Colobus_angolensis_palliatus
ENSJJAG00000018673	Rpusd4	100	87.366	ENSCGRG00001024141	Rpusd4	99	87.366	Cricetulus_griseus_chok1gshd
ENSJJAG00000018673	Rpusd4	100	87.366	ENSCGRG00000014415	Rpusd4	99	87.366	Cricetulus_griseus_crigri
ENSJJAG00000018673	Rpusd4	89	50.301	ENSCVAG00000000392	rpusd4	93	50.301	Cyprinodon_variegatus
ENSJJAG00000018673	Rpusd4	89	50.000	ENSCVAG00000008761	rpusd4	84	50.000	Cyprinodon_variegatus
ENSJJAG00000018673	Rpusd4	82	52.787	ENSDARG00000012674	rpusd4	90	51.840	Danio_rerio
ENSJJAG00000018673	Rpusd4	99	79.032	ENSDNOG00000020026	RPUSD4	98	79.032	Dasypus_novemcinctus
ENSJJAG00000018673	Rpusd4	99	82.210	ENSDORG00000016717	Rpusd4	98	82.210	Dipodomys_ordii
ENSJJAG00000018673	Rpusd4	99	81.522	ENSETEG00000013953	RPUSD4	98	81.522	Echinops_telfairi
ENSJJAG00000018673	Rpusd4	99	84.906	ENSEASG00005022982	RPUSD4	98	84.906	Equus_asinus_asinus
ENSJJAG00000018673	Rpusd4	99	84.367	ENSECAG00000000557	RPUSD4	98	84.367	Equus_caballus
ENSJJAG00000018673	Rpusd4	81	82.609	ENSEEUG00000014036	RPUSD4	80	82.609	Erinaceus_europaeus
ENSJJAG00000018673	Rpusd4	89	55.891	ENSELUG00000008075	rpusd4	86	55.891	Esox_lucius
ENSJJAG00000018673	Rpusd4	99	80.863	ENSFCAG00000029789	RPUSD4	98	81.132	Felis_catus
ENSJJAG00000018673	Rpusd4	89	57.485	ENSFALG00000005171	RPUSD4	98	57.485	Ficedula_albicollis
ENSJJAG00000018673	Rpusd4	94	85.470	ENSFDAG00000014307	RPUSD4	94	85.470	Fukomys_damarensis
ENSJJAG00000018673	Rpusd4	96	47.884	ENSFHEG00000004329	rpusd4	97	47.884	Fundulus_heteroclitus
ENSJJAG00000018673	Rpusd4	87	51.235	ENSGMOG00000017726	rpusd4	96	51.235	Gadus_morhua
ENSJJAG00000018673	Rpusd4	88	56.548	ENSGALG00000024326	RPUSD4	94	57.059	Gallus_gallus
ENSJJAG00000018673	Rpusd4	94	47.025	ENSGAFG00000021559	rpusd4	88	47.025	Gambusia_affinis
ENSJJAG00000018673	Rpusd4	90	50.147	ENSGACG00000001657	rpusd4	100	50.147	Gasterosteus_aculeatus
ENSJJAG00000018673	Rpusd4	90	62.275	ENSGAGG00000000132	RPUSD4	93	62.275	Gopherus_agassizii
ENSJJAG00000018673	Rpusd4	100	81.989	ENSGGOG00000016494	RPUSD4	99	81.989	Gorilla_gorilla
ENSJJAG00000018673	Rpusd4	87	52.294	ENSHBUG00000022838	rpusd4	84	52.294	Haplochromis_burtoni
ENSJJAG00000018673	Rpusd4	100	84.677	ENSHGLG00000002285	RPUSD4	99	84.677	Heterocephalus_glaber_female
ENSJJAG00000018673	Rpusd4	100	84.677	ENSHGLG00100006385	RPUSD4	99	84.677	Heterocephalus_glaber_male
ENSJJAG00000018673	Rpusd4	89	52.695	ENSHCOG00000006612	rpusd4	84	52.695	Hippocampus_comes
ENSJJAG00000018673	Rpusd4	92	51.567	ENSIPUG00000023879	rusd4	91	51.567	Ictalurus_punctatus
ENSJJAG00000018673	Rpusd4	97	84.211	ENSSTOG00000025280	RPUSD4	99	84.211	Ictidomys_tridecemlineatus
ENSJJAG00000018673	Rpusd4	91	53.061	ENSKMAG00000021805	rpusd4	88	53.061	Kryptolebias_marmoratus
ENSJJAG00000018673	Rpusd4	87	52.905	ENSLBEG00000020394	rpusd4	91	52.905	Labrus_bergylta
ENSJJAG00000018673	Rpusd4	87	61.801	ENSLACG00000011028	RPUSD4	85	60.597	Latimeria_chalumnae
ENSJJAG00000018673	Rpusd4	95	45.856	ENSLOCG00000003124	rpusd4	97	45.856	Lepisosteus_oculatus
ENSJJAG00000018673	Rpusd4	99	83.243	ENSLAFG00000005211	RPUSD4	98	83.243	Loxodonta_africana
ENSJJAG00000018673	Rpusd4	100	82.258	ENSMFAG00000039513	RPUSD4	99	82.258	Macaca_fascicularis
ENSJJAG00000018673	Rpusd4	100	81.989	ENSMMUG00000007933	RPUSD4	99	81.989	Macaca_mulatta
ENSJJAG00000018673	Rpusd4	100	81.989	ENSMNEG00000027414	RPUSD4	99	81.989	Macaca_nemestrina
ENSJJAG00000018673	Rpusd4	100	81.720	ENSMLEG00000042461	RPUSD4	99	81.720	Mandrillus_leucophaeus
ENSJJAG00000018673	Rpusd4	89	50.000	ENSMAMG00000023839	rpusd4	86	50.000	Mastacembelus_armatus
ENSJJAG00000018673	Rpusd4	98	49.051	ENSMZEG00005011999	rpusd4	94	49.051	Maylandia_zebra
ENSJJAG00000018673	Rpusd4	75	60.573	ENSMGAG00000000840	RPUSD4	99	57.895	Meleagris_gallopavo
ENSJJAG00000018673	Rpusd4	100	84.409	ENSMAUG00000010280	Rpusd4	99	84.409	Mesocricetus_auratus
ENSJJAG00000018673	Rpusd4	100	82.258	ENSMICG00000015979	RPUSD4	99	82.258	Microcebus_murinus
ENSJJAG00000018673	Rpusd4	100	82.258	ENSMOCG00000000661	Rpusd4	99	82.258	Microtus_ochrogaster
ENSJJAG00000018673	Rpusd4	80	54.967	ENSMMOG00000021731	rpusd4	89	54.967	Mola_mola
ENSJJAG00000018673	Rpusd4	88	74.847	ENSMODG00000004521	RPUSD4	84	74.847	Monodelphis_domestica
ENSJJAG00000018673	Rpusd4	82	52.922	ENSMALG00000005839	rpusd4	93	52.922	Monopterus_albus
ENSJJAG00000018673	Rpusd4	100	83.065	MGP_CAROLIEiJ_G0031954	Rpusd4	99	83.065	Mus_caroli
ENSJJAG00000018673	Rpusd4	100	83.065	ENSMUSG00000032044	Rpusd4	99	83.065	Mus_musculus
ENSJJAG00000018673	Rpusd4	100	84.409	MGP_PahariEiJ_G0014819	Rpusd4	99	84.409	Mus_pahari
ENSJJAG00000018673	Rpusd4	100	83.333	MGP_SPRETEiJ_G0033078	Rpusd4	99	83.333	Mus_spretus
ENSJJAG00000018673	Rpusd4	99	81.132	ENSMPUG00000006608	RPUSD4	99	81.132	Mustela_putorius_furo
ENSJJAG00000018673	Rpusd4	68	85.714	ENSMLUG00000029348	-	99	85.714	Myotis_lucifugus
ENSJJAG00000018673	Rpusd4	90	85.672	ENSMLUG00000017328	-	96	82.645	Myotis_lucifugus
ENSJJAG00000018673	Rpusd4	100	85.484	ENSNGAG00000020847	Rpusd4	99	85.484	Nannospalax_galili
ENSJJAG00000018673	Rpusd4	87	52.599	ENSNBRG00000005207	rpusd4	95	52.599	Neolamprologus_brichardi
ENSJJAG00000018673	Rpusd4	100	82.527	ENSNLEG00000007465	RPUSD4	99	82.527	Nomascus_leucogenys
ENSJJAG00000018673	Rpusd4	99	69.459	ENSMEUG00000004370	RPUSD4	99	69.459	Notamacropus_eugenii
ENSJJAG00000018673	Rpusd4	50	86.986	ENSOPRG00000013141	-	71	86.986	Ochotona_princeps
ENSJJAG00000018673	Rpusd4	100	81.989	ENSODEG00000004577	RPUSD4	99	81.989	Octodon_degus
ENSJJAG00000018673	Rpusd4	95	50.838	ENSONIG00000018879	rpusd4	96	50.838	Oreochromis_niloticus
ENSJJAG00000018673	Rpusd4	79	69.153	ENSOANG00000007247	RPUSD4	96	68.543	Ornithorhynchus_anatinus
ENSJJAG00000018673	Rpusd4	99	83.424	ENSOCUG00000017039	RPUSD4	98	83.152	Oryctolagus_cuniculus
ENSJJAG00000018673	Rpusd4	93	49.296	ENSORLG00000002750	rpusd4	97	49.296	Oryzias_latipes
ENSJJAG00000018673	Rpusd4	86	52.012	ENSORLG00020002044	rpusd4	80	52.012	Oryzias_latipes_hni
ENSJJAG00000018673	Rpusd4	86	52.012	ENSORLG00015020034	rpusd4	80	52.012	Oryzias_latipes_hsok
ENSJJAG00000018673	Rpusd4	89	51.613	ENSOMEG00000004861	rpusd4	84	51.613	Oryzias_melastigma
ENSJJAG00000018673	Rpusd4	100	81.769	ENSOGAG00000008922	RPUSD4	99	81.769	Otolemur_garnettii
ENSJJAG00000018673	Rpusd4	99	79.076	ENSOARG00000012238	RPUSD4	95	79.076	Ovis_aries
ENSJJAG00000018673	Rpusd4	100	82.527	ENSPPAG00000042883	RPUSD4	92	82.527	Pan_paniscus
ENSJJAG00000018673	Rpusd4	99	81.132	ENSPPRG00000003081	RPUSD4	98	81.132	Panthera_pardus
ENSJJAG00000018673	Rpusd4	99	81.132	ENSPTIG00000012059	RPUSD4	98	81.132	Panthera_tigris_altaica
ENSJJAG00000018673	Rpusd4	95	85.795	ENSPTRG00000004454	RPUSD4	93	85.795	Pan_troglodytes
ENSJJAG00000018673	Rpusd4	100	82.258	ENSPANG00000015040	RPUSD4	99	82.258	Papio_anubis
ENSJJAG00000018673	Rpusd4	90	59.581	ENSPKIG00000023986	rpusd4	86	59.581	Paramormyrops_kingsleyae
ENSJJAG00000018673	Rpusd4	81	66.000	ENSPSIG00000014268	RPUSD4	95	66.000	Pelodiscus_sinensis
ENSJJAG00000018673	Rpusd4	86	51.242	ENSPMGG00000002806	rpusd4	89	51.090	Periophthalmus_magnuspinnatus
ENSJJAG00000018673	Rpusd4	100	77.419	ENSPEMG00000000278	Rpusd4	99	77.419	Peromyscus_maniculatus_bairdii
ENSJJAG00000018673	Rpusd4	81	46.687	ENSPMAG00000008183	rpusd4	96	46.687	Petromyzon_marinus
ENSJJAG00000018673	Rpusd4	91	75.298	ENSPCIG00000010212	RPUSD4	92	75.298	Phascolarctos_cinereus
ENSJJAG00000018673	Rpusd4	94	49.014	ENSPFOG00000019030	rpusd4	91	49.014	Poecilia_formosa
ENSJJAG00000018673	Rpusd4	94	49.575	ENSPLAG00000016848	rpusd4	88	49.575	Poecilia_latipinna
ENSJJAG00000018673	Rpusd4	94	48.159	ENSPMEG00000017534	rpusd4	88	48.159	Poecilia_mexicana
ENSJJAG00000018673	Rpusd4	91	48.596	ENSPREG00000005689	rpusd4	90	48.596	Poecilia_reticulata
ENSJJAG00000018673	Rpusd4	100	82.796	ENSPPYG00000004043	RPUSD4	99	82.796	Pongo_abelii
ENSJJAG00000018673	Rpusd4	81	80.435	ENSPCAG00000000753	RPUSD4	81	80.435	Procavia_capensis
ENSJJAG00000018673	Rpusd4	99	75.806	ENSPCOG00000020694	RPUSD4	100	75.806	Propithecus_coquereli
ENSJJAG00000018673	Rpusd4	98	84.699	ENSPVAG00000000988	RPUSD4	98	84.699	Pteropus_vampyrus
ENSJJAG00000018673	Rpusd4	87	51.376	ENSPNYG00000009652	rpusd4	84	51.376	Pundamilia_nyererei
ENSJJAG00000018673	Rpusd4	92	52.786	ENSPNAG00000012264	rpusd4	90	52.786	Pygocentrus_nattereri
ENSJJAG00000018673	Rpusd4	100	83.871	ENSRNOG00000011567	Rpusd4	99	83.871	Rattus_norvegicus
ENSJJAG00000018673	Rpusd4	97	84.211	ENSRBIG00000034842	RPUSD4	99	82.527	Rhinopithecus_bieti
ENSJJAG00000018673	Rpusd4	97	84.211	ENSRROG00000039753	RPUSD4	99	82.527	Rhinopithecus_roxellana
ENSJJAG00000018673	Rpusd4	100	80.914	ENSSBOG00000030413	RPUSD4	100	80.914	Saimiri_boliviensis_boliviensis
ENSJJAG00000018673	Rpusd4	81	76.589	ENSSHAG00000008304	RPUSD4	99	76.589	Sarcophilus_harrisii
ENSJJAG00000018673	Rpusd4	89	57.738	ENSSFOG00015006203	rpusd4	92	57.310	Scleropages_formosus
ENSJJAG00000018673	Rpusd4	94	50.142	ENSSMAG00000020978	rpusd4	91	50.142	Scophthalmus_maximus
ENSJJAG00000018673	Rpusd4	85	50.943	ENSSDUG00000013399	rpusd4	84	50.943	Seriola_dumerili
ENSJJAG00000018673	Rpusd4	85	50.943	ENSSLDG00000023507	rpusd4	84	50.943	Seriola_lalandi_dorsalis
ENSJJAG00000018673	Rpusd4	94	61.190	ENSSPUG00000001401	RPUSD4	95	61.690	Sphenodon_punctatus
ENSJJAG00000018673	Rpusd4	90	53.959	ENSSPAG00000012163	rpusd4	87	53.959	Stegastes_partitus
ENSJJAG00000018673	Rpusd4	99	84.054	ENSSSCG00000015233	RPUSD4	98	84.054	Sus_scrofa
ENSJJAG00000018673	Rpusd4	81	59.000	ENSTGUG00000000773	RPUSD4	100	59.000	Taeniopygia_guttata
ENSJJAG00000018673	Rpusd4	86	51.543	ENSTRUG00000012283	rpusd4	83	51.543	Takifugu_rubripes
ENSJJAG00000018673	Rpusd4	91	50.437	ENSTNIG00000014676	rpusd4	87	50.437	Tetraodon_nigroviridis
ENSJJAG00000018673	Rpusd4	99	81.622	ENSTTRG00000001555	RPUSD4	98	81.622	Tursiops_truncatus
ENSJJAG00000018673	Rpusd4	50	83.333	ENSUAMG00000005503	-	97	83.333	Ursus_americanus
ENSJJAG00000018673	Rpusd4	99	82.210	ENSUMAG00000002219	RPUSD4	98	82.210	Ursus_maritimus
ENSJJAG00000018673	Rpusd4	71	84.091	ENSVPAG00000001066	RPUSD4	100	84.091	Vicugna_pacos
ENSJJAG00000018673	Rpusd4	99	82.306	ENSVVUG00000020101	RPUSD4	98	82.574	Vulpes_vulpes
ENSJJAG00000018673	Rpusd4	94	48.725	ENSXCOG00000004676	rpusd4	91	48.159	Xiphophorus_couchianus
ENSJJAG00000018673	Rpusd4	94	48.442	ENSXMAG00000023351	rpusd4	88	48.442	Xiphophorus_maculatus