EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000018723 (Gene tree)
Gene ID: 101601167
Gene Symbol: -
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 8879 bases
Position: chrJH725437.1:54819090-54827968
Accession: 101601167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000017045	RRM_1	PF00076.22	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000023562	-	336	XM_004649377	ENSJJAP00000017045	111 (aa)	XP_004649434	UPI000332F09A

Gene Model

Click here to download ENSJJAG00000018723's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018723's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000018723	-	82	30.769	ENSJJAG00000022240	Hnrnpab	62	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018723	-	100	77.477	ENSBTAG00000008135	SLIRP	89	79.798	Bos_taurus
ENSJJAG00000018723	-	92	70.588	ENSBTAG00000050457	-	97	70.707	Bos_taurus
ENSJJAG00000018723	-	100	78.378	ENSCAFG00000017230	SLIRP	89	80.808	Canis_familiaris
ENSJJAG00000018723	-	100	78.378	ENSCAFG00020000852	-	89	80.808	Canis_lupus_dingo
ENSJJAG00000018723	-	100	72.973	ENSCHIG00000002964	-	89	73.737	Capra_hircus
ENSJJAG00000018723	-	100	76.577	ENSCHIG00000019077	-	92	79.798	Capra_hircus
ENSJJAG00000018723	-	100	75.676	ENSCPOG00000001500	-	89	78.788	Cavia_porcellus
ENSJJAG00000018723	-	100	78.378	ENSCLAG00000008545	-	89	79.798	Chinchilla_lanigera
ENSJJAG00000018723	-	80	62.921	ENSDNOG00000041397	-	82	62.222	Dasypus_novemcinctus
ENSJJAG00000018723	-	100	81.982	ENSECAG00000000712	SLIRP	89	83.838	Equus_caballus
ENSJJAG00000018723	-	100	76.577	MGP_PahariEiJ_G0029754	-	89	78.788	Mus_pahari
ENSJJAG00000018723	-	100	75.676	ENSMLUG00000022403	-	89	76.768	Myotis_lucifugus
ENSJJAG00000018723	-	100	77.477	ENSOPRG00000007560	-	89	78.788	Ochotona_princeps
ENSJJAG00000018723	-	100	81.081	ENSOCUG00000009713	-	89	83.838	Oryctolagus_cuniculus
ENSJJAG00000018723	-	100	62.162	ENSOGAG00000027580	-	88	63.636	Otolemur_garnettii
ENSJJAG00000018723	-	100	77.477	ENSOARG00000002642	SLIRP	89	78.788	Ovis_aries
ENSJJAG00000018723	-	100	66.667	ENSOARG00000016139	-	86	70.833	Ovis_aries
ENSJJAG00000018723	-	85	60.638	ENSPCAG00000004290	-	89	60.606	Procavia_capensis
ENSJJAG00000018723	-	70	75.641	ENSPVAG00000006420	-	70	75.641	Pteropus_vampyrus
ENSJJAG00000018723	-	100	77.477	ENSRNOG00000012314	Slirp	89	78.788	Rattus_norvegicus
ENSJJAG00000018723	-	100	79.279	ENSTBEG00000013979	-	89	80.808	Tupaia_belangeri
ENSJJAG00000018723	-	70	80.769	ENSTTRG00000009328	-	70	80.769	Tursiops_truncatus