EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000018739 (Gene tree)
Gene ID: 101615469
Gene Symbol: Poc1a
Alias: 2510040D07Rik|Wdr51a|cha
Full Name: POC1 centriolar protein A
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 88844 bases
Position: chrJH725506.1:3537240-3626083
Accession: 101615469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000017092	eIF2A	PF08662.11	1e-11	1	1
ENSJJAP00000017085	eIF2A	PF08662.11	1e-10	1	1
ENSJJAP00000017079	eIF2A	PF08662.11	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000023602	-	1077	XM_004664312	ENSJJAP00000017085	358 (aa)	XP_004664369	-
ENSJJAT00000023609	-	1170	-	ENSJJAP00000017092	389 (aa)	-	-
ENSJJAT00000023596	-	1224	XM_004664311	ENSJJAP00000017079	407 (aa)	XP_004664368	-

Gene Model

Click here to download ENSJJAG00000018739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018739's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000018739	Poc1a	84	31.373	ENSJJAG00000014169	Apaf1	52	31.373
ENSJJAG00000018739	Poc1a	80	31.658	ENSJJAG00000019990	Wdr61	97	31.658
ENSJJAG00000018739	Poc1a	84	33.074	ENSJJAG00000000297	Wdr5b	92	33.203
ENSJJAG00000018739	Poc1a	82	30.625	ENSJJAG00000008838	Prpf4	56	30.625
ENSJJAG00000018739	Poc1a	69	34.586	ENSJJAG00000008979	-	89	34.328
ENSJJAG00000018739	Poc1a	91	34.375	ENSJJAG00000013861	Wdr3	54	35.043
ENSJJAG00000018739	Poc1a	99	65.232	ENSJJAG00000013503	Poc1b	98	55.079
ENSJJAG00000018739	Poc1a	96	35.659	ENSJJAG00000024197	Wdr5	91	35.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018739	Poc1a	98	94.318	ENSG00000164087	POC1A	100	92.683	Homo_sapiens
ENSJJAG00000018739	Poc1a	95	75.862	ENSAPOG00000002677	POC1A	97	76.115	Acanthochromis_polyacanthus
ENSJJAG00000018739	Poc1a	99	93.267	ENSAMEG00000009136	POC1A	98	93.267	Ailuropoda_melanoleuca
ENSJJAG00000018739	Poc1a	95	84.615	ENSACIG00000018288	poc1a	77	84.615	Amphilophus_citrinellus
ENSJJAG00000018739	Poc1a	95	78.545	ENSAOCG00000001066	POC1A	97	78.595	Amphiprion_ocellaris
ENSJJAG00000018739	Poc1a	97	78.261	ENSAPEG00000005795	poc1a	96	73.988	Amphiprion_percula
ENSJJAG00000018739	Poc1a	98	78.250	ENSAPLG00000007756	POC1A	99	78.250	Anas_platyrhynchos
ENSJJAG00000018739	Poc1a	100	92.138	ENSANAG00000030897	POC1A	100	92.138	Aotus_nancymaae
ENSJJAG00000018739	Poc1a	93	77.152	ENSACLG00000017869	POC1A	99	76.797	Astatotilapia_calliptera
ENSJJAG00000018739	Poc1a	96	70.845	ENSAMXG00000024703	poc1a	93	70.845	Astyanax_mexicanus
ENSJJAG00000018739	Poc1a	99	86.035	ENSBTAG00000001471	POC1A	100	91.057	Bos_taurus
ENSJJAG00000018739	Poc1a	98	94.318	ENSCJAG00000005972	POC1A	98	94.318	Callithrix_jacchus
ENSJJAG00000018739	Poc1a	100	86.978	ENSCAFG00020022379	POC1A	100	86.978	Canis_lupus_dingo
ENSJJAG00000018739	Poc1a	99	92.519	ENSCHIG00000002571	POC1A	99	92.519	Capra_hircus
ENSJJAG00000018739	Poc1a	98	95.455	ENSTSYG00000008302	POC1A	98	95.455	Carlito_syrichta
ENSJJAG00000018739	Poc1a	82	95.911	ENSCAPG00000016201	POC1A	93	81.842	Cavia_aperea
ENSJJAG00000018739	Poc1a	100	92.179	ENSCPOG00000006740	POC1A	100	92.179	Cavia_porcellus
ENSJJAG00000018739	Poc1a	100	92.383	ENSCCAG00000023380	POC1A	100	92.383	Cebus_capucinus
ENSJJAG00000018739	Poc1a	100	92.138	ENSCATG00000021822	POC1A	100	92.138	Cercocebus_atys
ENSJJAG00000018739	Poc1a	99	87.115	ENSCLAG00000010593	POC1A	99	87.115	Chinchilla_lanigera
ENSJJAG00000018739	Poc1a	97	92.954	ENSCSAG00000013862	POC1A	100	92.954	Chlorocebus_sabaeus
ENSJJAG00000018739	Poc1a	78	86.347	ENSCPBG00000016728	POC1A	98	86.347	Chrysemys_picta_bellii
ENSJJAG00000018739	Poc1a	96	67.372	ENSCSAVG00000008477	-	99	67.372	Ciona_savignyi
ENSJJAG00000018739	Poc1a	98	94.587	ENSCANG00000033064	POC1A	98	94.587	Colobus_angolensis_palliatus
ENSJJAG00000018739	Poc1a	99	93.258	ENSCGRG00001007357	Poc1a	99	93.258	Cricetulus_griseus_chok1gshd
ENSJJAG00000018739	Poc1a	96	66.327	ENSCSEG00000010287	POC1A	93	66.327	Cynoglossus_semilaevis
ENSJJAG00000018739	Poc1a	97	66.019	ENSCVAG00000015594	POC1A	98	76.159	Cyprinodon_variegatus
ENSJJAG00000018739	Poc1a	75	59.310	ENSEBUG00000008246	POC1A	55	59.310	Eptatretus_burgeri
ENSJJAG00000018739	Poc1a	87	67.093	ENSEBUG00000002614	POC1A	93	67.093	Eptatretus_burgeri
ENSJJAG00000018739	Poc1a	94	61.324	ENSEBUG00000008013	poc1a	85	60.544	Eptatretus_burgeri
ENSJJAG00000018739	Poc1a	97	68.434	ENSELUG00000015504	poc1a	98	68.519	Esox_lucius
ENSJJAG00000018739	Poc1a	100	93.857	ENSFCAG00000015704	POC1A	100	93.857	Felis_catus
ENSJJAG00000018739	Poc1a	99	74.201	ENSFALG00000008922	POC1A	99	74.201	Ficedula_albicollis
ENSJJAG00000018739	Poc1a	98	94.034	ENSFDAG00000011606	POC1A	98	94.034	Fukomys_damarensis
ENSJJAG00000018739	Poc1a	98	68.579	ENSFHEG00000015504	POC1A	98	75.828	Fundulus_heteroclitus
ENSJJAG00000018739	Poc1a	97	80.460	ENSGALG00000034572	-	97	80.460	Gallus_gallus
ENSJJAG00000018739	Poc1a	97	69.674	ENSGACG00000007015	poc1a	96	69.674	Gasterosteus_aculeatus
ENSJJAG00000018739	Poc1a	99	77.171	ENSGAGG00000014637	POC1A	99	77.171	Gopherus_agassizii
ENSJJAG00000018739	Poc1a	98	94.034	ENSGGOG00000006652	POC1A	98	94.034	Gorilla_gorilla
ENSJJAG00000018739	Poc1a	100	93.855	ENSHGLG00000013436	POC1A	100	93.855	Heterocephalus_glaber_female
ENSJJAG00000018739	Poc1a	100	92.138	ENSHGLG00100003479	POC1A	100	92.138	Heterocephalus_glaber_male
ENSJJAG00000018739	Poc1a	97	68.608	ENSIPUG00000001227	POC1A	96	68.106	Ictalurus_punctatus
ENSJJAG00000018739	Poc1a	100	93.017	ENSSTOG00000002638	POC1A	100	93.017	Ictidomys_tridecemlineatus
ENSJJAG00000018739	Poc1a	97	72.136	ENSLBEG00000016119	POC1A	98	75.748	Labrus_bergylta
ENSJJAG00000018739	Poc1a	100	68.337	ENSLACG00000018788	POC1A	92	77.358	Latimeria_chalumnae
ENSJJAG00000018739	Poc1a	97	72.637	ENSLOCG00000013801	poc1a	96	72.637	Lepisosteus_oculatus
ENSJJAG00000018739	Poc1a	99	84.367	ENSLAFG00000028434	POC1A	99	88.667	Loxodonta_africana
ENSJJAG00000018739	Poc1a	97	92.683	ENSMFAG00000001970	POC1A	100	92.683	Macaca_fascicularis
ENSJJAG00000018739	Poc1a	100	92.138	ENSMMUG00000012485	POC1A	100	92.138	Macaca_mulatta
ENSJJAG00000018739	Poc1a	97	92.412	ENSMNEG00000042811	POC1A	100	92.412	Macaca_nemestrina
ENSJJAG00000018739	Poc1a	98	94.318	ENSMLEG00000039574	POC1A	100	92.683	Mandrillus_leucophaeus
ENSJJAG00000018739	Poc1a	95	73.720	ENSMAMG00000014233	POC1A	98	73.720	Mastacembelus_armatus
ENSJJAG00000018739	Poc1a	93	77.152	ENSMZEG00005013503	POC1A	99	76.797	Maylandia_zebra
ENSJJAG00000018739	Poc1a	97	83.548	ENSMGAG00000001628	POC1A	98	68.172	Meleagris_gallopavo
ENSJJAG00000018739	Poc1a	99	93.820	ENSMAUG00000017403	Poc1a	99	93.820	Mesocricetus_auratus
ENSJJAG00000018739	Poc1a	98	95.455	ENSMICG00000002709	POC1A	98	95.455	Microcebus_murinus
ENSJJAG00000018739	Poc1a	99	87.222	ENSMOCG00000003396	Poc1a	100	92.267	Microtus_ochrogaster
ENSJJAG00000018739	Poc1a	97	65.482	ENSMMOG00000010427	poc1a	93	65.482	Mola_mola
ENSJJAG00000018739	Poc1a	89	83.438	ENSMODG00000011717	POC1A	96	78.591	Monodelphis_domestica
ENSJJAG00000018739	Poc1a	97	72.881	ENSMALG00000009054	poc1a	93	72.881	Monopterus_albus
ENSJJAG00000018739	Poc1a	100	92.737	MGP_CAROLIEiJ_G0032617	Poc1a	100	92.737	Mus_caroli
ENSJJAG00000018739	Poc1a	100	92.458	ENSMUSG00000023345	Poc1a	100	92.458	Mus_musculus
ENSJJAG00000018739	Poc1a	100	92.179	MGP_PahariEiJ_G0015485	Poc1a	100	92.179	Mus_pahari
ENSJJAG00000018739	Poc1a	100	92.179	MGP_SPRETEiJ_G0033763	Poc1a	100	92.179	Mus_spretus
ENSJJAG00000018739	Poc1a	100	92.629	ENSMPUG00000011723	POC1A	100	92.629	Mustela_putorius_furo
ENSJJAG00000018739	Poc1a	99	91.771	ENSMLUG00000015092	POC1A	91	91.771	Myotis_lucifugus
ENSJJAG00000018739	Poc1a	100	92.875	ENSNGAG00000005212	Poc1a	100	92.875	Nannospalax_galili
ENSJJAG00000018739	Poc1a	97	63.990	ENSNBRG00000022135	poc1a	98	76.846	Neolamprologus_brichardi
ENSJJAG00000018739	Poc1a	98	94.318	ENSNLEG00000007084	POC1A	100	92.412	Nomascus_leucogenys
ENSJJAG00000018739	Poc1a	89	96.429	ENSMEUG00000007715	-	79	96.429	Notamacropus_eugenii
ENSJJAG00000018739	Poc1a	98	90.323	ENSOPRG00000008831	POC1A	91	90.323	Ochotona_princeps
ENSJJAG00000018739	Poc1a	99	91.811	ENSODEG00000018290	POC1A	99	91.811	Octodon_degus
ENSJJAG00000018739	Poc1a	93	76.490	ENSONIG00000014378	POC1A	99	76.144	Oreochromis_niloticus
ENSJJAG00000018739	Poc1a	98	92.412	ENSOCUG00000002080	POC1A	100	92.412	Oryctolagus_cuniculus
ENSJJAG00000018739	Poc1a	96	84.615	ENSOMEG00000019834	POC1A	97	71.385	Oryzias_melastigma
ENSJJAG00000018739	Poc1a	95	91.223	ENSOGAG00000032245	POC1A	99	87.129	Otolemur_garnettii
ENSJJAG00000018739	Poc1a	99	92.269	ENSOARG00000006352	POC1A	99	92.269	Ovis_aries
ENSJJAG00000018739	Poc1a	98	94.318	ENSPPAG00000043583	POC1A	100	92.412	Pan_paniscus
ENSJJAG00000018739	Poc1a	100	93.857	ENSPPRG00000003365	POC1A	100	93.857	Panthera_pardus
ENSJJAG00000018739	Poc1a	91	94.309	ENSPTIG00000005388	POC1A	100	94.309	Panthera_tigris_altaica
ENSJJAG00000018739	Poc1a	98	94.318	ENSPTRG00000014989	POC1A	100	92.683	Pan_troglodytes
ENSJJAG00000018739	Poc1a	89	83.072	ENSPSIG00000014809	POC1A	92	82.154	Pelodiscus_sinensis
ENSJJAG00000018739	Poc1a	97	67.742	ENSPMGG00000005356	poc1a	96	67.742	Periophthalmus_magnuspinnatus
ENSJJAG00000018739	Poc1a	94	89.785	ENSPEMG00000024131	Poc1a	100	92.661	Peromyscus_maniculatus_bairdii
ENSJJAG00000018739	Poc1a	87	77.023	ENSPMAG00000000333	poc1a	76	77.023	Petromyzon_marinus
ENSJJAG00000018739	Poc1a	99	78.660	ENSPCIG00000018160	POC1A	99	78.660	Phascolarctos_cinereus
ENSJJAG00000018739	Poc1a	100	92.138	ENSPPYG00000013816	POC1A	100	92.138	Pongo_abelii
ENSJJAG00000018739	Poc1a	100	89.189	ENSPCAG00000002118	POC1A	100	89.189	Procavia_capensis
ENSJJAG00000018739	Poc1a	98	96.023	ENSPCOG00000012625	POC1A	100	94.309	Propithecus_coquereli
ENSJJAG00000018739	Poc1a	100	72.482	ENSPVAG00000012480	POC1A	100	72.482	Pteropus_vampyrus
ENSJJAG00000018739	Poc1a	99	68.642	ENSPNYG00000019517	poc1a	99	68.642	Pundamilia_nyererei
ENSJJAG00000018739	Poc1a	98	69.249	ENSPNAG00000007556	POC1A	96	79.233	Pygocentrus_nattereri
ENSJJAG00000018739	Poc1a	96	87.568	ENSRNOG00000037295	Poc1a	100	87.568	Rattus_norvegicus
ENSJJAG00000018739	Poc1a	98	94.602	ENSRBIG00000031748	POC1A	100	92.683	Rhinopithecus_bieti
ENSJJAG00000018739	Poc1a	98	94.602	ENSRROG00000044472	POC1A	100	92.683	Rhinopithecus_roxellana
ENSJJAG00000018739	Poc1a	100	91.781	ENSSBOG00000027902	POC1A	100	93.496	Saimiri_boliviensis_boliviensis
ENSJJAG00000018739	Poc1a	95	76.978	ENSSMAG00000013505	POC1A	96	76.978	Scophthalmus_maximus
ENSJJAG00000018739	Poc1a	92	84.615	ENSSDUG00000016161	POC1A	97	77.152	Seriola_dumerili
ENSJJAG00000018739	Poc1a	93	84.615	ENSSLDG00000003828	POC1A	95	76.817	Seriola_lalandi_dorsalis
ENSJJAG00000018739	Poc1a	97	78.819	ENSSPUG00000008656	POC1A	99	62.045	Sphenodon_punctatus
ENSJJAG00000018739	Poc1a	97	59.204	ENSSPAG00000020330	POC1A	93	59.204	Stegastes_partitus
ENSJJAG00000018739	Poc1a	100	91.892	ENSSSCG00000011426	POC1A	100	91.892	Sus_scrofa
ENSJJAG00000018739	Poc1a	98	73.250	ENSTGUG00000006036	POC1A	99	73.250	Taeniopygia_guttata
ENSJJAG00000018739	Poc1a	96	64.607	ENSTRUG00000007900	POC1A	96	64.607	Takifugu_rubripes
ENSJJAG00000018739	Poc1a	97	64.624	ENSTNIG00000014818	POC1A	97	57.505	Tetraodon_nigroviridis
ENSJJAG00000018739	Poc1a	100	89.435	ENSTTRG00000016798	POC1A	100	89.435	Tursiops_truncatus
ENSJJAG00000018739	Poc1a	99	93.516	ENSUAMG00000020816	POC1A	99	93.516	Ursus_americanus
ENSJJAG00000018739	Poc1a	91	92.954	ENSUMAG00000021482	POC1A	100	92.954	Ursus_maritimus
ENSJJAG00000018739	Poc1a	97	65.952	ENSXETG00000010813	poc1a	98	63.964	Xenopus_tropicalis