EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000018834 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 1020 bases
Position: chrJH725449.1:37222777-37223796
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000017204	RNA_pol_L_2	PF13656.6	5.6e-28	1	1
ENSJJAP00000017206	RNA_pol_L_2	PF13656.6	6.6e-28	1	1
ENSJJAP00000017204	RNA_pol_L	PF01193.24	2.5e-09	1	1
ENSJJAP00000017206	RNA_pol_L	PF01193.24	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000023722	-	354	-	ENSJJAP00000017204	117 (aa)	-	-
ENSJJAT00000023724	-	366	-	ENSJJAP00000017206	121 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000018834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000018834	-	100	94.872	ENSJJAG00000013854	-	100	94.872
ENSJJAG00000018834	-	85	31.068	ENSJJAG00000022671	-	86	31.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018834	-	91	95.327	ENSG00000228049	POLR2J2	98	91.228	Homo_sapiens
ENSJJAG00000018834	-	100	94.872	ENSG00000005075	POLR2J	100	94.872	Homo_sapiens
ENSJJAG00000018834	-	100	89.744	ENSAPOG00000019538	polr2j	100	89.744	Acanthochromis_polyacanthus
ENSJJAG00000018834	-	100	87.402	ENSAMEG00000015480	-	100	87.402	Ailuropoda_melanoleuca
ENSJJAG00000018834	-	93	68.182	ENSACIG00000014549	POLR2J2	91	68.182	Amphilophus_citrinellus
ENSJJAG00000018834	-	100	88.889	ENSAOCG00000006937	polr2j	100	88.889	Amphiprion_ocellaris
ENSJJAG00000018834	-	100	89.744	ENSAPEG00000021761	polr2j	100	89.744	Amphiprion_percula
ENSJJAG00000018834	-	100	89.744	ENSATEG00000013312	-	100	89.744	Anabas_testudineus
ENSJJAG00000018834	-	100	89.744	ENSATEG00000009731	polr2j	100	89.744	Anabas_testudineus
ENSJJAG00000018834	-	86	92.079	ENSAPLG00000003744	-	100	92.079	Anas_platyrhynchos
ENSJJAG00000018834	-	100	86.325	ENSACAG00000000251	POLR2J	100	86.325	Anolis_carolinensis
ENSJJAG00000018834	-	100	89.744	ENSACLG00000014564	polr2j	100	89.744	Astatotilapia_calliptera
ENSJJAG00000018834	-	100	91.453	ENSAMXG00000007517	polr2j	100	91.453	Astyanax_mexicanus
ENSJJAG00000018834	-	62	67.123	ENSBTAG00000048046	-	61	67.123	Bos_taurus
ENSJJAG00000018834	-	98	66.087	WBGene00012187	rpb-11	94	65.517	Caenorhabditis_elegans
ENSJJAG00000018834	-	100	94.872	ENSCJAG00000016203	-	100	94.872	Callithrix_jacchus
ENSJJAG00000018834	-	100	94.872	ENSCAFG00000013683	-	100	94.872	Canis_familiaris
ENSJJAG00000018834	-	85	93.939	ENSTSYG00000029243	-	85	93.939	Carlito_syrichta
ENSJJAG00000018834	-	100	94.872	ENSCPOG00000001401	-	100	94.872	Cavia_porcellus
ENSJJAG00000018834	-	100	70.085	ENSCATG00000016595	-	87	85.542	Cercocebus_atys
ENSJJAG00000018834	-	100	94.872	ENSCLAG00000005238	-	100	94.872	Chinchilla_lanigera
ENSJJAG00000018834	-	100	94.872	ENSCSAG00000018092	-	100	94.872	Chlorocebus_sabaeus
ENSJJAG00000018834	-	100	77.778	ENSCING00000020531	-	100	77.778	Ciona_intestinalis
ENSJJAG00000018834	-	100	77.778	ENSCSAVG00000006948	-	100	77.778	Ciona_savignyi
ENSJJAG00000018834	-	100	94.872	ENSCGRG00001012814	Polr2j	100	94.872	Cricetulus_griseus_chok1gshd
ENSJJAG00000018834	-	100	80.342	ENSCGRG00000008433	Polr2j	100	80.342	Cricetulus_griseus_crigri
ENSJJAG00000018834	-	100	88.889	ENSCSEG00000020352	polr2j	100	88.889	Cynoglossus_semilaevis
ENSJJAG00000018834	-	100	88.889	ENSCVAG00000014267	polr2j	100	88.889	Cyprinodon_variegatus
ENSJJAG00000018834	-	100	90.598	ENSDARG00000035146	polr2j	100	90.598	Danio_rerio
ENSJJAG00000018834	-	100	94.872	ENSDORG00000005934	Polr2j	100	94.872	Dipodomys_ordii
ENSJJAG00000018834	-	98	73.913	FBgn0032634	Rpb11	98	73.913	Drosophila_melanogaster
ENSJJAG00000018834	-	100	59.829	ENSEBUG00000016100	polr2j	100	59.829	Eptatretus_burgeri
ENSJJAG00000018834	-	100	94.872	ENSEASG00005016864	-	100	94.872	Equus_asinus_asinus
ENSJJAG00000018834	-	100	90.598	ENSELUG00000012822	polr2j	100	90.598	Esox_lucius
ENSJJAG00000018834	-	100	94.872	ENSFCAG00000000377	-	100	94.872	Felis_catus
ENSJJAG00000018834	-	100	94.872	ENSFALG00000009523	POLR2J	100	94.872	Ficedula_albicollis
ENSJJAG00000018834	-	100	94.872	ENSFDAG00000010507	-	100	94.872	Fukomys_damarensis
ENSJJAG00000018834	-	100	89.744	ENSFHEG00000006625	polr2j	100	89.744	Fundulus_heteroclitus
ENSJJAG00000018834	-	100	90.598	ENSGMOG00000018207	polr2j	100	90.598	Gadus_morhua
ENSJJAG00000018834	-	100	94.872	ENSGALG00000030808	-	100	94.872	Gallus_gallus
ENSJJAG00000018834	-	100	89.744	ENSGAFG00000019555	polr2j	100	89.744	Gambusia_affinis
ENSJJAG00000018834	-	100	89.744	ENSGACG00000003310	polr2j	100	89.744	Gasterosteus_aculeatus
ENSJJAG00000018834	-	97	84.956	ENSGAGG00000018304	-	96	84.956	Gopherus_agassizii
ENSJJAG00000018834	-	85	89.000	ENSGGOG00000004519	-	80	89.000	Gorilla_gorilla
ENSJJAG00000018834	-	100	89.744	ENSHBUG00000008467	polr2j	100	89.744	Haplochromis_burtoni
ENSJJAG00000018834	-	100	94.872	ENSHGLG00000013598	POLR2J	100	94.872	Heterocephalus_glaber_female
ENSJJAG00000018834	-	100	94.872	ENSHGLG00100011242	POLR2J	100	94.872	Heterocephalus_glaber_male
ENSJJAG00000018834	-	100	89.744	ENSHCOG00000014827	polr2j	68	89.744	Hippocampus_comes
ENSJJAG00000018834	-	100	91.453	ENSIPUG00000023960	polr2j	100	91.453	Ictalurus_punctatus
ENSJJAG00000018834	-	100	94.872	ENSSTOG00000006377	POLR2J	100	94.872	Ictidomys_tridecemlineatus
ENSJJAG00000018834	-	100	89.744	ENSKMAG00000014581	polr2j	79	89.744	Kryptolebias_marmoratus
ENSJJAG00000018834	-	100	89.744	ENSLBEG00000005885	polr2j	100	89.744	Labrus_bergylta
ENSJJAG00000018834	-	100	91.453	ENSLOCG00000001885	polr2j	89	91.453	Lepisosteus_oculatus
ENSJJAG00000018834	-	100	94.872	ENSLAFG00000021507	-	100	94.872	Loxodonta_africana
ENSJJAG00000018834	-	99	90.000	ENSMMUG00000012019	POLR2J	100	85.385	Macaca_mulatta
ENSJJAG00000018834	-	100	89.744	ENSMAMG00000009374	polr2j	100	89.744	Mastacembelus_armatus
ENSJJAG00000018834	-	100	89.744	ENSMZEG00005011932	polr2j	100	89.744	Maylandia_zebra
ENSJJAG00000018834	-	100	94.872	ENSMGAG00000003534	POLR2J	100	94.872	Meleagris_gallopavo
ENSJJAG00000018834	-	100	94.872	ENSMAUG00000013049	Polr2j	100	94.872	Mesocricetus_auratus
ENSJJAG00000018834	-	77	93.333	ENSMICG00000026811	-	91	93.333	Microcebus_murinus
ENSJJAG00000018834	-	100	94.872	ENSMOCG00000001294	Polr2j	100	94.872	Microtus_ochrogaster
ENSJJAG00000018834	-	100	88.889	ENSMMOG00000013265	polr2j	100	88.889	Mola_mola
ENSJJAG00000018834	-	100	86.719	ENSMODG00000013617	-	100	86.719	Monodelphis_domestica
ENSJJAG00000018834	-	100	89.744	ENSMALG00000020749	polr2j	100	89.744	Monopterus_albus
ENSJJAG00000018834	-	100	94.872	MGP_CAROLIEiJ_G0027851	Polr2j	100	94.872	Mus_caroli
ENSJJAG00000018834	-	100	94.872	ENSMUSG00000039771	Polr2j	100	94.872	Mus_musculus
ENSJJAG00000018834	-	100	94.872	MGP_PahariEiJ_G0024434	Polr2j	100	94.872	Mus_pahari
ENSJJAG00000018834	-	100	94.872	MGP_SPRETEiJ_G0028853	Polr2j	100	94.872	Mus_spretus
ENSJJAG00000018834	-	100	94.872	ENSMLUG00000010467	POLR2J	100	94.872	Myotis_lucifugus
ENSJJAG00000018834	-	100	94.872	ENSNGAG00000023412	Polr2j	100	94.872	Nannospalax_galili
ENSJJAG00000018834	-	66	88.312	ENSNBRG00000006580	polr2j	59	88.312	Neolamprologus_brichardi
ENSJJAG00000018834	-	100	94.872	ENSODEG00000015648	-	100	94.872	Octodon_degus
ENSJJAG00000018834	-	100	74.359	ENSODEG00000008559	-	100	74.359	Octodon_degus
ENSJJAG00000018834	-	100	89.744	ENSONIG00000000259	polr2j	100	89.744	Oreochromis_niloticus
ENSJJAG00000018834	-	100	92.308	ENSOANG00000020912	POLR2J	100	92.308	Ornithorhynchus_anatinus
ENSJJAG00000018834	-	100	87.402	ENSOCUG00000023609	POLR2J	100	87.402	Oryctolagus_cuniculus
ENSJJAG00000018834	-	100	89.744	ENSORLG00000029046	polr2j	83	89.744	Oryzias_latipes
ENSJJAG00000018834	-	100	89.744	ENSORLG00020007625	polr2j	83	89.744	Oryzias_latipes_hni
ENSJJAG00000018834	-	100	89.744	ENSORLG00015003457	polr2j	83	89.744	Oryzias_latipes_hsok
ENSJJAG00000018834	-	100	88.889	ENSOMEG00000002097	polr2j	100	88.889	Oryzias_melastigma
ENSJJAG00000018834	-	100	67.969	ENSOGAG00000008250	-	100	67.969	Otolemur_garnettii
ENSJJAG00000018834	-	100	94.872	ENSOARG00000014204	-	98	94.872	Ovis_aries
ENSJJAG00000018834	-	100	94.872	ENSPPRG00000012439	-	100	94.872	Panthera_pardus
ENSJJAG00000018834	-	97	85.965	ENSPTIG00000018714	-	100	91.262	Panthera_tigris_altaica
ENSJJAG00000018834	-	85	93.000	ENSPSIG00000010173	-	100	93.000	Pelodiscus_sinensis
ENSJJAG00000018834	-	100	89.744	ENSPMGG00000021256	polr2j	100	89.744	Periophthalmus_magnuspinnatus
ENSJJAG00000018834	-	100	94.872	ENSPEMG00000015733	Polr2j	100	94.872	Peromyscus_maniculatus_bairdii
ENSJJAG00000018834	-	100	94.872	ENSPCIG00000009026	-	100	94.872	Phascolarctos_cinereus
ENSJJAG00000018834	-	100	89.744	ENSPFOG00000012001	polr2j	99	89.744	Poecilia_formosa
ENSJJAG00000018834	-	100	89.744	ENSPLAG00000014075	polr2j	100	89.744	Poecilia_latipinna
ENSJJAG00000018834	-	100	89.744	ENSPMEG00000020585	polr2j	100	89.744	Poecilia_mexicana
ENSJJAG00000018834	-	100	89.744	ENSPREG00000015255	polr2j	100	89.744	Poecilia_reticulata
ENSJJAG00000018834	-	100	94.872	ENSPCOG00000024573	-	100	94.872	Propithecus_coquereli
ENSJJAG00000018834	-	99	90.517	ENSPVAG00000017770	-	61	97.170	Pteropus_vampyrus
ENSJJAG00000018834	-	100	89.744	ENSPNYG00000014832	polr2j	100	89.744	Pundamilia_nyererei
ENSJJAG00000018834	-	100	88.889	ENSPNAG00000016595	polr2j	100	88.889	Pygocentrus_nattereri
ENSJJAG00000018834	-	100	94.872	ENSRNOG00000001430	Polr2j	100	94.872	Rattus_norvegicus
ENSJJAG00000018834	-	100	94.872	ENSSBOG00000025579	-	100	94.872	Saimiri_boliviensis_boliviensis
ENSJJAG00000018834	-	59	92.754	ENSSHAG00000010443	-	81	92.754	Sarcophilus_harrisii
ENSJJAG00000018834	-	93	91.743	ENSSFOG00015003371	polr2j	83	91.743	Scleropages_formosus
ENSJJAG00000018834	-	100	89.744	ENSSMAG00000006729	polr2j	100	89.744	Scophthalmus_maximus
ENSJJAG00000018834	-	100	89.744	ENSSDUG00000018490	polr2j	100	89.744	Seriola_dumerili
ENSJJAG00000018834	-	100	89.744	ENSSLDG00000022354	polr2j	100	89.744	Seriola_lalandi_dorsalis
ENSJJAG00000018834	-	100	94.872	ENSSPUG00000010802	-	100	94.872	Sphenodon_punctatus
ENSJJAG00000018834	-	100	89.744	ENSSPAG00000021953	polr2j	100	89.744	Stegastes_partitus
ENSJJAG00000018834	-	100	94.872	ENSSSCG00000007688	-	100	94.872	Sus_scrofa
ENSJJAG00000018834	-	100	78.632	ENSSSCG00000003703	-	83	78.632	Sus_scrofa
ENSJJAG00000018834	-	59	92.754	ENSTGUG00000004510	-	100	92.754	Taeniopygia_guttata
ENSJJAG00000018834	-	85	93.000	ENSTGUG00000004501	-	100	93.000	Taeniopygia_guttata
ENSJJAG00000018834	-	100	90.598	ENSTRUG00000020842	polr2j	100	90.598	Takifugu_rubripes
ENSJJAG00000018834	-	100	89.744	ENSTNIG00000002994	polr2j	100	89.744	Tetraodon_nigroviridis
ENSJJAG00000018834	-	91	80.374	ENSTBEG00000005797	-	70	80.374	Tupaia_belangeri
ENSJJAG00000018834	-	100	94.872	ENSUAMG00000011310	-	100	94.872	Ursus_americanus
ENSJJAG00000018834	-	100	94.872	ENSUMAG00000012594	-	100	94.872	Ursus_maritimus
ENSJJAG00000018834	-	100	93.162	ENSXETG00000001108	polr2j	100	93.162	Xenopus_tropicalis
ENSJJAG00000018834	-	100	89.744	ENSXMAG00000012422	polr2j	100	89.744	Xiphophorus_maculatus