EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000018915 (Gene tree)
Gene ID: 101604844
Gene Symbol: Rc3h1
Alias: 5730557L09Rik|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 96326 bases
Position: chrJH725464.1:24264085-24360410
Accession: 101604844
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000017318	zf-CCCH	PF00642.24	0.00018	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000023836	-	4088	XM_004658776	ENSJJAP00000017318	1127 (aa)	XP_004658833	UPI0003331AD6

Gene Model

Click here to download ENSJJAG00000018915's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018915's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000018915	Rc3h1	92	54.318	ENSJJAG00000022376	Rc3h2	87	54.318

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018915	Rc3h1	100	95.146	ENSG00000135870	RC3H1	100	95.322	Homo_sapiens
ENSJJAG00000018915	Rc3h1	100	94.965	ENSAMEG00000015657	RC3H1	100	94.788	Ailuropoda_melanoleuca
ENSJJAG00000018915	Rc3h1	100	86.475	ENSAPLG00000005341	RC3H1	100	85.939	Anas_platyrhynchos
ENSJJAG00000018915	Rc3h1	100	83.888	ENSACAG00000015271	RC3H1	100	83.860	Anolis_carolinensis
ENSJJAG00000018915	Rc3h1	100	94.881	ENSANAG00000036716	RC3H1	100	95.057	Aotus_nancymaae
ENSJJAG00000018915	Rc3h1	100	93.292	ENSBTAG00000052708	RC3H1	100	93.557	Bos_taurus
ENSJJAG00000018915	Rc3h1	100	94.528	ENSCJAG00000009106	RC3H1	100	94.704	Callithrix_jacchus
ENSJJAG00000018915	Rc3h1	100	94.611	ENSCAFG00000014434	RC3H1	100	94.876	Canis_familiaris
ENSJJAG00000018915	Rc3h1	100	94.528	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSJJAG00000018915	Rc3h1	100	93.728	ENSCHIG00000002873	RC3H1	100	93.993	Capra_hircus
ENSJJAG00000018915	Rc3h1	99	93.551	ENSTSYG00000003913	RC3H1	99	93.640	Carlito_syrichta
ENSJJAG00000018915	Rc3h1	100	90.459	ENSCPOG00000004349	RC3H1	100	90.371	Cavia_porcellus
ENSJJAG00000018915	Rc3h1	100	92.851	ENSCCAG00000025652	RC3H1	98	95.033	Cebus_capucinus
ENSJJAG00000018915	Rc3h1	100	95.057	ENSCATG00000033497	RC3H1	100	95.234	Cercocebus_atys
ENSJJAG00000018915	Rc3h1	100	93.292	ENSCLAG00000011267	RC3H1	100	93.645	Chinchilla_lanigera
ENSJJAG00000018915	Rc3h1	96	94.936	ENSCSAG00000011823	RC3H1	85	95.212	Chlorocebus_sabaeus
ENSJJAG00000018915	Rc3h1	100	88.215	ENSCPBG00000014670	RC3H1	100	87.687	Chrysemys_picta_bellii
ENSJJAG00000018915	Rc3h1	100	95.062	ENSCANG00000032120	RC3H1	100	95.238	Colobus_angolensis_palliatus
ENSJJAG00000018915	Rc3h1	100	94.341	ENSCGRG00001020812	Rc3h1	100	94.253	Cricetulus_griseus_chok1gshd
ENSJJAG00000018915	Rc3h1	100	94.341	ENSCGRG00000011952	Rc3h1	100	94.253	Cricetulus_griseus_crigri
ENSJJAG00000018915	Rc3h1	55	92.605	ENSDNOG00000011494	RC3H1	99	93.248	Dasypus_novemcinctus
ENSJJAG00000018915	Rc3h1	100	94.341	ENSDORG00000004855	Rc3h1	100	94.253	Dipodomys_ordii
ENSJJAG00000018915	Rc3h1	82	96.048	ENSETEG00000012064	RC3H1	87	96.048	Echinops_telfairi
ENSJJAG00000018915	Rc3h1	100	93.551	ENSEASG00005017000	RC3H1	100	93.640	Equus_asinus_asinus
ENSJJAG00000018915	Rc3h1	100	93.375	ENSECAG00000021208	RC3H1	100	93.463	Equus_caballus
ENSJJAG00000018915	Rc3h1	89	83.117	ENSEEUG00000014861	RC3H1	93	83.117	Erinaceus_europaeus
ENSJJAG00000018915	Rc3h1	100	95.146	ENSFCAG00000014924	RC3H1	100	95.410	Felis_catus
ENSJJAG00000018915	Rc3h1	100	85.315	ENSFALG00000002947	RC3H1	100	84.689	Ficedula_albicollis
ENSJJAG00000018915	Rc3h1	100	93.380	ENSFDAG00000013303	RC3H1	100	93.733	Fukomys_damarensis
ENSJJAG00000018915	Rc3h1	100	85.777	ENSGALG00000004587	RC3H1	100	85.237	Gallus_gallus
ENSJJAG00000018915	Rc3h1	100	86.544	ENSGAGG00000018194	RC3H1	100	86.368	Gopherus_agassizii
ENSJJAG00000018915	Rc3h1	100	89.144	ENSGGOG00000005735	RC3H1	100	89.144	Gorilla_gorilla
ENSJJAG00000018915	Rc3h1	88	88.633	ENSHGLG00000004183	-	100	88.633	Heterocephalus_glaber_female
ENSJJAG00000018915	Rc3h1	100	92.586	ENSHGLG00100008577	RC3H1	100	93.027	Heterocephalus_glaber_male
ENSJJAG00000018915	Rc3h1	100	95.141	ENSSTOG00000016033	RC3H1	100	95.495	Ictidomys_tridecemlineatus
ENSJJAG00000018915	Rc3h1	100	75.109	ENSLACG00000016186	RC3H1	100	78.174	Latimeria_chalumnae
ENSJJAG00000018915	Rc3h1	97	95.351	ENSLAFG00000004367	RC3H1	100	95.716	Loxodonta_africana
ENSJJAG00000018915	Rc3h1	100	94.969	ENSMFAG00000033725	RC3H1	100	95.234	Macaca_fascicularis
ENSJJAG00000018915	Rc3h1	100	94.793	ENSMMUG00000000630	RC3H1	100	95.057	Macaca_mulatta
ENSJJAG00000018915	Rc3h1	100	95.057	ENSMNEG00000035968	RC3H1	100	95.234	Macaca_nemestrina
ENSJJAG00000018915	Rc3h1	100	94.969	ENSMLEG00000037455	RC3H1	100	95.146	Mandrillus_leucophaeus
ENSJJAG00000018915	Rc3h1	88	94.854	ENSMAUG00000020864	Rc3h1	93	94.854	Mesocricetus_auratus
ENSJJAG00000018915	Rc3h1	100	94.876	ENSMICG00000003000	RC3H1	100	95.230	Microcebus_murinus
ENSJJAG00000018915	Rc3h1	93	93.074	ENSMOCG00000016587	Rc3h1	98	92.979	Microtus_ochrogaster
ENSJJAG00000018915	Rc3h1	100	90.300	ENSMODG00000004289	RC3H1	100	90.300	Monodelphis_domestica
ENSJJAG00000018915	Rc3h1	100	92.838	MGP_CAROLIEiJ_G0014756	Rc3h1	100	92.750	Mus_caroli
ENSJJAG00000018915	Rc3h1	100	92.573	ENSMUSG00000040423	Rc3h1	100	92.661	Mus_musculus
ENSJJAG00000018915	Rc3h1	100	92.573	MGP_PahariEiJ_G0027992	Rc3h1	100	92.485	Mus_pahari
ENSJJAG00000018915	Rc3h1	100	92.573	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.661	Mus_spretus
ENSJJAG00000018915	Rc3h1	100	94.704	ENSMPUG00000004747	RC3H1	100	94.616	Mustela_putorius_furo
ENSJJAG00000018915	Rc3h1	100	93.375	ENSMLUG00000011127	RC3H1	100	93.640	Myotis_lucifugus
ENSJJAG00000018915	Rc3h1	100	95.402	ENSNGAG00000011135	Rc3h1	100	95.402	Nannospalax_galili
ENSJJAG00000018915	Rc3h1	100	95.234	ENSNLEG00000015327	RC3H1	100	95.410	Nomascus_leucogenys
ENSJJAG00000018915	Rc3h1	99	81.206	ENSOPRG00000013068	RC3H1	99	81.560	Ochotona_princeps
ENSJJAG00000018915	Rc3h1	100	93.027	ENSODEG00000014185	RC3H1	100	93.027	Octodon_degus
ENSJJAG00000018915	Rc3h1	100	89.694	ENSOANG00000000924	RC3H1	100	89.607	Ornithorhynchus_anatinus
ENSJJAG00000018915	Rc3h1	99	93.907	ENSOCUG00000004930	RC3H1	98	94.265	Oryctolagus_cuniculus
ENSJJAG00000018915	Rc3h1	100	88.183	ENSOGAG00000004044	RC3H1	100	88.183	Otolemur_garnettii
ENSJJAG00000018915	Rc3h1	100	93.772	ENSOARG00000013011	RC3H1	100	94.035	Ovis_aries
ENSJJAG00000018915	Rc3h1	100	95.150	ENSPPAG00000039253	RC3H1	100	95.326	Pan_paniscus
ENSJJAG00000018915	Rc3h1	100	94.611	ENSPPRG00000009007	RC3H1	100	94.876	Panthera_pardus
ENSJJAG00000018915	Rc3h1	100	94.723	ENSPTIG00000015326	RC3H1	100	95.163	Panthera_tigris_altaica
ENSJJAG00000018915	Rc3h1	100	95.150	ENSPTRG00000001702	RC3H1	100	95.326	Pan_troglodytes
ENSJJAG00000018915	Rc3h1	100	94.969	ENSPANG00000008886	RC3H1	100	95.146	Papio_anubis
ENSJJAG00000018915	Rc3h1	100	87.709	ENSPSIG00000016181	RC3H1	100	87.884	Pelodiscus_sinensis
ENSJJAG00000018915	Rc3h1	100	93.634	ENSPEMG00000011966	Rc3h1	100	93.457	Peromyscus_maniculatus_bairdii
ENSJJAG00000018915	Rc3h1	70	93.916	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSJJAG00000018915	Rc3h1	100	92.498	ENSPPYG00000000490	RC3H1	98	95.033	Pongo_abelii
ENSJJAG00000018915	Rc3h1	80	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSJJAG00000018915	Rc3h1	83	93.583	ENSPCOG00000021795	RC3H1	96	94.011	Propithecus_coquereli
ENSJJAG00000018915	Rc3h1	100	86.030	ENSPVAG00000007593	RC3H1	100	86.207	Pteropus_vampyrus
ENSJJAG00000018915	Rc3h1	97	61.613	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSJJAG00000018915	Rc3h1	100	95.150	ENSRBIG00000037743	RC3H1	100	95.326	Rhinopithecus_bieti
ENSJJAG00000018915	Rc3h1	100	95.057	ENSRROG00000036546	RC3H1	100	95.234	Rhinopithecus_roxellana
ENSJJAG00000018915	Rc3h1	93	87.121	ENSSBOG00000010664	RC3H1	100	89.839	Saimiri_boliviensis_boliviensis
ENSJJAG00000018915	Rc3h1	100	89.339	ENSSHAG00000007589	RC3H1	100	89.339	Sarcophilus_harrisii
ENSJJAG00000018915	Rc3h1	87	86.486	ENSSARG00000004660	RC3H1	86	86.486	Sorex_araneus
ENSJJAG00000018915	Rc3h1	100	82.792	ENSSPUG00000018472	RC3H1	100	83.392	Sphenodon_punctatus
ENSJJAG00000018915	Rc3h1	100	94.876	ENSSSCG00000015498	RC3H1	100	95.053	Sus_scrofa
ENSJJAG00000018915	Rc3h1	100	86.116	ENSTGUG00000004090	RC3H1	100	85.400	Taeniopygia_guttata
ENSJJAG00000018915	Rc3h1	89	96.185	ENSTBEG00000005015	RC3H1	89	96.185	Tupaia_belangeri
ENSJJAG00000018915	Rc3h1	100	94.009	ENSTTRG00000008572	RC3H1	100	94.273	Tursiops_truncatus
ENSJJAG00000018915	Rc3h1	100	94.435	ENSUAMG00000019525	RC3H1	100	94.258	Ursus_americanus
ENSJJAG00000018915	Rc3h1	100	94.881	ENSUMAG00000020087	RC3H1	100	94.704	Ursus_maritimus
ENSJJAG00000018915	Rc3h1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSJJAG00000018915	Rc3h1	100	94.278	ENSVVUG00000014201	RC3H1	100	94.542	Vulpes_vulpes
ENSJJAG00000018915	Rc3h1	100	77.807	ENSXETG00000020030	rc3h1	100	77.633	Xenopus_tropicalis