EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000018925 (Gene tree)
Gene ID: -
Gene Symbol: Zfp39
Alias: CTfin33|Zfp-39
Full Name: zinc finger protein 39
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 13367 bases
Position: chrJH725459.1:1836637-1850003
Accession: 99183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	1	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	2	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	3	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	4	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	5	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	6	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	7	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	8	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	9	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	10	11
ENSJJAP00000017340	zf-C2H2	PF00096.26	4.3e-56	11	11
ENSJJAP00000017340	zf-met	PF12874.7	2.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000023858	-	2115	-	ENSJJAP00000017340	704 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000018925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000018925's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000018925	Zfp39	74	35.963	ENSJJAG00000011464	Prdm5	84	46.429
ENSJJAG00000018925	Zfp39	66	68.750	ENSJJAG00000019878	Zfp1	79	68.750
ENSJJAG00000018925	Zfp39	60	49.029	ENSJJAG00000000983	Zfp628	64	45.856
ENSJJAG00000018925	Zfp39	60	36.364	ENSJJAG00000016355	Gfi1b	61	36.364
ENSJJAG00000018925	Zfp39	92	46.113	ENSJJAG00000021900	-	98	46.113
ENSJJAG00000018925	Zfp39	59	37.908	ENSJJAG00000020922	-	80	37.195
ENSJJAG00000018925	Zfp39	62	41.053	ENSJJAG00000019328	Zfp423	70	41.053
ENSJJAG00000018925	Zfp39	60	34.154	ENSJJAG00000000816	Zfp319	85	34.154
ENSJJAG00000018925	Zfp39	58	36.364	ENSJJAG00000014351	Sall3	59	31.720
ENSJJAG00000018925	Zfp39	92	41.920	ENSJJAG00000012972	Zfp709	99	43.619
ENSJJAG00000018925	Zfp39	60	39.394	ENSJJAG00000011501	Gtf3a	88	39.394
ENSJJAG00000018925	Zfp39	66	31.905	ENSJJAG00000018599	Zfp784	78	33.654
ENSJJAG00000018925	Zfp39	64	38.845	ENSJJAG00000023633	Zfp672	90	38.298
ENSJJAG00000018925	Zfp39	59	41.489	ENSJJAG00000013954	Zfp64	72	41.489
ENSJJAG00000018925	Zfp39	92	44.628	ENSJJAG00000015716	Zfp202	63	44.177
ENSJJAG00000018925	Zfp39	59	45.614	ENSJJAG00000022622	-	100	45.614
ENSJJAG00000018925	Zfp39	92	45.246	ENSJJAG00000014350	Zfp961	76	45.246
ENSJJAG00000018925	Zfp39	53	34.959	ENSJJAG00000024400	Ovol1	52	37.333
ENSJJAG00000018925	Zfp39	72	36.502	ENSJJAG00000023435	Zfp597	68	36.502
ENSJJAG00000018925	Zfp39	92	55.602	ENSJJAG00000014531	Zfp661	97	55.602
ENSJJAG00000018925	Zfp39	62	51.601	ENSJJAG00000003567	Zfp768	50	51.042
ENSJJAG00000018925	Zfp39	63	43.590	ENSJJAG00000024260	-	67	43.367
ENSJJAG00000018925	Zfp39	52	51.562	ENSJJAG00000015468	-	65	40.260
ENSJJAG00000018925	Zfp39	59	33.333	ENSJJAG00000015259	Patz1	51	36.310
ENSJJAG00000018925	Zfp39	59	38.686	ENSJJAG00000017495	-	63	38.686
ENSJJAG00000018925	Zfp39	99	38.739	ENSJJAG00000017493	Zfp236	67	38.739
ENSJJAG00000018925	Zfp39	92	45.695	ENSJJAG00000020082	-	99	45.695
ENSJJAG00000018925	Zfp39	60	30.934	ENSJJAG00000021785	Zfp574	71	33.094
ENSJJAG00000018925	Zfp39	60	45.098	ENSJJAG00000011934	Zfp865	78	34.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000018925	Zfp39	92	62.424	ENSCPOG00000036704	-	99	62.424	Cavia_porcellus
ENSJJAG00000018925	Zfp39	99	72.175	ENSCGRG00001002406	Zfp39	99	72.175	Cricetulus_griseus_chok1gshd
ENSJJAG00000018925	Zfp39	99	72.175	ENSCGRG00000002730	Zfp39	99	72.175	Cricetulus_griseus_crigri
ENSJJAG00000018925	Zfp39	99	71.893	ENSMAUG00000001536	Zfp39	99	71.893	Mesocricetus_auratus
ENSJJAG00000018925	Zfp39	98	69.397	ENSMOCG00000017961	Zfp39	98	69.397	Microtus_ochrogaster
ENSJJAG00000018925	Zfp39	99	69.382	MGP_PahariEiJ_G0017548	Zfp39	99	69.382	Mus_pahari
ENSJJAG00000018925	Zfp39	99	70.225	ENSNGAG00000019853	Zfp39	99	70.225	Nannospalax_galili
ENSJJAG00000018925	Zfp39	71	80.000	ENSODEG00000000805	-	100	80.000	Octodon_degus
ENSJJAG00000018925	Zfp39	98	72.380	ENSPEMG00000009428	Zfp39	98	72.380	Peromyscus_maniculatus_bairdii
ENSJJAG00000018925	Zfp39	99	66.480	ENSRNOG00000014712	Zfp39	99	66.480	Rattus_norvegicus