EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000019072 (Gene tree)
Gene ID: 101605891
Gene Symbol: Chd5
Alias: 4930532L22Rik|B230399N07Rik
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 65526 bases
Position: chrJH725459.1:27331770-27397295
Accession: 101605891
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000017665	ResIII	PF04851.15	1e-07	1	1
ENSJJAP00000017658	ResIII	PF04851.15	1.2e-07	1	1
ENSJJAP00000017656	ResIII	PF04851.15	1.2e-07	1	1
ENSJJAP00000017647	ResIII	PF04851.15	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000024187	-	5739	-	ENSJJAP00000017665	1912 (aa)	-	-
ENSJJAT00000024180	-	5850	XM_004657403	ENSJJAP00000017658	1949 (aa)	XP_004657460	UPI00033341E8
ENSJJAT00000024178	-	5895	-	ENSJJAP00000017656	1964 (aa)	-	-
ENSJJAT00000024169	-	6017	-	ENSJJAP00000017647	1985 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000019072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000019072's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000019072	Chd5	97	69.730	ENSJJAG00000017633	Chd3	93	70.949
ENSJJAG00000019072	Chd5	94	73.132	ENSJJAG00000012394	Chd4	96	72.619

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000019072	Chd5	100	95.343	ENSG00000116254	CHD5	100	95.496	Homo_sapiens
ENSJJAG00000019072	Chd5	99	94.344	ENSAMEG00000009880	CHD5	99	94.442	Ailuropoda_melanoleuca
ENSJJAG00000019072	Chd5	94	78.956	ENSACIG00000012582	chd5	98	79.089	Amphilophus_citrinellus
ENSJJAG00000019072	Chd5	96	79.850	ENSAOCG00000020356	chd5	93	79.054	Amphiprion_ocellaris
ENSJJAG00000019072	Chd5	94	81.657	ENSAPLG00000015475	CHD5	98	81.745	Anas_platyrhynchos
ENSJJAG00000019072	Chd5	99	82.667	ENSACAG00000002441	CHD5	96	84.013	Anolis_carolinensis
ENSJJAG00000019072	Chd5	87	95.328	ENSANAG00000001078	CHD5	91	95.328	Aotus_nancymaae
ENSJJAG00000019072	Chd5	96	75.605	ENSACLG00000003012	chd5	99	75.013	Astatotilapia_calliptera
ENSJJAG00000019072	Chd5	91	77.582	ENSAMXG00000008921	chd5	98	82.169	Astyanax_mexicanus
ENSJJAG00000019072	Chd5	93	95.820	ENSBTAG00000040477	CHD5	100	95.820	Bos_taurus
ENSJJAG00000019072	Chd5	100	95.036	ENSCJAG00000000101	CHD5	100	95.189	Callithrix_jacchus
ENSJJAG00000019072	Chd5	93	95.927	ENSCAFG00000019545	CHD5	100	95.927	Canis_familiaris
ENSJJAG00000019072	Chd5	99	95.236	ENSCAFG00020008689	CHD5	98	94.807	Canis_lupus_dingo
ENSJJAG00000019072	Chd5	99	94.208	ENSCHIG00000015027	CHD5	99	93.213	Capra_hircus
ENSJJAG00000019072	Chd5	98	89.737	ENSTSYG00000033991	CHD5	99	90.334	Carlito_syrichta
ENSJJAG00000019072	Chd5	99	94.762	ENSCAPG00000009294	CHD5	99	95.495	Cavia_aperea
ENSJJAG00000019072	Chd5	99	94.762	ENSCPOG00000025080	CHD5	99	95.495	Cavia_porcellus
ENSJJAG00000019072	Chd5	100	95.138	ENSCCAG00000024756	CHD5	100	95.292	Cebus_capucinus
ENSJJAG00000019072	Chd5	100	94.473	ENSCATG00000043011	CHD5	100	94.626	Cercocebus_atys
ENSJJAG00000019072	Chd5	99	94.974	ENSCLAG00000010589	CHD5	99	95.654	Chinchilla_lanigera
ENSJJAG00000019072	Chd5	100	95.343	ENSCSAG00000000733	CHD5	100	95.496	Chlorocebus_sabaeus
ENSJJAG00000019072	Chd5	93	89.852	ENSCPBG00000019363	CHD5	100	89.742	Chrysemys_picta_bellii
ENSJJAG00000019072	Chd5	99	95.438	ENSCANG00000032302	CHD5	99	95.582	Colobus_angolensis_palliatus
ENSJJAG00000019072	Chd5	55	97.358	ENSCGRG00001011042	Chd5	100	97.358	Cricetulus_griseus_chok1gshd
ENSJJAG00000019072	Chd5	99	95.970	ENSCGRG00000011341	Chd5	99	96.017	Cricetulus_griseus_crigri
ENSJJAG00000019072	Chd5	96	78.833	ENSDARG00000105083	chd5	97	80.794	Danio_rerio
ENSJJAG00000019072	Chd5	96	67.100	ENSDARG00000025789	chd4b	96	67.689	Danio_rerio
ENSJJAG00000019072	Chd5	100	90.942	ENSDNOG00000046342	CHD5	100	90.686	Dasypus_novemcinctus
ENSJJAG00000019072	Chd5	99	94.609	ENSDORG00000005923	Chd5	99	95.379	Dipodomys_ordii
ENSJJAG00000019072	Chd5	99	93.439	ENSEASG00005021464	CHD5	99	92.546	Equus_asinus_asinus
ENSJJAG00000019072	Chd5	99	92.799	ENSECAG00000025043	CHD5	99	97.119	Equus_caballus
ENSJJAG00000019072	Chd5	77	99.070	ENSEEUG00000002772	CHD5	77	99.070	Erinaceus_europaeus
ENSJJAG00000019072	Chd5	93	77.432	ENSELUG00000010742	chd5	96	79.170	Esox_lucius
ENSJJAG00000019072	Chd5	100	94.831	ENSFCAG00000006319	CHD5	100	94.933	Felis_catus
ENSJJAG00000019072	Chd5	99	87.655	ENSFALG00000009740	CHD5	99	87.590	Ficedula_albicollis
ENSJJAG00000019072	Chd5	99	94.309	ENSFDAG00000012881	CHD5	96	94.362	Fukomys_damarensis
ENSJJAG00000019072	Chd5	100	86.939	ENSGALG00000000747	CHD5	100	86.786	Gallus_gallus
ENSJJAG00000019072	Chd5	57	82.705	ENSGACG00000004389	chd5	93	83.073	Gasterosteus_aculeatus
ENSJJAG00000019072	Chd5	96	87.286	ENSGAGG00000001590	CHD5	99	95.122	Gopherus_agassizii
ENSJJAG00000019072	Chd5	99	95.278	ENSGGOG00000000708	CHD5	99	95.426	Gorilla_gorilla
ENSJJAG00000019072	Chd5	96	76.338	ENSHBUG00000013453	chd5	99	75.798	Haplochromis_burtoni
ENSJJAG00000019072	Chd5	100	94.679	ENSHGLG00000018184	CHD5	100	95.357	Heterocephalus_glaber_female
ENSJJAG00000019072	Chd5	99	87.880	ENSHGLG00100013261	CHD5	97	88.924	Heterocephalus_glaber_male
ENSJJAG00000019072	Chd5	94	78.962	ENSIPUG00000005446	chd5	98	79.466	Ictalurus_punctatus
ENSJJAG00000019072	Chd5	99	94.444	ENSSTOG00000002778	CHD5	99	95.760	Ictidomys_tridecemlineatus
ENSJJAG00000019072	Chd5	96	82.581	ENSLOCG00000004944	chd5	95	81.629	Lepisosteus_oculatus
ENSJJAG00000019072	Chd5	99	94.496	ENSLAFG00000006348	CHD5	99	95.166	Loxodonta_africana
ENSJJAG00000019072	Chd5	99	95.181	ENSMFAG00000033993	CHD5	100	95.707	Macaca_fascicularis
ENSJJAG00000019072	Chd5	99	95.280	ENSMMUG00000016838	CHD5	99	95.426	Macaca_mulatta
ENSJJAG00000019072	Chd5	100	95.394	ENSMNEG00000040044	CHD5	100	95.548	Macaca_nemestrina
ENSJJAG00000019072	Chd5	99	91.910	ENSMLEG00000039166	CHD5	99	92.051	Mandrillus_leucophaeus
ENSJJAG00000019072	Chd5	96	75.552	ENSMZEG00005000841	chd5	93	80.743	Maylandia_zebra
ENSJJAG00000019072	Chd5	99	87.046	ENSMGAG00000001055	CHD5	99	86.905	Meleagris_gallopavo
ENSJJAG00000019072	Chd5	100	89.903	ENSMICG00000017862	CHD5	99	90.877	Microcebus_murinus
ENSJJAG00000019072	Chd5	100	96.025	ENSMOCG00000011049	Chd5	100	96.025	Microtus_ochrogaster
ENSJJAG00000019072	Chd5	86	79.475	ENSMODG00000006294	CHD5	78	93.649	Monodelphis_domestica
ENSJJAG00000019072	Chd5	96	78.911	ENSMALG00000002831	chd5	99	77.447	Monopterus_albus
ENSJJAG00000019072	Chd5	100	95.545	MGP_CAROLIEiJ_G0026857	Chd5	100	95.597	Mus_caroli
ENSJJAG00000019072	Chd5	100	95.258	ENSMUSG00000005045	Chd5	100	95.206	Mus_musculus
ENSJJAG00000019072	Chd5	100	95.668	MGP_PahariEiJ_G0029205	Chd5	100	95.720	Mus_pahari
ENSJJAG00000019072	Chd5	100	95.616	MGP_SPRETEiJ_G0027850	Chd5	100	95.668	Mus_spretus
ENSJJAG00000019072	Chd5	99	90.447	ENSMPUG00000007122	CHD5	99	91.179	Mustela_putorius_furo
ENSJJAG00000019072	Chd5	99	94.759	ENSNGAG00000019812	Chd5	97	94.675	Nannospalax_galili
ENSJJAG00000019072	Chd5	99	92.902	ENSNLEG00000010320	CHD5	99	92.879	Nomascus_leucogenys
ENSJJAG00000019072	Chd5	86	88.593	ENSOPRG00000004304	CHD5	87	88.760	Ochotona_princeps
ENSJJAG00000019072	Chd5	99	94.653	ENSODEG00000010262	CHD5	99	95.228	Octodon_degus
ENSJJAG00000019072	Chd5	93	78.292	ENSONIG00000000619	chd5	96	77.280	Oreochromis_niloticus
ENSJJAG00000019072	Chd5	96	72.761	ENSOANG00000001819	CHD5	98	72.708	Ornithorhynchus_anatinus
ENSJJAG00000019072	Chd5	99	92.111	ENSOGAG00000005703	CHD5	100	92.733	Otolemur_garnettii
ENSJJAG00000019072	Chd5	97	94.133	ENSOARG00000013425	CHD5	97	94.274	Ovis_aries
ENSJJAG00000019072	Chd5	99	95.228	ENSPPAG00000034048	CHD5	99	95.377	Pan_paniscus
ENSJJAG00000019072	Chd5	100	94.166	ENSPPRG00000009453	CHD5	100	94.268	Panthera_pardus
ENSJJAG00000019072	Chd5	99	87.410	ENSPTIG00000013926	CHD5	99	87.577	Panthera_tigris_altaica
ENSJJAG00000019072	Chd5	100	95.243	ENSPTRG00000000075	CHD5	100	95.396	Pan_troglodytes
ENSJJAG00000019072	Chd5	100	95.394	ENSPANG00000006765	CHD5	100	95.548	Papio_anubis
ENSJJAG00000019072	Chd5	94	79.212	ENSPKIG00000004282	chd5	98	77.875	Paramormyrops_kingsleyae
ENSJJAG00000019072	Chd5	94	83.062	ENSPSIG00000006414	CHD5	100	83.104	Pelodiscus_sinensis
ENSJJAG00000019072	Chd5	68	97.370	ENSPEMG00000014799	Chd5	100	97.370	Peromyscus_maniculatus_bairdii
ENSJJAG00000019072	Chd5	99	91.376	ENSPCIG00000028310	CHD5	100	89.264	Phascolarctos_cinereus
ENSJJAG00000019072	Chd5	96	76.997	ENSPLAG00000005343	chd5	99	75.621	Poecilia_latipinna
ENSJJAG00000019072	Chd5	95	95.979	ENSPPYG00000001952	CHD5	99	89.745	Pongo_abelii
ENSJJAG00000019072	Chd5	100	94.882	ENSPCOG00000022930	CHD5	100	95.650	Propithecus_coquereli
ENSJJAG00000019072	Chd5	96	77.754	ENSPNYG00000003183	chd5	98	77.961	Pundamilia_nyererei
ENSJJAG00000019072	Chd5	100	96.004	ENSRNOG00000011268	Chd5	100	96.004	Rattus_norvegicus
ENSJJAG00000019072	Chd5	94	97.073	ENSRBIG00000032140	CHD5	95	97.073	Rhinopithecus_bieti
ENSJJAG00000019072	Chd5	99	95.278	ENSRROG00000041146	CHD5	98	95.426	Rhinopithecus_roxellana
ENSJJAG00000019072	Chd5	100	89.019	ENSSBOG00000001955	CHD5	99	95.179	Saimiri_boliviensis_boliviensis
ENSJJAG00000019072	Chd5	96	85.797	ENSSHAG00000018641	CHD5	99	85.828	Sarcophilus_harrisii
ENSJJAG00000019072	Chd5	97	78.901	ENSSFOG00015006296	chd5	92	86.275	Scleropages_formosus
ENSJJAG00000019072	Chd5	96	78.790	ENSSDUG00000017526	chd5	95	82.072	Seriola_dumerili
ENSJJAG00000019072	Chd5	97	80.274	ENSSPUG00000010622	CHD5	98	80.063	Sphenodon_punctatus
ENSJJAG00000019072	Chd5	98	95.559	ENSSSCG00000003366	CHD5	100	95.872	Sus_scrofa
ENSJJAG00000019072	Chd5	93	83.883	ENSTGUG00000002634	-	100	84.394	Taeniopygia_guttata
ENSJJAG00000019072	Chd5	53	80.509	ENSTNIG00000004346	chd5	99	81.041	Tetraodon_nigroviridis
ENSJJAG00000019072	Chd5	100	92.994	ENSTTRG00000010468	CHD5	100	93.254	Tursiops_truncatus
ENSJJAG00000019072	Chd5	98	95.236	ENSUAMG00000024509	CHD5	99	94.633	Ursus_americanus
ENSJJAG00000019072	Chd5	98	90.100	ENSUMAG00000024173	CHD5	98	90.484	Ursus_maritimus
ENSJJAG00000019072	Chd5	99	93.378	ENSVVUG00000026480	CHD5	98	96.341	Vulpes_vulpes
ENSJJAG00000019072	Chd5	96	80.386	ENSXETG00000002904	chd5	99	79.776	Xenopus_tropicalis
ENSJJAG00000019072	Chd5	59	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus