EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000019447 (Gene tree)
Gene ID: 101599549
Gene Symbol: Scaf4
Alias: Sfrs15|Sra4|Srsf15
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 46833 bases
Position: chrJH725450.1:27865475-27912307
Accession: 101599549
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000018117	RRM_1	PF00076.22	2.5e-09	1	1
ENSJJAP00000018132	RRM_1	PF00076.22	2.5e-09	1	1
ENSJJAP00000018104	RRM_1	PF00076.22	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000024633	-	3348	-	ENSJJAP00000018104	1115 (aa)	-	-
ENSJJAT00000024661	-	3369	XM_004654565	ENSJJAP00000018132	1122 (aa)	XP_004654622	-
ENSJJAT00000024646	-	3324	-	ENSJJAP00000018117	1107 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000019447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000019447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000019447	Scaf4	99	89.464	ENSG00000156304	SCAF4	99	88.938	Homo_sapiens
ENSJJAG00000019447	Scaf4	61	57.312	ENSAPOG00000019615	scaf4b	53	74.051	Acanthochromis_polyacanthus
ENSJJAG00000019447	Scaf4	73	90.097	ENSAMEG00000014987	SCAF4	96	90.097	Ailuropoda_melanoleuca
ENSJJAG00000019447	Scaf4	58	65.044	ENSAOCG00000010433	scaf4b	55	75.316	Amphiprion_ocellaris
ENSJJAG00000019447	Scaf4	58	65.044	ENSAPEG00000010913	scaf4b	55	75.316	Amphiprion_percula
ENSJJAG00000019447	Scaf4	50	53.906	ENSATEG00000011758	scaf4b	54	72.840	Anabas_testudineus
ENSJJAG00000019447	Scaf4	99	73.726	ENSAPLG00000002509	SCAF4	99	66.609	Anas_platyrhynchos
ENSJJAG00000019447	Scaf4	95	69.976	ENSACAG00000002569	SCAF4	88	63.488	Anolis_carolinensis
ENSJJAG00000019447	Scaf4	99	89.561	ENSANAG00000037494	SCAF4	99	89.474	Aotus_nancymaae
ENSJJAG00000019447	Scaf4	93	49.132	ENSAMXG00000008585	scaf4a	59	61.171	Astyanax_mexicanus
ENSJJAG00000019447	Scaf4	99	88.830	ENSBTAG00000018855	SCAF4	99	88.380	Bos_taurus
ENSJJAG00000019447	Scaf4	99	89.395	ENSCJAG00000008993	SCAF4	99	91.130	Callithrix_jacchus
ENSJJAG00000019447	Scaf4	99	89.455	ENSCAFG00000008863	SCAF4	99	89.655	Canis_familiaris
ENSJJAG00000019447	Scaf4	99	87.478	ENSCAFG00020026019	SCAF4	100	89.484	Canis_lupus_dingo
ENSJJAG00000019447	Scaf4	99	87.969	ENSCHIG00000008385	SCAF4	99	87.807	Capra_hircus
ENSJJAG00000019447	Scaf4	92	92.123	ENSTSYG00000011344	SCAF4	98	92.308	Carlito_syrichta
ENSJJAG00000019447	Scaf4	100	86.614	ENSCPOG00000012443	SCAF4	99	86.527	Cavia_porcellus
ENSJJAG00000019447	Scaf4	99	89.886	ENSCCAG00000033727	SCAF4	99	89.534	Cebus_capucinus
ENSJJAG00000019447	Scaf4	99	88.724	ENSCATG00000030379	SCAF4	100	88.772	Cercocebus_atys
ENSJJAG00000019447	Scaf4	99	89.391	ENSCLAG00000006298	SCAF4	100	88.870	Chinchilla_lanigera
ENSJJAG00000019447	Scaf4	99	88.889	ENSCSAG00000009438	SCAF4	99	88.889	Chlorocebus_sabaeus
ENSJJAG00000019447	Scaf4	99	89.367	ENSCANG00000029847	SCAF4	99	89.192	Colobus_angolensis_palliatus
ENSJJAG00000019447	Scaf4	99	85.337	ENSCGRG00001020821	Scaf4	99	85.973	Cricetulus_griseus_chok1gshd
ENSJJAG00000019447	Scaf4	99	85.234	ENSCGRG00000014360	Scaf4	99	85.319	Cricetulus_griseus_crigri
ENSJJAG00000019447	Scaf4	66	53.846	ENSCSEG00000012808	-	62	60.633	Cynoglossus_semilaevis
ENSJJAG00000019447	Scaf4	56	60.633	ENSCVAG00000009142	scaf4b	54	73.718	Cyprinodon_variegatus
ENSJJAG00000019447	Scaf4	99	86.332	ENSDNOG00000019014	SCAF4	94	86.155	Dasypus_novemcinctus
ENSJJAG00000019447	Scaf4	91	80.120	ENSETEG00000000583	SCAF4	99	75.755	Echinops_telfairi
ENSJJAG00000019447	Scaf4	99	90.115	ENSEASG00005007756	SCAF4	99	89.938	Equus_asinus_asinus
ENSJJAG00000019447	Scaf4	99	89.771	ENSECAG00000014248	SCAF4	99	89.683	Equus_caballus
ENSJJAG00000019447	Scaf4	58	50.178	ENSELUG00000002779	SCAF8	59	70.290	Esox_lucius
ENSJJAG00000019447	Scaf4	99	89.201	ENSFCAG00000002228	SCAF4	99	88.938	Felis_catus
ENSJJAG00000019447	Scaf4	99	87.824	ENSFDAG00000017780	SCAF4	100	87.651	Fukomys_damarensis
ENSJJAG00000019447	Scaf4	57	55.253	ENSFHEG00000007634	scaf4b	51	79.137	Fundulus_heteroclitus
ENSJJAG00000019447	Scaf4	99	74.406	ENSGALG00000033965	SCAF4	99	67.986	Gallus_gallus
ENSJJAG00000019447	Scaf4	69	51.058	ENSGACG00000020580	scaf4a	52	70.732	Gasterosteus_aculeatus
ENSJJAG00000019447	Scaf4	91	87.151	ENSGGOG00000015557	SCAF4	96	89.628	Gorilla_gorilla
ENSJJAG00000019447	Scaf4	99	89.102	ENSHGLG00000010582	SCAF4	99	89.189	Heterocephalus_glaber_female
ENSJJAG00000019447	Scaf4	99	89.064	ENSHGLG00100009441	SCAF4	100	89.151	Heterocephalus_glaber_male
ENSJJAG00000019447	Scaf4	99	84.364	ENSSTOG00000004450	SCAF4	100	84.452	Ictidomys_tridecemlineatus
ENSJJAG00000019447	Scaf4	58	55.200	ENSKMAG00000005742	scaf4b	53	75.159	Kryptolebias_marmoratus
ENSJJAG00000019447	Scaf4	97	59.610	ENSLACG00000013913	SCAF4	58	71.086	Latimeria_chalumnae
ENSJJAG00000019447	Scaf4	94	56.328	ENSLOCG00000009162	scaf4a	94	52.706	Lepisosteus_oculatus
ENSJJAG00000019447	Scaf4	99	91.144	ENSLAFG00000010710	SCAF4	99	88.458	Loxodonta_africana
ENSJJAG00000019447	Scaf4	99	88.666	ENSMFAG00000037668	SCAF4	99	88.401	Macaca_fascicularis
ENSJJAG00000019447	Scaf4	99	88.579	ENSMMUG00000001712	SCAF4	99	88.143	Macaca_mulatta
ENSJJAG00000019447	Scaf4	99	89.225	ENSMNEG00000032966	SCAF4	99	89.086	Macaca_nemestrina
ENSJJAG00000019447	Scaf4	99	88.821	ENSMLEG00000039674	SCAF4	100	88.734	Mandrillus_leucophaeus
ENSJJAG00000019447	Scaf4	99	74.758	ENSMGAG00000014515	SCAF4	99	68.072	Meleagris_gallopavo
ENSJJAG00000019447	Scaf4	99	86.826	ENSMAUG00000013307	Scaf4	100	86.472	Mesocricetus_auratus
ENSJJAG00000019447	Scaf4	99	90.371	ENSMICG00000005256	SCAF4	100	89.929	Microcebus_murinus
ENSJJAG00000019447	Scaf4	98	87.254	ENSMOCG00000012087	Scaf4	99	85.953	Microtus_ochrogaster
ENSJJAG00000019447	Scaf4	99	81.609	ENSMODG00000021040	SCAF4	99	80.725	Monodelphis_domestica
ENSJJAG00000019447	Scaf4	99	88.660	MGP_CAROLIEiJ_G0020944	Scaf4	92	89.633	Mus_caroli
ENSJJAG00000019447	Scaf4	99	88.601	ENSMUSG00000022983	Scaf4	92	89.842	Mus_musculus
ENSJJAG00000019447	Scaf4	98	87.484	MGP_PahariEiJ_G0016649	Scaf4	92	87.752	Mus_pahari
ENSJJAG00000019447	Scaf4	65	84.211	MGP_SPRETEiJ_G0021850	Scaf4	98	84.754	Mus_spretus
ENSJJAG00000019447	Scaf4	100	87.948	ENSMPUG00000001078	SCAF4	99	88.035	Mustela_putorius_furo
ENSJJAG00000019447	Scaf4	99	74.621	ENSMLUG00000011472	SCAF4	77	81.257	Myotis_lucifugus
ENSJJAG00000019447	Scaf4	99	88.014	ENSNGAG00000005214	Scaf4	99	89.132	Nannospalax_galili
ENSJJAG00000019447	Scaf4	99	89.201	ENSNLEG00000003569	SCAF4	99	89.289	Nomascus_leucogenys
ENSJJAG00000019447	Scaf4	85	87.755	ENSOPRG00000007016	SCAF4	77	89.130	Ochotona_princeps
ENSJJAG00000019447	Scaf4	99	87.910	ENSODEG00000002718	SCAF4	99	87.737	Octodon_degus
ENSJJAG00000019447	Scaf4	56	65.447	ENSONIG00000004687	scaf4a	61	60.289	Oreochromis_niloticus
ENSJJAG00000019447	Scaf4	99	85.340	ENSOCUG00000008336	SCAF4	99	85.951	Oryctolagus_cuniculus
ENSJJAG00000019447	Scaf4	99	90.668	ENSOGAG00000014653	SCAF4	93	89.773	Otolemur_garnettii
ENSJJAG00000019447	Scaf4	99	87.533	ENSOARG00000013894	SCAF4	98	87.173	Ovis_aries
ENSJJAG00000019447	Scaf4	99	89.464	ENSPPAG00000028535	SCAF4	99	88.938	Pan_paniscus
ENSJJAG00000019447	Scaf4	99	89.270	ENSPPRG00000000635	SCAF4	100	89.006	Panthera_pardus
ENSJJAG00000019447	Scaf4	99	87.268	ENSPTIG00000021578	SCAF4	99	85.286	Panthera_tigris_altaica
ENSJJAG00000019447	Scaf4	99	89.464	ENSPTRG00000013848	SCAF4	99	88.938	Pan_troglodytes
ENSJJAG00000019447	Scaf4	99	88.594	ENSPANG00000017332	SCAF4	99	88.666	Papio_anubis
ENSJJAG00000019447	Scaf4	64	62.366	ENSPKIG00000022408	scaf4a	89	64.427	Paramormyrops_kingsleyae
ENSJJAG00000019447	Scaf4	99	74.009	ENSPSIG00000014242	SCAF4	97	71.982	Pelodiscus_sinensis
ENSJJAG00000019447	Scaf4	99	76.102	ENSPCIG00000028183	SCAF4	91	78.971	Phascolarctos_cinereus
ENSJJAG00000019447	Scaf4	62	51.737	ENSPLAG00000004403	-	52	71.338	Poecilia_latipinna
ENSJJAG00000019447	Scaf4	61	52.124	ENSPMEG00000006666	-	53	72.611	Poecilia_mexicana
ENSJJAG00000019447	Scaf4	61	51.737	ENSPREG00000013510	scaf4b	52	72.611	Poecilia_reticulata
ENSJJAG00000019447	Scaf4	99	89.561	ENSPPYG00000011355	SCAF4	100	89.437	Pongo_abelii
ENSJJAG00000019447	Scaf4	94	89.259	ENSPCAG00000009998	SCAF4	92	89.338	Procavia_capensis
ENSJJAG00000019447	Scaf4	99	89.543	ENSPCOG00000018710	SCAF4	99	89.367	Propithecus_coquereli
ENSJJAG00000019447	Scaf4	99	88.772	ENSPVAG00000005220	SCAF4	99	88.703	Pteropus_vampyrus
ENSJJAG00000019447	Scaf4	98	88.102	ENSRNOG00000002104	Scaf4	91	88.487	Rattus_norvegicus
ENSJJAG00000019447	Scaf4	99	87.820	ENSRBIG00000040007	SCAF4	99	87.775	Rhinopithecus_bieti
ENSJJAG00000019447	Scaf4	99	89.534	ENSRROG00000029488	SCAF4	99	89.564	Rhinopithecus_roxellana
ENSJJAG00000019447	Scaf4	100	81.432	ENSSHAG00000001581	SCAF4	99	80.371	Sarcophilus_harrisii
ENSJJAG00000019447	Scaf4	83	48.621	ENSSFOG00015006338	scaf4a	54	59.259	Scleropages_formosus
ENSJJAG00000019447	Scaf4	66	54.717	ENSSMAG00000003738	scaf4b	52	73.418	Scophthalmus_maximus
ENSJJAG00000019447	Scaf4	57	56.134	ENSSDUG00000012380	scaf4b	53	72.152	Seriola_dumerili
ENSJJAG00000019447	Scaf4	99	86.602	ENSSARG00000009994	SCAF4	99	86.165	Sorex_araneus
ENSJJAG00000019447	Scaf4	99	85.889	ENSSSCG00000021023	SCAF4	99	85.627	Sus_scrofa
ENSJJAG00000019447	Scaf4	75	77.996	ENSTGUG00000013464	SCAF4	61	81.503	Taeniopygia_guttata
ENSJJAG00000019447	Scaf4	50	53.788	ENSTRUG00000009536	-	64	60.092	Takifugu_rubripes
ENSJJAG00000019447	Scaf4	99	88.137	ENSTTRG00000010963	SCAF4	100	88.771	Tursiops_truncatus
ENSJJAG00000019447	Scaf4	99	87.279	ENSUAMG00000008860	SCAF4	99	86.926	Ursus_americanus
ENSJJAG00000019447	Scaf4	99	87.655	ENSUMAG00000016962	SCAF4	100	87.744	Ursus_maritimus
ENSJJAG00000019447	Scaf4	99	89.418	ENSVVUG00000002953	SCAF4	100	89.618	Vulpes_vulpes
ENSJJAG00000019447	Scaf4	99	54.850	ENSXETG00000007351	scaf4	62	64.192	Xenopus_tropicalis