EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000019506 (Gene tree)
Gene ID: 101597736
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 27993 bases
Position: chrJH725438.1:7540131-7568123
Accession: 101597736
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000018156	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000024685	-	1450	XM_004649962	ENSJJAP00000018156	215 (aa)	XP_004650019	UPI0003332244

Gene Model

Click here to download ENSJJAG00000019506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000019506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000019506	Rab5b	78	42.857	ENSJJAG00000020064	Rab30	83	42.857
ENSJJAG00000019506	Rab5b	97	86.124	ENSJJAG00000021181	Rab5c	97	86.124
ENSJJAG00000019506	Rab5b	65	30.000	ENSJJAG00000023091	Rras2	83	30.000
ENSJJAG00000019506	Rab5b	55	30.159	ENSJJAG00000011436	-	60	30.159
ENSJJAG00000019506	Rab5b	93	35.784	ENSJJAG00000005838	Rab9	99	35.784
ENSJJAG00000019506	Rab5b	74	37.037	ENSJJAG00000020094	Rab23	67	37.037
ENSJJAG00000019506	Rab5b	100	80.465	ENSJJAG00000020190	Rab5a	100	80.465
ENSJJAG00000019506	Rab5b	85	34.783	ENSJJAG00000019064	Rab12	81	34.783
ENSJJAG00000019506	Rab5b	78	35.882	ENSJJAG00000016977	Rab39b	80	35.882
ENSJJAG00000019506	Rab5b	62	30.282	ENSJJAG00000023105	Arl8a	73	30.282
ENSJJAG00000019506	Rab5b	82	32.787	ENSJJAG00000022529	-	96	32.787
ENSJJAG00000019506	Rab5b	90	45.361	ENSJJAG00000011551	-	98	45.361
ENSJJAG00000019506	Rab5b	91	43.689	ENSJJAG00000018891	Rab11b	94	43.689
ENSJJAG00000019506	Rab5b	75	35.152	ENSJJAG00000011100	Rab36	69	35.152
ENSJJAG00000019506	Rab5b	75	38.554	ENSJJAG00000007444	Rab33a	70	38.554
ENSJJAG00000019506	Rab5b	78	42.442	ENSJJAG00000014204	Rab7	83	42.442
ENSJJAG00000019506	Rab5b	82	45.198	ENSJJAG00000016545	Rab1b	87	45.198
ENSJJAG00000019506	Rab5b	89	38.860	ENSJJAG00000010575	Rab13	95	38.860
ENSJJAG00000019506	Rab5b	68	32.653	ENSJJAG00000011743	-	84	32.653
ENSJJAG00000019506	Rab5b	60	32.061	ENSJJAG00000020941	-	97	32.061
ENSJJAG00000019506	Rab5b	91	41.584	ENSJJAG00000021013	Rab25	94	41.584
ENSJJAG00000019506	Rab5b	76	32.727	ENSJJAG00000016513	-	90	31.579
ENSJJAG00000019506	Rab5b	91	41.176	ENSJJAG00000015445	Rab11a	94	41.176
ENSJJAG00000019506	Rab5b	91	41.176	ENSJJAG00000012036	-	94	41.176
ENSJJAG00000019506	Rab5b	74	37.195	ENSJJAG00000010792	Rabl2	72	37.195
ENSJJAG00000019506	Rab5b	75	43.478	ENSJJAG00000000676	Rab2a	76	43.478
ENSJJAG00000019506	Rab5b	91	46.939	ENSJJAG00000000852	Rab31	98	46.939
ENSJJAG00000019506	Rab5b	90	43.367	ENSJJAG00000014396	Rab1a	98	43.367
ENSJJAG00000019506	Rab5b	90	37.436	ENSJJAG00000010646	Rab35	96	37.436
ENSJJAG00000019506	Rab5b	75	44.720	ENSJJAG00000012923	-	75	44.720

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000019506	Rab5b	100	99.535	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSJJAG00000019506	Rab5b	100	98.157	ENSAMEG00000003196	RAB5B	100	98.157	Ailuropoda_melanoleuca
ENSJJAG00000019506	Rab5b	100	96.279	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSJJAG00000019506	Rab5b	100	99.535	ENSANAG00000033215	RAB5B	95	99.535	Aotus_nancymaae
ENSJJAG00000019506	Rab5b	100	99.070	ENSBTAG00000014129	RAB5B	100	99.070	Bos_taurus
ENSJJAG00000019506	Rab5b	100	99.535	ENSCJAG00000041780	RAB5B	95	99.535	Callithrix_jacchus
ENSJJAG00000019506	Rab5b	100	99.535	ENSCAFG00000000087	RAB5B	100	99.535	Canis_familiaris
ENSJJAG00000019506	Rab5b	100	99.535	ENSCAFG00020026094	RAB5B	100	99.535	Canis_lupus_dingo
ENSJJAG00000019506	Rab5b	97	99.519	ENSCHIG00000010333	RAB5B	96	99.519	Capra_hircus
ENSJJAG00000019506	Rab5b	100	99.070	ENSTSYG00000009576	RAB5B	100	99.070	Carlito_syrichta
ENSJJAG00000019506	Rab5b	100	99.535	ENSCPOG00000034818	RAB5B	100	99.535	Cavia_porcellus
ENSJJAG00000019506	Rab5b	100	98.605	ENSCCAG00000019480	RAB5B	100	98.605	Cebus_capucinus
ENSJJAG00000019506	Rab5b	83	99.441	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSJJAG00000019506	Rab5b	100	98.605	ENSCSAG00000005277	RAB5B	100	98.605	Chlorocebus_sabaeus
ENSJJAG00000019506	Rab5b	100	96.279	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSJJAG00000019506	Rab5b	100	99.070	ENSCGRG00001000428	Rab5b	100	99.070	Cricetulus_griseus_chok1gshd
ENSJJAG00000019506	Rab5b	100	99.070	ENSCGRG00000009508	-	100	99.070	Cricetulus_griseus_crigri
ENSJJAG00000019506	Rab5b	100	99.535	ENSDORG00000025063	Rab5b	100	99.535	Dipodomys_ordii
ENSJJAG00000019506	Rab5b	100	99.535	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSJJAG00000019506	Rab5b	100	98.605	ENSEEUG00000006745	RAB5B	100	98.605	Erinaceus_europaeus
ENSJJAG00000019506	Rab5b	100	99.535	ENSFDAG00000008326	RAB5B	100	99.535	Fukomys_damarensis
ENSJJAG00000019506	Rab5b	100	98.605	ENSHGLG00000005995	RAB5B	100	98.605	Heterocephalus_glaber_female
ENSJJAG00000019506	Rab5b	100	98.605	ENSHGLG00100012955	RAB5B	100	98.605	Heterocephalus_glaber_male
ENSJJAG00000019506	Rab5b	100	98.140	ENSSTOG00000010536	RAB5B	100	98.140	Ictidomys_tridecemlineatus
ENSJJAG00000019506	Rab5b	100	98.618	ENSLAFG00000018009	RAB5B	95	98.618	Loxodonta_africana
ENSJJAG00000019506	Rab5b	100	98.605	ENSMFAG00000029992	RAB5B	100	98.605	Macaca_fascicularis
ENSJJAG00000019506	Rab5b	100	98.605	ENSMMUG00000031853	RAB5B	100	98.605	Macaca_mulatta
ENSJJAG00000019506	Rab5b	100	98.605	ENSMNEG00000005338	RAB5B	100	98.605	Macaca_nemestrina
ENSJJAG00000019506	Rab5b	100	98.605	ENSMLEG00000034462	RAB5B	100	98.605	Mandrillus_leucophaeus
ENSJJAG00000019506	Rab5b	100	99.535	ENSMAUG00000011613	Rab5b	100	99.535	Mesocricetus_auratus
ENSJJAG00000019506	Rab5b	100	99.070	ENSMICG00000011086	RAB5B	100	99.070	Microcebus_murinus
ENSJJAG00000019506	Rab5b	100	99.535	ENSMUSG00000000711	Rab5b	100	99.535	Mus_musculus
ENSJJAG00000019506	Rab5b	100	99.535	MGP_PahariEiJ_G0031135	Rab5b	100	99.535	Mus_pahari
ENSJJAG00000019506	Rab5b	100	99.070	MGP_SPRETEiJ_G0016774	Rab5b	100	99.070	Mus_spretus
ENSJJAG00000019506	Rab5b	99	98.148	ENSMPUG00000000946	RAB5B	89	98.148	Mustela_putorius_furo
ENSJJAG00000019506	Rab5b	100	99.535	ENSNLEG00000017570	-	100	99.535	Nomascus_leucogenys
ENSJJAG00000019506	Rab5b	100	99.535	ENSOPRG00000007883	RAB5B	100	99.535	Ochotona_princeps
ENSJJAG00000019506	Rab5b	100	99.070	ENSODEG00000003860	RAB5B	100	99.070	Octodon_degus
ENSJJAG00000019506	Rab5b	100	99.535	ENSOCUG00000013895	RAB5B	95	99.535	Oryctolagus_cuniculus
ENSJJAG00000019506	Rab5b	100	99.535	ENSOARG00000010651	RAB5B	95	99.535	Ovis_aries
ENSJJAG00000019506	Rab5b	100	99.535	ENSPPAG00000035431	RAB5B	100	99.535	Pan_paniscus
ENSJJAG00000019506	Rab5b	100	99.535	ENSPTRG00000005071	RAB5B	97	99.043	Pan_troglodytes
ENSJJAG00000019506	Rab5b	99	97.664	ENSPANG00000021075	RAB5B	97	97.664	Papio_anubis
ENSJJAG00000019506	Rab5b	100	99.535	ENSPCOG00000016461	RAB5B	100	99.535	Propithecus_coquereli
ENSJJAG00000019506	Rab5b	100	99.070	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSJJAG00000019506	Rab5b	100	98.605	ENSRBIG00000013165	RAB5B	100	98.605	Rhinopithecus_bieti
ENSJJAG00000019506	Rab5b	100	98.605	ENSRROG00000037973	RAB5B	100	98.605	Rhinopithecus_roxellana
ENSJJAG00000019506	Rab5b	100	83.256	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSJJAG00000019506	Rab5b	100	99.070	ENSSHAG00000007727	RAB5B	100	99.070	Sarcophilus_harrisii
ENSJJAG00000019506	Rab5b	100	99.535	ENSSARG00000006237	RAB5B	100	99.535	Sorex_araneus
ENSJJAG00000019506	Rab5b	100	96.279	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSJJAG00000019506	Rab5b	100	99.535	ENSTTRG00000015001	RAB5B	100	99.535	Tursiops_truncatus
ENSJJAG00000019506	Rab5b	100	99.070	ENSUAMG00000014651	RAB5B	100	99.070	Ursus_americanus
ENSJJAG00000019506	Rab5b	100	99.070	ENSUMAG00000016263	RAB5B	100	99.070	Ursus_maritimus
ENSJJAG00000019506	Rab5b	68	100.000	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes