EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000019749 (Gene tree)
Gene ID: 101608778
Gene Symbol: -
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Plus strand
Length: 13725 bases
Position: chrJH725616.1:93982-107706
Accession: 101608778
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000018505	tRNA-synt_1g	PF09334.11	3.3e-11	1	1
ENSJJAP00000018505	Anticodon_1	PF08264.13	2e-33	1	1
ENSJJAP00000018505	tRNA-synt_1	PF00133.22	7e-203	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000025035	-	3860	XM_004671860	ENSJJAP00000018505	1262 (aa)	XP_004671917	UPI000332F1C5

Gene Model

Click here to download ENSJJAG00000019749's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000019749's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000019749	-	100	77.276	ENSJJAG00000015343	-	100	77.831
ENSJJAG00000019749	-	82	49.040	ENSJJAG00000011144	Vars2	92	50.555

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000019749	-	100	90.665	ENSG00000204394	VARS	100	91.379	Homo_sapiens
ENSJJAG00000019749	-	98	64.016	ENSAPOG00000020691	vars	99	64.016	Acanthochromis_polyacanthus
ENSJJAG00000019749	-	98	64.016	ENSAPOG00000020921	vars	99	64.016	Acanthochromis_polyacanthus
ENSJJAG00000019749	-	100	91.146	ENSAMEG00000006417	VARS	100	91.621	Ailuropoda_melanoleuca
ENSJJAG00000019749	-	100	64.803	ENSACIG00000013752	vars	100	65.043	Amphilophus_citrinellus
ENSJJAG00000019749	-	100	64.275	ENSAOCG00000002447	vars	100	63.965	Amphiprion_ocellaris
ENSJJAG00000019749	-	100	64.119	ENSAPEG00000010638	vars	99	63.941	Amphiprion_percula
ENSJJAG00000019749	-	100	64.516	ENSATEG00000020219	vars	100	64.516	Anabas_testudineus
ENSJJAG00000019749	-	90	70.547	ENSACAG00000029133	-	99	70.165	Anolis_carolinensis
ENSJJAG00000019749	-	100	91.060	ENSANAG00000015453	VARS	100	91.693	Aotus_nancymaae
ENSJJAG00000019749	-	100	64.103	ENSACLG00000025699	vars	97	64.341	Astatotilapia_calliptera
ENSJJAG00000019749	-	94	65.246	ENSAMXG00000017716	vars	95	64.921	Astyanax_mexicanus
ENSJJAG00000019749	-	100	90.902	ENSBTAG00000005631	VARS	100	91.535	Bos_taurus
ENSJJAG00000019749	-	100	90.665	ENSCJAG00000002604	VARS	100	91.297	Callithrix_jacchus
ENSJJAG00000019749	-	100	90.665	ENSCAFG00000000636	VARS	100	91.139	Canis_familiaris
ENSJJAG00000019749	-	94	90.963	ENSCAFG00020020790	VARS	96	91.470	Canis_lupus_dingo
ENSJJAG00000019749	-	100	90.744	ENSCHIG00000011008	VARS	100	91.377	Capra_hircus
ENSJJAG00000019749	-	100	91.614	ENSTSYG00000001567	VARS	100	92.247	Carlito_syrichta
ENSJJAG00000019749	-	91	89.187	ENSCAPG00000013736	VARS	99	89.100	Cavia_aperea
ENSJJAG00000019749	-	100	89.953	ENSCPOG00000000870	VARS	100	89.873	Cavia_porcellus
ENSJJAG00000019749	-	100	91.535	ENSCCAG00000035656	VARS	100	91.542	Cebus_capucinus
ENSJJAG00000019749	-	100	91.218	ENSCATG00000022394	VARS	100	91.218	Cercocebus_atys
ENSJJAG00000019749	-	93	85.216	ENSCLAG00000009470	VARS	96	85.133	Chinchilla_lanigera
ENSJJAG00000019749	-	100	91.456	ENSCSAG00000008784	VARS	100	91.456	Chlorocebus_sabaeus
ENSJJAG00000019749	-	77	73.073	ENSCPBG00000007943	VARS	96	73.176	Chrysemys_picta_bellii
ENSJJAG00000019749	-	100	91.377	ENSCANG00000033570	VARS	100	91.377	Colobus_angolensis_palliatus
ENSJJAG00000019749	-	100	91.139	ENSCGRG00001005686	Vars	100	91.851	Cricetulus_griseus_chok1gshd
ENSJJAG00000019749	-	92	85.846	ENSCGRG00000013352	Vars	78	86.600	Cricetulus_griseus_crigri
ENSJJAG00000019749	-	100	63.658	ENSCSEG00000019652	vars	100	64.054	Cynoglossus_semilaevis
ENSJJAG00000019749	-	100	64.591	ENSCVAG00000022398	vars	100	65.012	Cyprinodon_variegatus
ENSJJAG00000019749	-	100	63.707	ENSDARG00000044575	vars	100	63.969	Danio_rerio
ENSJJAG00000019749	-	84	91.063	ENSDORG00000016433	Vars	95	91.157	Dipodomys_ordii
ENSJJAG00000019749	-	68	85.353	ENSETEG00000003824	VARS	76	85.353	Echinops_telfairi
ENSJJAG00000019749	-	57	61.264	ENSEBUG00000004637	vars	100	61.538	Eptatretus_burgeri
ENSJJAG00000019749	-	50	70.236	ENSEBUG00000007086	vars	84	68.761	Eptatretus_burgeri
ENSJJAG00000019749	-	100	91.456	ENSEASG00005015673	VARS	100	92.089	Equus_asinus_asinus
ENSJJAG00000019749	-	100	91.304	ENSECAG00000014620	VARS	100	91.779	Equus_caballus
ENSJJAG00000019749	-	83	85.965	ENSEEUG00000004116	VARS	83	85.965	Erinaceus_europaeus
ENSJJAG00000019749	-	100	63.861	ENSELUG00000006550	vars	97	63.615	Esox_lucius
ENSJJAG00000019749	-	100	90.744	ENSFCAG00000004510	VARS	100	91.297	Felis_catus
ENSJJAG00000019749	-	83	88.934	ENSFDAG00000011401	VARS	100	88.934	Fukomys_damarensis
ENSJJAG00000019749	-	100	64.669	ENSFHEG00000010672	vars	100	65.244	Fundulus_heteroclitus
ENSJJAG00000019749	-	92	65.609	ENSGMOG00000014908	vars	97	65.835	Gadus_morhua
ENSJJAG00000019749	-	100	64.926	ENSGAFG00000021630	vars	100	65.241	Gambusia_affinis
ENSJJAG00000019749	-	92	65.520	ENSGACG00000009601	vars	98	65.362	Gasterosteus_aculeatus
ENSJJAG00000019749	-	50	64.501	ENSGAGG00000006508	-	91	64.025	Gopherus_agassizii
ENSJJAG00000019749	-	100	91.535	ENSGGOG00000011364	VARS	100	91.535	Gorilla_gorilla
ENSJJAG00000019749	-	100	64.103	ENSHBUG00000017151	vars	97	64.341	Haplochromis_burtoni
ENSJJAG00000019749	-	100	89.549	ENSHGLG00000011646	VARS	100	89.549	Heterocephalus_glaber_female
ENSJJAG00000019749	-	93	82.045	ENSHGLG00100018062	VARS	100	82.045	Heterocephalus_glaber_male
ENSJJAG00000019749	-	99	63.629	ENSHCOG00000012198	vars	99	63.869	Hippocampus_comes
ENSJJAG00000019749	-	100	64.230	ENSIPUG00000005218	vars	100	64.574	Ictalurus_punctatus
ENSJJAG00000019749	-	100	92.411	ENSSTOG00000013112	VARS	100	92.490	Ictidomys_tridecemlineatus
ENSJJAG00000019749	-	100	64.557	ENSKMAG00000009455	vars	100	64.557	Kryptolebias_marmoratus
ENSJJAG00000019749	-	100	63.953	ENSLBEG00000010341	vars	100	63.773	Labrus_bergylta
ENSJJAG00000019749	-	94	61.791	ENSLACG00000015232	VARS	99	61.873	Latimeria_chalumnae
ENSJJAG00000019749	-	100	65.752	ENSLOCG00000004240	vars	100	65.962	Lepisosteus_oculatus
ENSJJAG00000019749	-	100	90.736	ENSLAFG00000023090	VARS	100	90.736	Loxodonta_africana
ENSJJAG00000019749	-	100	91.456	ENSMFAG00000001032	VARS	100	91.456	Macaca_fascicularis
ENSJJAG00000019749	-	100	91.456	ENSMMUG00000006828	VARS	100	91.456	Macaca_mulatta
ENSJJAG00000019749	-	100	91.614	ENSMNEG00000042072	VARS	100	91.614	Macaca_nemestrina
ENSJJAG00000019749	-	100	91.297	ENSMLEG00000039307	VARS	100	91.297	Mandrillus_leucophaeus
ENSJJAG00000019749	-	100	63.931	ENSMAMG00000003949	vars	100	63.906	Mastacembelus_armatus
ENSJJAG00000019749	-	100	64.103	ENSMZEG00005018327	vars	100	63.715	Maylandia_zebra
ENSJJAG00000019749	-	100	90.902	ENSMAUG00000006715	Vars	100	91.614	Mesocricetus_auratus
ENSJJAG00000019749	-	100	90.744	ENSMICG00000003548	VARS	100	91.045	Microcebus_murinus
ENSJJAG00000019749	-	100	89.786	ENSMOCG00000015404	Vars	100	89.786	Microtus_ochrogaster
ENSJJAG00000019749	-	100	63.679	ENSMMOG00000015801	vars	100	63.758	Mola_mola
ENSJJAG00000019749	-	100	83.782	ENSMODG00000015204	-	100	83.782	Monodelphis_domestica
ENSJJAG00000019749	-	99	63.773	ENSMALG00000022532	vars	99	63.926	Monopterus_albus
ENSJJAG00000019749	-	100	92.162	MGP_CAROLIEiJ_G0021491	Vars	100	92.162	Mus_caroli
ENSJJAG00000019749	-	100	92.162	ENSMUSG00000007029	Vars	100	92.162	Mus_musculus
ENSJJAG00000019749	-	100	91.845	MGP_PahariEiJ_G0020486	Vars	100	91.845	Mus_pahari
ENSJJAG00000019749	-	100	92.241	MGP_SPRETEiJ_G0022396	Vars	100	92.241	Mus_spretus
ENSJJAG00000019749	-	100	91.456	ENSMPUG00000010821	VARS	100	91.930	Mustela_putorius_furo
ENSJJAG00000019749	-	78	90.992	ENSMLUG00000013126	VARS	100	91.498	Myotis_lucifugus
ENSJJAG00000019749	-	100	92.162	ENSNGAG00000012151	Vars	100	92.563	Nannospalax_galili
ENSJJAG00000019749	-	100	64.025	ENSNBRG00000020520	vars	100	64.264	Neolamprologus_brichardi
ENSJJAG00000019749	-	100	90.506	ENSNLEG00000006351	VARS	100	91.139	Nomascus_leucogenys
ENSJJAG00000019749	-	100	80.380	ENSMEUG00000011378	VARS	100	80.775	Notamacropus_eugenii
ENSJJAG00000019749	-	100	90.427	ENSOPRG00000003607	VARS	100	91.060	Ochotona_princeps
ENSJJAG00000019749	-	100	89.707	ENSODEG00000017681	VARS	100	89.707	Octodon_degus
ENSJJAG00000019749	-	100	64.425	ENSONIG00000013064	vars	99	67.767	Oreochromis_niloticus
ENSJJAG00000019749	-	83	72.662	ENSOANG00000005400	VARS	100	72.662	Ornithorhynchus_anatinus
ENSJJAG00000019749	-	100	88.538	ENSOCUG00000022463	VARS	100	88.617	Oryctolagus_cuniculus
ENSJJAG00000019749	-	100	64.429	ENSORLG00000013063	vars	100	64.593	Oryzias_latipes
ENSJJAG00000019749	-	100	65.039	ENSORLG00020003504	vars	100	65.275	Oryzias_latipes_hni
ENSJJAG00000019749	-	100	64.802	ENSORLG00015009001	vars	100	65.097	Oryzias_latipes_hsok
ENSJJAG00000019749	-	100	64.646	ENSOMEG00000015016	vars	100	64.938	Oryzias_melastigma
ENSJJAG00000019749	-	100	91.614	ENSOGAG00000007515	VARS	100	91.614	Otolemur_garnettii
ENSJJAG00000019749	-	100	90.902	ENSPPAG00000034012	VARS	100	91.535	Pan_paniscus
ENSJJAG00000019749	-	100	90.902	ENSPPRG00000014855	VARS	100	91.456	Panthera_pardus
ENSJJAG00000019749	-	85	91.357	ENSPTIG00000010462	VARS	95	92.110	Panthera_tigris_altaica
ENSJJAG00000019749	-	100	90.823	ENSPTRG00000017985	VARS	100	91.456	Pan_troglodytes
ENSJJAG00000019749	-	100	89.826	ENSPANG00000014565	VARS	100	89.826	Papio_anubis
ENSJJAG00000019749	-	100	63.186	ENSPKIG00000016304	vars	100	63.186	Paramormyrops_kingsleyae
ENSJJAG00000019749	-	100	65.087	ENSPMGG00000023909	vars	100	65.457	Periophthalmus_magnuspinnatus
ENSJJAG00000019749	-	100	91.693	ENSPEMG00000006639	Vars	100	92.326	Peromyscus_maniculatus_bairdii
ENSJJAG00000019749	-	100	83.782	ENSPCIG00000018553	VARS	100	83.782	Phascolarctos_cinereus
ENSJJAG00000019749	-	100	65.160	ENSPFOG00000015690	vars	100	65.474	Poecilia_formosa
ENSJJAG00000019749	-	100	65.406	ENSPLAG00000009590	vars	100	65.552	Poecilia_latipinna
ENSJJAG00000019749	-	100	65.160	ENSPMEG00000004708	vars	100	65.474	Poecilia_mexicana
ENSJJAG00000019749	-	100	63.278	ENSPREG00000013264	vars	100	63.199	Poecilia_reticulata
ENSJJAG00000019749	-	100	89.636	ENSPPYG00000016460	VARS	100	89.636	Pongo_abelii
ENSJJAG00000019749	-	86	88.869	ENSPCAG00000013565	VARS	86	88.869	Procavia_capensis
ENSJJAG00000019749	-	100	90.909	ENSPCOG00000010942	VARS	100	91.383	Propithecus_coquereli
ENSJJAG00000019749	-	100	87.737	ENSPVAG00000012403	VARS	100	87.737	Pteropus_vampyrus
ENSJJAG00000019749	-	100	64.103	ENSPNYG00000022511	vars	100	64.286	Pundamilia_nyererei
ENSJJAG00000019749	-	100	64.053	ENSPNAG00000020962	vars	100	63.861	Pygocentrus_nattereri
ENSJJAG00000019749	-	100	92.405	ENSRNOG00000000867	Vars	100	92.405	Rattus_norvegicus
ENSJJAG00000019749	-	100	91.456	ENSRBIG00000041669	VARS	100	91.456	Rhinopithecus_bieti
ENSJJAG00000019749	-	100	91.456	ENSRROG00000045490	VARS	100	91.456	Rhinopithecus_roxellana
ENSJJAG00000019749	-	100	90.585	ENSSBOG00000035402	VARS	100	91.218	Saimiri_boliviensis_boliviensis
ENSJJAG00000019749	-	100	79.183	ENSSHAG00000006937	VARS	100	79.419	Sarcophilus_harrisii
ENSJJAG00000019749	-	100	63.467	ENSSFOG00015014272	vars	97	70.863	Scleropages_formosus
ENSJJAG00000019749	-	100	62.937	ENSSMAG00000009596	vars	99	63.333	Scophthalmus_maximus
ENSJJAG00000019749	-	100	63.538	ENSSDUG00000014177	vars	100	63.777	Seriola_dumerili
ENSJJAG00000019749	-	100	63.615	ENSSLDG00000025316	vars	100	63.601	Seriola_lalandi_dorsalis
ENSJJAG00000019749	-	100	64.478	ENSSPAG00000017068	vars	100	64.509	Stegastes_partitus
ENSJJAG00000019749	-	100	89.881	ENSSSCG00000038950	VARS	100	90.356	Sus_scrofa
ENSJJAG00000019749	-	82	63.724	ENSTRUG00000012307	vars	98	64.054	Takifugu_rubripes
ENSJJAG00000019749	-	100	64.028	ENSTNIG00000008011	vars	100	64.012	Tetraodon_nigroviridis
ENSJJAG00000019749	-	53	95.131	ENSTBEG00000004728	-	60	95.131	Tupaia_belangeri
ENSJJAG00000019749	-	100	83.703	ENSTTRG00000014128	VARS	100	83.623	Tursiops_truncatus
ENSJJAG00000019749	-	100	87.568	ENSUAMG00000010424	VARS	100	87.784	Ursus_americanus
ENSJJAG00000019749	-	93	90.952	ENSUMAG00000013486	VARS	98	91.270	Ursus_maritimus
ENSJJAG00000019749	-	100	90.988	ENSVVUG00000021323	VARS	100	91.146	Vulpes_vulpes
ENSJJAG00000019749	-	96	62.156	ENSXETG00000024076	vars	96	62.654	Xenopus_tropicalis
ENSJJAG00000019749	-	100	65.142	ENSXCOG00000019172	vars	100	65.460	Xiphophorus_couchianus
ENSJJAG00000019749	-	100	64.848	ENSXMAG00000010927	vars	100	65.163	Xiphophorus_maculatus