EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSJJAG00000019934 (Gene tree)
Gene ID: 101606994
Gene Symbol: Snai3
Alias: Smuc|Snail-related gene from muscle cells|Zfp293
Full Name: snail family transcriptional repressor 3
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 7246 bases
Position: chrJH725523.1:8848032-8855277
Accession: 101606994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000018766	zf-C2H2	PF00096.26	2.5e-24	1	4
ENSJJAP00000018766	zf-C2H2	PF00096.26	2.5e-24	2	4
ENSJJAP00000018766	zf-C2H2	PF00096.26	2.5e-24	3	4
ENSJJAP00000018766	zf-C2H2	PF00096.26	2.5e-24	4	4
ENSJJAP00000018766	zf-met	PF12874.7	9.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000025299	-	879	XM_004666065	ENSJJAP00000018766	292 (aa)	XP_004666122	UPI0003331935

Gene Model

Click here to download ENSJJAG00000019934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000019934's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSJJAG00000019934	Snai3	58	35.075	ENSJJAG00000000816	Zfp319	79	35.075
ENSJJAG00000019934	Snai3	52	42.222	ENSJJAG00000020082	-	73	42.222
ENSJJAG00000019934	Snai3	51	38.739	ENSJJAG00000021785	Zfp574	51	38.655
ENSJJAG00000019934	Snai3	51	38.739	ENSJJAG00000013954	Zfp64	57	37.288
ENSJJAG00000019934	Snai3	59	39.815	ENSJJAG00000016355	Gfi1b	56	39.815
ENSJJAG00000019934	Snai3	54	40.299	ENSJJAG00000023633	Zfp672	88	40.299
ENSJJAG00000019934	Snai3	50	47.573	ENSJJAG00000011464	Prdm5	78	47.573
ENSJJAG00000019934	Snai3	99	46.622	ENSJJAG00000017495	-	99	48.649
ENSJJAG00000019934	Snai3	60	48.649	ENSJJAG00000017493	Zfp236	51	48.649
ENSJJAG00000019934	Snai3	50	48.052	ENSJJAG00000003567	Zfp768	52	46.226
ENSJJAG00000019934	Snai3	62	38.519	ENSJJAG00000000983	Zfp628	51	38.519
ENSJJAG00000019934	Snai3	53	41.111	ENSJJAG00000021900	-	55	39.552
ENSJJAG00000019934	Snai3	50	41.818	ENSJJAG00000014531	Zfp661	60	41.818
ENSJJAG00000019934	Snai3	76	40.876	ENSJJAG00000012972	Zfp709	75	40.876
ENSJJAG00000019934	Snai3	50	40.000	ENSJJAG00000011934	Zfp865	50	41.250
ENSJJAG00000019934	Snai3	52	43.269	ENSJJAG00000019878	Zfp1	59	43.269
ENSJJAG00000019934	Snai3	53	43.243	ENSJJAG00000014350	Zfp961	71	43.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000019934	Snai3	99	46.959	ENSG00000019549	SNAI2	99	47.973	Homo_sapiens
ENSJJAG00000019934	Snai3	100	75.685	ENSG00000185669	SNAI3	100	75.685	Homo_sapiens
ENSJJAG00000019934	Snai3	99	46.959	ENSAMEG00000009606	SNAI2	99	48.311	Ailuropoda_melanoleuca
ENSJJAG00000019934	Snai3	100	75.685	ENSANAG00000032748	SNAI3	100	75.685	Aotus_nancymaae
ENSJJAG00000019934	Snai3	99	47.297	ENSANAG00000021163	SNAI2	99	48.311	Aotus_nancymaae
ENSJJAG00000019934	Snai3	99	67.347	ENSBTAG00000017528	SNAI3	99	67.347	Bos_taurus
ENSJJAG00000019934	Snai3	99	47.973	ENSBTAG00000013227	SNAI2	99	48.311	Bos_taurus
ENSJJAG00000019934	Snai3	99	46.959	ENSCJAG00000013499	SNAI2	99	47.973	Callithrix_jacchus
ENSJJAG00000019934	Snai3	100	69.863	ENSCAFG00000029458	SNAI3	100	69.863	Canis_familiaris
ENSJJAG00000019934	Snai3	99	47.297	ENSCAFG00000006638	SNAI2	99	47.635	Canis_familiaris
ENSJJAG00000019934	Snai3	100	70.205	ENSCAFG00020004719	SNAI3	100	70.205	Canis_lupus_dingo
ENSJJAG00000019934	Snai3	99	47.297	ENSCAFG00020015384	SNAI2	99	47.635	Canis_lupus_dingo
ENSJJAG00000019934	Snai3	99	47.973	ENSCHIG00000024410	SNAI2	99	48.311	Capra_hircus
ENSJJAG00000019934	Snai3	99	68.027	ENSCHIG00000018087	SNAI3	99	68.027	Capra_hircus
ENSJJAG00000019934	Snai3	91	73.208	ENSTSYG00000025594	SNAI3	91	73.208	Carlito_syrichta
ENSJJAG00000019934	Snai3	53	66.875	ENSTSYG00000030892	SNAI2	60	66.875	Carlito_syrichta
ENSJJAG00000019934	Snai3	53	65.625	ENSCAPG00000013078	SNAI2	62	73.188	Cavia_aperea
ENSJJAG00000019934	Snai3	99	46.959	ENSCCAG00000024100	SNAI2	99	47.973	Cebus_capucinus
ENSJJAG00000019934	Snai3	100	75.685	ENSCATG00000031714	SNAI3	100	75.685	Cercocebus_atys
ENSJJAG00000019934	Snai3	99	46.959	ENSCATG00000028656	SNAI2	99	47.973	Cercocebus_atys
ENSJJAG00000019934	Snai3	99	46.959	ENSCLAG00000011797	SNAI2	99	48.649	Chinchilla_lanigera
ENSJJAG00000019934	Snai3	99	46.959	ENSCSAG00000014787	SNAI2	99	47.973	Chlorocebus_sabaeus
ENSJJAG00000019934	Snai3	100	71.233	ENSCSAG00000003047	SNAI3	100	71.233	Chlorocebus_sabaeus
ENSJJAG00000019934	Snai3	99	59.667	ENSCPBG00000023474	SNAI3	99	59.667	Chrysemys_picta_bellii
ENSJJAG00000019934	Snai3	99	46.622	ENSCPBG00000020255	SNAI2	99	47.440	Chrysemys_picta_bellii
ENSJJAG00000019934	Snai3	93	74.908	ENSCANG00000031124	SNAI3	83	74.908	Colobus_angolensis_palliatus
ENSJJAG00000019934	Snai3	99	46.959	ENSCANG00000029656	SNAI2	99	47.973	Colobus_angolensis_palliatus
ENSJJAG00000019934	Snai3	99	49.158	ENSCGRG00001013674	Snai2	99	49.495	Cricetulus_griseus_chok1gshd
ENSJJAG00000019934	Snai3	100	78.425	ENSCGRG00001011389	Snai3	100	77.740	Cricetulus_griseus_chok1gshd
ENSJJAG00000019934	Snai3	99	49.158	ENSCGRG00000012119	Snai2	99	49.495	Cricetulus_griseus_crigri
ENSJJAG00000019934	Snai3	100	78.425	ENSCGRG00000014932	Snai3	100	77.740	Cricetulus_griseus_crigri
ENSJJAG00000019934	Snai3	80	52.790	ENSDNOG00000035204	-	100	54.274	Dasypus_novemcinctus
ENSJJAG00000019934	Snai3	99	44.816	ENSDORG00000029620	Snai2	99	46.939	Dipodomys_ordii
ENSJJAG00000019934	Snai3	91	71.429	ENSEASG00005000614	SNAI3	95	67.128	Equus_asinus_asinus
ENSJJAG00000019934	Snai3	99	72.852	ENSECAG00000012131	SNAI3	99	72.852	Equus_caballus
ENSJJAG00000019934	Snai3	100	62.329	ENSEEUG00000000841	SNAI3	100	62.329	Erinaceus_europaeus
ENSJJAG00000019934	Snai3	99	48.110	ENSELUG00000018742	-	99	44.795	Esox_lucius
ENSJJAG00000019934	Snai3	99	47.440	ENSELUG00000021795	SNAI2	78	49.153	Esox_lucius
ENSJJAG00000019934	Snai3	100	66.096	ENSFCAG00000043885	SNAI3	100	66.096	Felis_catus
ENSJJAG00000019934	Snai3	99	46.959	ENSFDAG00000016958	SNAI2	99	48.311	Fukomys_damarensis
ENSJJAG00000019934	Snai3	99	46.622	ENSGAGG00000000426	SNAI2	99	47.440	Gopherus_agassizii
ENSJJAG00000019934	Snai3	99	59.864	ENSGAGG00000023571	SNAI3	99	59.864	Gopherus_agassizii
ENSJJAG00000019934	Snai3	99	46.959	ENSGGOG00000000959	SNAI2	99	47.973	Gorilla_gorilla
ENSJJAG00000019934	Snai3	100	76.027	ENSGGOG00000012559	SNAI3	100	76.027	Gorilla_gorilla
ENSJJAG00000019934	Snai3	99	48.966	ENSIPUG00000000131	snai2	99	48.966	Ictalurus_punctatus
ENSJJAG00000019934	Snai3	99	46.622	ENSSTOG00000028743	SNAI2	99	47.959	Ictidomys_tridecemlineatus
ENSJJAG00000019934	Snai3	99	47.945	ENSLOCG00000005992	SNAI2	99	48.123	Lepisosteus_oculatus
ENSJJAG00000019934	Snai3	99	45.659	ENSLAFG00000009299	SNAI2	99	47.099	Loxodonta_africana
ENSJJAG00000019934	Snai3	100	69.048	ENSLAFG00000005117	SNAI3	100	69.048	Loxodonta_africana
ENSJJAG00000019934	Snai3	99	46.959	ENSMFAG00000046061	SNAI2	99	47.973	Macaca_fascicularis
ENSJJAG00000019934	Snai3	100	76.027	ENSMFAG00000032064	SNAI3	100	76.027	Macaca_fascicularis
ENSJJAG00000019934	Snai3	100	76.027	ENSMMUG00000008716	SNAI3	100	76.027	Macaca_mulatta
ENSJJAG00000019934	Snai3	99	46.959	ENSMMUG00000016195	SNAI2	99	47.973	Macaca_mulatta
ENSJJAG00000019934	Snai3	100	76.370	ENSMNEG00000045515	SNAI3	100	76.370	Macaca_nemestrina
ENSJJAG00000019934	Snai3	99	46.959	ENSMNEG00000034216	SNAI2	99	47.973	Macaca_nemestrina
ENSJJAG00000019934	Snai3	93	74.908	ENSMLEG00000033191	SNAI3	93	74.908	Mandrillus_leucophaeus
ENSJJAG00000019934	Snai3	99	46.959	ENSMLEG00000034407	SNAI2	99	47.973	Mandrillus_leucophaeus
ENSJJAG00000019934	Snai3	100	78.425	ENSMAUG00000001685	Snai3	100	76.712	Mesocricetus_auratus
ENSJJAG00000019934	Snai3	99	47.297	ENSMAUG00000008119	Snai2	99	47.440	Mesocricetus_auratus
ENSJJAG00000019934	Snai3	100	79.452	ENSMOCG00000003536	Snai3	100	78.082	Microtus_ochrogaster
ENSJJAG00000019934	Snai3	99	49.495	ENSMOCG00000006622	Snai2	99	49.832	Microtus_ochrogaster
ENSJJAG00000019934	Snai3	99	44.951	ENSMODG00000010173	SNAI2	99	47.766	Monodelphis_domestica
ENSJJAG00000019934	Snai3	100	77.740	MGP_CAROLIEiJ_G0031662	Snai3	100	76.027	Mus_caroli
ENSJJAG00000019934	Snai3	99	47.297	MGP_CAROLIEiJ_G0020483	Snai2	99	49.147	Mus_caroli
ENSJJAG00000019934	Snai3	99	47.297	ENSMUSG00000022676	Snai2	99	49.147	Mus_musculus
ENSJJAG00000019934	Snai3	100	79.452	ENSMUSG00000006587	Snai3	100	77.740	Mus_musculus
ENSJJAG00000019934	Snai3	99	47.297	MGP_PahariEiJ_G0016188	Snai2	99	49.147	Mus_pahari
ENSJJAG00000019934	Snai3	100	78.840	MGP_PahariEiJ_G0023260	Snai3	100	77.133	Mus_pahari
ENSJJAG00000019934	Snai3	100	79.452	MGP_SPRETEiJ_G0032780	Snai3	100	77.740	Mus_spretus
ENSJJAG00000019934	Snai3	99	47.297	MGP_SPRETEiJ_G0021379	Snai2	99	49.147	Mus_spretus
ENSJJAG00000019934	Snai3	100	65.411	ENSMPUG00000008104	SNAI3	100	65.411	Mustela_putorius_furo
ENSJJAG00000019934	Snai3	99	46.959	ENSMPUG00000010793	SNAI2	99	48.311	Mustela_putorius_furo
ENSJJAG00000019934	Snai3	99	46.959	ENSMLUG00000001086	SNAI2	99	47.667	Myotis_lucifugus
ENSJJAG00000019934	Snai3	100	80.479	ENSNGAG00000023039	Snai3	100	80.479	Nannospalax_galili
ENSJJAG00000019934	Snai3	99	47.475	ENSNLEG00000013421	SNAI2	99	48.311	Nomascus_leucogenys
ENSJJAG00000019934	Snai3	100	76.027	ENSNLEG00000000595	SNAI3	100	76.027	Nomascus_leucogenys
ENSJJAG00000019934	Snai3	98	47.766	ENSMEUG00000009510	SNAI2	100	48.276	Notamacropus_eugenii
ENSJJAG00000019934	Snai3	99	44.951	ENSOANG00000007267	SNAI2	99	47.119	Ornithorhynchus_anatinus
ENSJJAG00000019934	Snai3	100	70.890	ENSOGAG00000000419	SNAI3	100	71.918	Otolemur_garnettii
ENSJJAG00000019934	Snai3	90	48.352	ENSOARG00000013069	-	99	48.352	Ovis_aries
ENSJJAG00000019934	Snai3	99	47.973	ENSOARG00000013030	SNAI2	99	48.311	Ovis_aries
ENSJJAG00000019934	Snai3	100	75.342	ENSPPAG00000043301	SNAI3	100	75.342	Pan_paniscus
ENSJJAG00000019934	Snai3	99	46.959	ENSPPAG00000015662	SNAI2	99	47.973	Pan_paniscus
ENSJJAG00000019934	Snai3	99	45.779	ENSPPRG00000012562	-	99	47.959	Panthera_pardus
ENSJJAG00000019934	Snai3	99	66.319	ENSPPRG00000008511	SNAI3	99	66.319	Panthera_pardus
ENSJJAG00000019934	Snai3	99	46.959	ENSPTRG00000020235	SNAI2	99	47.973	Pan_troglodytes
ENSJJAG00000019934	Snai3	100	75.342	ENSPTRG00000008460	SNAI3	100	75.342	Pan_troglodytes
ENSJJAG00000019934	Snai3	99	46.959	ENSPANG00000017540	SNAI2	99	47.973	Papio_anubis
ENSJJAG00000019934	Snai3	100	76.370	ENSPANG00000000509	SNAI3	100	76.370	Papio_anubis
ENSJJAG00000019934	Snai3	99	50.169	ENSPKIG00000002254	SNAI2	99	48.805	Paramormyrops_kingsleyae
ENSJJAG00000019934	Snai3	99	50.000	ENSPKIG00000007872	SNAI3	99	50.495	Paramormyrops_kingsleyae
ENSJJAG00000019934	Snai3	70	63.285	ENSPSIG00000004262	SNAI3	82	63.285	Pelodiscus_sinensis
ENSJJAG00000019934	Snai3	99	46.622	ENSPSIG00000016395	SNAI2	99	47.440	Pelodiscus_sinensis
ENSJJAG00000019934	Snai3	99	47.119	ENSPEMG00000011739	Snai2	99	47.458	Peromyscus_maniculatus_bairdii
ENSJJAG00000019934	Snai3	99	44.951	ENSPCIG00000025156	SNAI2	99	47.766	Phascolarctos_cinereus
ENSJJAG00000019934	Snai3	99	46.959	ENSPPYG00000018578	SNAI2	99	47.973	Pongo_abelii
ENSJJAG00000019934	Snai3	100	76.027	ENSPPYG00000007643	SNAI3	100	76.027	Pongo_abelii
ENSJJAG00000019934	Snai3	99	45.338	ENSPCOG00000015656	SNAI2	99	48.649	Propithecus_coquereli
ENSJJAG00000019934	Snai3	99	46.801	ENSPVAG00000009457	SNAI2	99	46.801	Pteropus_vampyrus
ENSJJAG00000019934	Snai3	100	80.479	ENSRNOG00000013586	Snai3	100	78.767	Rattus_norvegicus
ENSJJAG00000019934	Snai3	100	77.397	ENSRBIG00000025770	SNAI3	100	77.397	Rhinopithecus_bieti
ENSJJAG00000019934	Snai3	99	46.959	ENSRBIG00000041133	SNAI2	99	47.973	Rhinopithecus_bieti
ENSJJAG00000019934	Snai3	99	46.959	ENSRROG00000032273	SNAI2	99	47.973	Rhinopithecus_roxellana
ENSJJAG00000019934	Snai3	100	76.370	ENSRROG00000032757	SNAI3	100	76.370	Rhinopithecus_roxellana
ENSJJAG00000019934	Snai3	99	46.959	ENSSBOG00000035774	SNAI2	99	47.973	Saimiri_boliviensis_boliviensis
ENSJJAG00000019934	Snai3	99	44.951	ENSSHAG00000004205	SNAI2	99	47.766	Sarcophilus_harrisii
ENSJJAG00000019934	Snai3	99	48.039	ENSSFOG00015016115	snai3	93	46.006	Scleropages_formosus
ENSJJAG00000019934	Snai3	99	50.340	ENSSFOG00015018025	SNAI2	99	49.153	Scleropages_formosus
ENSJJAG00000019934	Snai3	99	46.980	ENSSPUG00000005427	-	99	47.811	Sphenodon_punctatus
ENSJJAG00000019934	Snai3	99	45.659	ENSSSCG00000039568	SNAI2	99	47.475	Sus_scrofa
ENSJJAG00000019934	Snai3	99	67.808	ENSTTRG00000006262	SNAI3	99	67.808	Tursiops_truncatus
ENSJJAG00000019934	Snai3	53	66.875	ENSUAMG00000014942	SNAI2	70	66.875	Ursus_americanus
ENSJJAG00000019934	Snai3	100	72.260	ENSUAMG00000020030	SNAI3	100	72.260	Ursus_americanus
ENSJJAG00000019934	Snai3	53	66.875	ENSUMAG00000006525	SNAI2	61	66.875	Ursus_maritimus
ENSJJAG00000019934	Snai3	100	70.548	ENSVVUG00000003233	SNAI3	100	70.548	Vulpes_vulpes
ENSJJAG00000019934	Snai3	99	46.959	ENSVVUG00000017625	SNAI2	99	47.297	Vulpes_vulpes
ENSJJAG00000019934	Snai3	99	47.619	ENSXETG00000024006	snai2	99	47.619	Xenopus_tropicalis