EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSJJAG00000019971 (Gene tree)
Gene ID: 101617056
Gene Symbol: Zc3h13
Alias: 2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Jaculus_jaculus
Status: putative
Strand: Minus strand
Length: 77679 bases
Position: chrJH725522.1:2930064-3007742
Accession: 101617056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSJJAP00000018858	zf-CCCH	PF00642.24	1.6e-07	1	1
ENSJJAP00000018850	zf-CCCH	PF00642.24	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSJJAT00000025383	-	4920	XM_004665870	ENSJJAP00000018850	1639 (aa)	XP_004665927	-
ENSJJAT00000025391	-	4857	-	ENSJJAP00000018858	1618 (aa)	-	-

Gene Model

Click here to download ENSJJAG00000019971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSJJAG00000019971's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSJJAG00000019971	Zc3h13	53	83.391	ENSAMEG00000013117	ZC3H13	52	83.678	Ailuropoda_melanoleuca
ENSJJAG00000019971	Zc3h13	73	77.147	ENSAPLG00000002707	ZC3H13	52	65.278	Anas_platyrhynchos
ENSJJAG00000019971	Zc3h13	53	83.716	ENSCAFG00020019269	ZC3H13	99	92.180	Canis_lupus_dingo
ENSJJAG00000019971	Zc3h13	52	80.326	ENSCHIG00000020072	ZC3H13	52	81.555	Capra_hircus
ENSJJAG00000019971	Zc3h13	52	82.114	ENSTSYG00000000992	ZC3H13	52	83.448	Carlito_syrichta
ENSJJAG00000019971	Zc3h13	60	92.035	ENSCHOG00000009724	ZC3H13	59	92.035	Choloepus_hoffmanni
ENSJJAG00000019971	Zc3h13	53	81.651	ENSDNOG00000005390	ZC3H13	52	82.775	Dasypus_novemcinctus
ENSJJAG00000019971	Zc3h13	52	84.908	ENSDORG00000000600	Zc3h13	53	85.253	Dipodomys_ordii
ENSJJAG00000019971	Zc3h13	53	84.447	ENSEASG00005017100	ZC3H13	52	84.509	Equus_asinus_asinus
ENSJJAG00000019971	Zc3h13	53	84.198	ENSECAG00000022843	ZC3H13	52	84.259	Equus_caballus
ENSJJAG00000019971	Zc3h13	53	83.123	ENSFCAG00000004877	ZC3H13	52	84.908	Felis_catus
ENSJJAG00000019971	Zc3h13	53	82.265	ENSFDAG00000012323	ZC3H13	52	82.204	Fukomys_damarensis
ENSJJAG00000019971	Zc3h13	84	51.691	ENSGACG00000015166	zc3h13	69	54.160	Gasterosteus_aculeatus
ENSJJAG00000019971	Zc3h13	68	59.248	ENSKMAG00000010701	zc3h13	60	47.175	Kryptolebias_marmoratus
ENSJJAG00000019971	Zc3h13	63	65.864	ENSLACG00000003806	ZC3H13	58	62.040	Latimeria_chalumnae
ENSJJAG00000019971	Zc3h13	53	68.807	ENSMGAG00000014996	ZC3H13	51	68.634	Meleagris_gallopavo
ENSJJAG00000019971	Zc3h13	52	83.641	MGP_CAROLIEiJ_G0019512	Zc3h13	79	92.927	Mus_caroli
ENSJJAG00000019971	Zc3h13	52	83.871	ENSMUSG00000022000	Zc3h13	79	92.398	Mus_musculus
ENSJJAG00000019971	Zc3h13	52	83.641	MGP_PahariEiJ_G0030530	Zc3h13	50	83.180	Mus_pahari
ENSJJAG00000019971	Zc3h13	52	83.756	MGP_SPRETEiJ_G0020407	Zc3h13	50	83.410	Mus_spretus
ENSJJAG00000019971	Zc3h13	53	82.245	ENSMPUG00000001602	ZC3H13	51	83.410	Mustela_putorius_furo
ENSJJAG00000019971	Zc3h13	53	80.827	ENSMLUG00000006920	ZC3H13	52	81.452	Myotis_lucifugus
ENSJJAG00000019971	Zc3h13	53	84.509	ENSODEG00000005178	ZC3H13	53	84.571	Octodon_degus
ENSJJAG00000019971	Zc3h13	100	77.443	ENSOCUG00000015173	ZC3H13	52	84.971	Oryctolagus_cuniculus
ENSJJAG00000019971	Zc3h13	52	79.254	ENSOARG00000007790	ZC3H13	52	80.372	Ovis_aries
ENSJJAG00000019971	Zc3h13	53	83.352	ENSPPRG00000005440	ZC3H13	52	84.793	Panthera_pardus
ENSJJAG00000019971	Zc3h13	53	81.401	ENSPTIG00000014867	ZC3H13	53	82.949	Panthera_tigris_altaica
ENSJJAG00000019971	Zc3h13	77	93.548	ENSPCAG00000001146	ZC3H13	77	91.532	Procavia_capensis
ENSJJAG00000019971	Zc3h13	69	83.564	ENSPVAG00000012353	ZC3H13	69	82.642	Pteropus_vampyrus
ENSJJAG00000019971	Zc3h13	52	82.778	ENSRNOG00000011237	Zc3h13	50	82.664	Rattus_norvegicus
ENSJJAG00000019971	Zc3h13	53	82.313	ENSRBIG00000010463	ZC3H13	53	83.618	Rhinopithecus_bieti
ENSJJAG00000019971	Zc3h13	53	83.411	ENSSSCG00000009414	ZC3H13	52	83.353	Sus_scrofa
ENSJJAG00000019971	Zc3h13	92	84.848	ENSTTRG00000003611	ZC3H13	92	85.276	Tursiops_truncatus
ENSJJAG00000019971	Zc3h13	53	80.827	ENSUMAG00000016220	ZC3H13	52	81.106	Ursus_maritimus
ENSJJAG00000019971	Zc3h13	84	90.909	ENSVPAG00000005179	ZC3H13	84	90.909	Vicugna_pacos
ENSJJAG00000019971	Zc3h13	93	62.125	ENSXETG00000014637	zc3h13	98	63.599	Xenopus_tropicalis